FFCP PHASE1:Hg19::chr3:12392932..12392962,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9236 | |||
|TSSclassifier=strong | |||
|UniProt=P37231 | |||
|association_with_transcript=-8bp_to_ENST00000287820,ENST00000477039_5end | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_8_at_PPARG_5end | |||
|id=chr3:12392932..12392962,+ | |||
|ontology_enrichment_celltype=CL:0002194!3.64e-40!63;CL:0000576!3.64e-40!63;CL:0000040!3.64e-40!63;CL:0000559!3.64e-40!63;CL:0002009!1.51e-38!65;CL:0000766!7.57e-37!76;CL:0000860!8.43e-36!45;CL:0000839!6.55e-35!70;CL:0000557!3.04e-34!71;CL:0002057!8.52e-32!42;CL:0000763!3.36e-23!112;CL:0000049!3.36e-23!112;CL:0000136!2.32e-18!15;CL:0002087!1.55e-17!119;CL:0000738!6.76e-16!140;CL:0002031!1.63e-14!124;CL:0000037!4.55e-12!172;CL:0000566!4.55e-12!172;CL:0002032!1.14e-11!165;CL:0000837!1.14e-11!165;CL:0000988!9.92e-11!182;CL:0000235!3.19e-08!10;CL:0002521!2.50e-07!3;CL:0002615!8.72e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.61e-44;33!CL:0002057;5.61e-44;33!CL:0000473;8.05e-39;39!CL:0000234;8.05e-39;39!CL:0000136;6.40e-34;13!CL:0000576;5.87e-19;48!CL:0000766;6.88e-17;69!CL:0002521;2.56e-12;3!CL:0002615;2.02e-11;3!CL:0000763;6.04e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.22e-41,48;CL:0000234,6.22e-41,48;CL:0002194,1.21e-40,59;CL:0000576,1.21e-40,59;CL:0000040,1.21e-40,59;CL:0000559,1.21e-40,59;CL:0002009,4.22e-39,61;CL:0000766,3.38e-37,72;CL:0000860,2.70e-36,42;CL:0002057,2.70e-36,42;CL:0000839,1.21e-35,66;CL:0000557,5.15e-35,67;CL:0000136,5.27e-29,15;CL:0000763,2.05e-22,108;CL:0000049,2.05e-22,108;CL:0002087,1.34e-17,115;CL:0002031,1.38e-16,120;CL:0000738,2.54e-16,136;CL:0002032,1.09e-12,161;CL:0000837,1.09e-12,161;CL:0002521,2.46e-12,3;CL:0000037,7.21e-12,168;CL:0002615,2.50e-11,3;CL:0000988,6.51e-11,177;CL:0000134,1.21e-08,354;CL:0002320,2.70e-08,361;CL:0000219,1.12e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.58e-28;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.27e-29!80;UBERON:0001474!3.97e-26!86;UBERON:0002405!1.28e-25!115;UBERON:0002193!6.16e-24!112;UBERON:0002390!1.09e-23!102;UBERON:0003061!1.09e-23!102;UBERON:0004765!1.14e-21!101;UBERON:0001434!1.14e-21!101;UBERON:0002204!2.33e-11!167;UBERON:0003081!3.07e-08!216;UBERON:0002190!2.50e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;2.56e-12;3!UBERON:0002072;1.52e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.40e-30,76;UBERON:0001474,2.16e-27,82;UBERON:0004765,2.33e-24,90;UBERON:0002405,2.35e-23,93;UBERON:0002390,8.07e-22,98;UBERON:0003061,8.07e-22,98;UBERON:0001434,3.01e-21,100;UBERON:0002193,3.56e-19,108;UBERON:0002190,2.46e-12,3;UBERON:0002204,5.15e-12,167;UBERON:0003081,1.08e-08,203;UBERON:0002384,1.59e-08,371;UBERON:0000926,2.45e-08,315;UBERON:0004120,2.45e-08,315;UBERON:0006603,2.45e-08,315;UBERON:0002072,1.49e-07,5 | |||
|phase1_expression=0.908391896352783,9.42042305120326,4.65149533516705,1.0007329835313,4.46961094427288,0,10.1319951267324,3.79031924056099,12.0145388971926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.767658796194425,1.08371286321253,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0.581592955118259,1.13362783106643,0.727752183563449,7.90258725479328,6.16751832032739,7.74265927237759,2.3015391385772,3.07392847834921,4.7296445977717,5.86067657252252,3.87290810150296,5.41705946377367,3.76484679085209,3.27487380069415,3.82029923556644,2.14258724659632,4.8139354061414,7.67204550958849,0.329851300186716,0.398927315243264,0.426224750532694,0,1.70215567407342,0,2.76373531782418,2.60741459210101,4.56096573880745,0,3.31449872388808,1.89877432464531,0,0,0,0.44931452458598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,6.49094787309367,6.09454080547435,5.7171923023112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,2.94848165003288,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,6.31811515875942,1.48631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0.447352215784832,0.667396566847634,0,0,0,0,0,0,0,8.49747439776985,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,1.1837208676432,0,0,0,0,0,0,0,16.6749902350003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,1.24251839046515,0.246346371159628,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52076466412852,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0,0,0,0,2.99004755189545,0,7.04206394090232,0.496166021811951,0,0,0,27.2008901684737,51.8928080626989,30.9409032531096,31.803645178851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,2.3196288626764,6.79995390282795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.714193294391221,0,0.0620747142958579,0,0,0.202117188958219,0.435433495793923,0,0.134704106029175,0.215166616178029,0,0,0.106727345877715,0,0,0,0,0,0.665756774185513,2.81783311027437,0 | |||
|short_description=p8@PPARG | |||
}} |
Revision as of 17:26, 21 January 2014
Short description: | p8@PPARG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PPARG_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -8bp_to_ENST00000287820, ENST00000477039_5end |
EntrezGene: | PPARG |
HGNC: | 9236 |
UniProt: | P37231 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.22e-41 | 48 |
phagocyte | 6.22e-41 | 48 |
monopoietic cell | 1.21e-40 | 59 |
monocyte | 1.21e-40 | 59 |
monoblast | 1.21e-40 | 59 |
promonocyte | 1.21e-40 | 59 |
macrophage dendritic cell progenitor | 4.22e-39 | 61 |
myeloid leukocyte | 3.38e-37 | 72 |
classical monocyte | 2.70e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.70e-36 | 42 |
myeloid lineage restricted progenitor cell | 1.21e-35 | 66 |
granulocyte monocyte progenitor cell | 5.15e-35 | 67 |
fat cell | 5.27e-29 | 15 |
myeloid cell | 2.05e-22 | 108 |
common myeloid progenitor | 2.05e-22 | 108 |
nongranular leukocyte | 1.34e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 1.38e-16 | 120 |
leukocyte | 2.54e-16 | 136 |
hematopoietic oligopotent progenitor cell | 1.09e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-12 | 161 |
subcutaneous fat cell | 2.46e-12 | 3 |
hematopoietic stem cell | 7.21e-12 | 168 |
adipocyte of omentum tissue | 2.50e-11 | 3 |
hematopoietic cell | 6.51e-11 | 177 |
mesenchymal cell | 1.21e-08 | 354 |
connective tissue cell | 2.70e-08 | 361 |
motile cell | 1.12e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.40e-30 | 76 |
bone element | 2.16e-27 | 82 |
skeletal element | 2.33e-24 | 90 |
immune system | 2.35e-23 | 93 |
hematopoietic system | 8.07e-22 | 98 |
blood island | 8.07e-22 | 98 |
skeletal system | 3.01e-21 | 100 |
hemolymphoid system | 3.56e-19 | 108 |
subcutaneous adipose tissue | 2.46e-12 | 3 |
musculoskeletal system | 5.15e-12 | 167 |
lateral plate mesoderm | 1.08e-08 | 203 |
connective tissue | 1.59e-08 | 371 |
mesoderm | 2.45e-08 | 315 |
mesoderm-derived structure | 2.45e-08 | 315 |
presumptive mesoderm | 2.45e-08 | 315 |
hypodermis | 1.49e-07 | 5 |