FFCP PHASE1:Hg19::chr3:11685235..11685246,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9686 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28966 | |||
|TSSclassifier=strong | |||
|UniProt=G5E9M7,Q14135 | |||
|association_with_transcript=151bp_to_ENST00000430365,NM_001128219,uc010hdx.1_5end | |||
|description=CAGE_peak_15_at_VGLL4_5end | |||
|id=chr3:11685235..11685246,- | |||
|ontology_enrichment_celltype=CL:0002139!4.64e-07!24 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.27e-07;3!UBERON:0003057;1.27e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.23e-16!86;UBERON:0001017!4.12e-16!82;UBERON:0000073!1.63e-15!94;UBERON:0001016!1.63e-15!94;UBERON:0007023!1.70e-14!115;UBERON:0001049!2.67e-14!57;UBERON:0005068!2.67e-14!57;UBERON:0006241!2.67e-14!57;UBERON:0007135!2.67e-14!57;UBERON:0002346!5.86e-13!90;UBERON:0002616!2.46e-12!59;UBERON:0003075!2.54e-12!86;UBERON:0007284!2.54e-12!86;UBERON:0000955!4.47e-12!69;UBERON:0006238!4.47e-12!69;UBERON:0002780!1.22e-10!41;UBERON:0001890!1.22e-10!41;UBERON:0006240!1.22e-10!41;UBERON:0001893!1.85e-10!34;UBERON:0002791!2.72e-10!33;UBERON:0002020!2.72e-10!34;UBERON:0003528!2.72e-10!34;UBERON:0003080!5.05e-10!42;UBERON:0001869!2.09e-09!32;UBERON:0000477!2.89e-08!286;UBERON:0000025!5.24e-08!194;UBERON:0003056!9.27e-08!61;UBERON:0004111!1.93e-07!241;UBERON:0000956!2.62e-07!25;UBERON:0000203!2.62e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.27e-07;3!UBERON:0005174;1.27e-07;3!UBERON:0001137;1.27e-07;3!UBERON:0004151;3.36e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.62e-09,81;UBERON:0002240,1.82e-07,3;UBERON:0005174,1.82e-07,3;UBERON:0001137,1.82e-07,3;UBERON:0001016,1.86e-07,89;UBERON:0004151,2.69e-07,3;UBERON:0001049,8.65e-07,56;UBERON:0005068,8.65e-07,56;UBERON:0006241,8.65e-07,56;UBERON:0007135,8.65e-07,56 | |||
|phase1_expression=1.81678379270557,0.642301571672949,0.845726424575827,0,0.446961094427288,0,0,0,0,0,0,0,0,0.37129905888014,0.662794751455832,0.672325146451775,0,0,0.975865597581014,0.984968464614303,0.204000691244253,0.940364164434263,2.0036519099174,0.821246550437305,0.753255837568817,0.152826811495903,0.0821005894499457,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,2.01384674625505,3.33008918487831,1.89185783910868,0.344745680736619,0,0,0,0,0,0.612167784741805,0.320929027076094,0,6.92687730392104,3.19141852194611,4.26224750532694,0,0,0,1.00499466102697,2.60741459210101,1.08594422352558,0,0,0.316462387440884,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0,0.534880391567015,0.144824403882799,2.43806866313962,0.670700859703636,0.511450247374121,0,0.50133791063589,0.579386075843295,2.3858578411533,0.973269740605272,0.850813354476611,0.221729397462564,0.614843499851882,0.654895377488563,0,0,0,0,0.132957960518865,0,0,0,0.39752481473341,0,1.04142150482278,0.56530794192401,0.838998872419812,0.550236083880135,1.04497483268405,0.516833518338658,0.35576626268671,1.33888245105868,0.805658634218294,0,0.488124115096339,0,0.81014194788176,1.16089646769304,1.12264686313085,0.788280363383256,3.06633274931766,0.949265659568129,0.549605231791222,0,0,0,0,0,1.32409180813219,0,0,0,0,0,0.311211035399766,0.67355336034844,0.163461903113459,0.756787138224657,1.15235184896,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0.150238058906597,0.226864366320042,0,0.213557388818567,0,0,0,0.772921620136887,0,1.85653965465393,0.292311015483596,0.252433774244115,0.368199594569197,0.161646056818812,0.355009592516614,0,0.339121184620975,0.193260853163297,0,0,0,0,0.464775771478074,0.621966330092223,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0,0.435758888184812,0,0.269662616320329,0,0,0,0,0.4115740113314,0,0,0,1.18157981336281,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0.695582429850461,0.70445216541493,1.58803092537181,1.85194205030644,1.33177906564219,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0.207328115540772,0.288239906833923,0.37872730027914,0.380987365753014,0.381988425558278,1.17217447210047,1.71072446022705,0,0,0.285826432630578,0,0.43596006883328,0.1466765716419,0.904902010304444,3.57656445851882,0,0.26593811658487,0,0.514414748524284,0,0.266422179016099,0.57191197463259,1.62786481617433,0,0.325736184293735,0,0,0.602878754119172,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0.289562613335158,0,0.537182889719687,0,0.197030760201927,0.215627574859517,0,6.35236560556159,2.60279707715243,2.31986643833309,0.837581326671744,2.55175500661265,0,0,0,0.736148950314839,1.00034104211935,0,0.415941723061614,0.178428988797162,0.157702415033935,0.117141414992713,0.902838299183157,0,1.03473071292505,0,0.368738337083406,0.0868836144680828,1.37060810223918,1.37257369524342,0.413536052245775,0.431428401637234,0,0,0,0,0.744323423456331,2.30192959932094,0.561320188866147,0.768834895534206,1.53512174720011,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.316654886678627,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0.261435451024901,0,0.656029291399411,0.325378394664303,0.412164046590889,0.27470839445503,0.495056999523528,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0.15350367472613,0.137836572484531,0.644521469209642,0.145016693914229,0.0852266274161009,0.534192213880424,0,0,0,0,0.464845549297286,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0.359744915166629,0.823611089208164,0.235624804691373,0,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0.655894752046633,0.202910376962704,0.6196469961995,0,0.573645408816206,0.0982490410131212,1.07001315444375,0,1.47775344708365,0,0,0.349934720244983,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.534120355637366,0,0,0.371606350251437,0.144269212976445,0.0711418433484141,0.159426272728822,0.399158742865633,0,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,1.01575066680962,0,0.201799707191048,0,0.343505344755765,0.614481528616916,0,0.166849141711909,0.19538809540204,0,0,0,0.33307196799782,1.4098700508785,0,0.879049075631364,0.36408156524854,0.66866030566487,0,0,0,0,0,1.40669416410513,0.667852230137435,0.659215496907038,0.422250816255987,1.59398390600856,0.552567831062295,0.251932747854276,0.409074730008619,0.246169610922139,0,0,0,0,0.690503839458535,0,0,0.969332746095218,0.834912883456661,0,0,0.0874599999961957,0,0,0.254253650292766,0,0.344743373241465,0.291604613383254,0.694499979733169,0.885741385813839,0.60298219312704,0,0.552896299656123,0.591095237907095,0,0,0,1.00035336054936,0.91153644677601,0,0,0,0.638002319463839,0.0915975934018623,0,0,0.31396051279005,0.166211681900156,0,0.19606253431774,0.167821586975843,0,0.317873157960757,0,0.163232808159148,0,0.216388639742091,0.995261931078505,0.707660516026713,0.611030144933625,0.593042257361244,0.247127877893006,0.417687798021821,1.34802265961354,2.40773294189637,0.234264445725339,0,0,0.242780379534093,0.789168805698781,1.20990716048664,1.53036380815245,2.21153028699708,0,0.207376382794494,1.32930774541437,0.661983911750998,0,0,0,0,0,0,0,1.22308667769421,0.171986032471617,0.19351266257817,0,0,0.581934098930517,0.176512253383001,0.225980740780532,0.411125773940253,0.19871461170299,0.696418755514666,0,0.0801588202515337,0.640358984218058,0.39961921916426,0,1.14536596165916,0.171594997861965,0.14405479798815,0.49701014226173,0,0.271808412147228,0.313808538937,0.101998217636322,1.44475294950759,1.20084057741958,0.821432273351958,1.27746588066972,0.429765441419957,0.262887354279314,1.39641200636127,0,1.43574604915363,0.199679000498991,0,0.446342914883745,0.806201669840715,0.360299883542404,0,0.236349546921671,0.164831716762333,0.202210631562555,0.0984274815147488,0,3.97614844904652,0.953423842781029,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.546746009922222,0,0.236417121897595,0.996637174564964,0.211200673038813,0,0.191915197319445,2.85878130549347,1.32418394073086,0.25426853765475,0,0,0,0,0.246277562248017,0,0.113312091520126,0.439656701034247,1.32506888912221,0.387848869084652,0.92562821219883,0,0,0.213574825135389,0.628817220398664,0.414239055347196,0.496166021811951,0,0,1.27668251554036,1.08803560673895,1.5041393641362,0,0.327872630709804,0.785270481251171,0,0.854183854313742,1.3771002377715,1.72022758707021,0.998361463831671,0.807253238237985,0,0,0.454947352624943,0.285465333544967,0,0,0,0.149254802886874,0,0,0.378806010550178,0.50313580350515,1.77962244319307,0,0.604923695052956,0.310874401165561,0.147855149989634,0.159296767163702,0.449803112163605,0,0,0,0.521745061811734,0.300515217994437,0.761610424337591,0,0,0.107410557042488,0,0.398095888698616,0.400027764663154,1.03018711554838,0,0,0.385239660814607,1.50109113962448,0,0.226705925512272,0,0,0.358177682162975,0,0,0,0.38582807654183,0.337884881306145,0,0,0,0.691292180758654,0.194860308839388,0,0.654261577023377,0.655219697692825,0,0,0.59996218756479,0,0.172214979660816,0,0,0,0,0.127894371303652,0.323474434190045,0.314531883711793,0.436838552768056,0,0.850299680406731,0.619678821295011,0,0.318004350653419,0,0,0,0.6124909547064,0.449604575675217,1.41696576325585,1.59633859057151,0,0.504143392443436,0.414943514785307,0.807378228159255,0,0.0981477185010256,0,0,0,0,0.690359926060101,0.596748666348824,0.676892955143315,0.60511520611056,0,0,0.327543835020193,0,0.472763092328763,0,1.65349437200947,0.634158101939068,0.546974809018219,0.548257766857182,1.98484471355718,1.75871244359621,0.255524855279191,0,0.672567444437648,0,0.682986574053893,0.0887023701626388,0,1.02892805662451,0.475788130837822,0.526182188502793,0,0.333694205676207,0.39246546425257,0.628462359664008,0,0.913158720509496,0.215927591218621,0,1.00067161847319,0.316027223465453,0.813689977576877,0.347716544605159,0.801711364730253,0,0.17071847709395,0,0,0.354996002191696,0.0852134047591577,1.27016115057279,0,0,0,0,0.294450700845729,0.121917924982269,0,0.410651227424988,0,1.94284397223656,0.467878926924211,1.39265542612958,0,0.67767649223376,0,0.301925687133347,0.308696632431779,0,0,0.735444965261716,0,2.1593931382644,1.18818560130834,2.5359343655004,0.169927114687817,0.469919589899268,1.86927875123374,0,0,0,0,2.19100916473955,0.458729283404541,1.57673541466596,0.473314686579554,0.679914901909147,0.872701380680755,0,0,0,0,0.252332849670158,0.218531143927391,0.126698501011437,0,0,0,0,0.303114792872958,0,0.829169439458779,1.86179392551411,0.639701945702943,1.42838658878244,0.322944549180031,0.682821857254437,0.112131862580613,1.14564884900697,0.808468755832877,0.217716747896961,1.02669990325584,0.202056159043763,0.358611026963382,2.32862249582209,0.407016343054873,0.640364075266293,0,0,2.34640942403454,0.855690109280065,1.62758471326295,0.665756774185513,0.603821380773079,0 | |||
|short_description=p15@VGLL4 | |||
}} |
Revision as of 17:23, 21 January 2014
Short description: | p15@VGLL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_VGLL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 151bp_to_ENST00000430365, NM_001128219, uc010hdx.1_5end |
EntrezGene: | VGLL4 |
HGNC: | 28966 |
UniProt: | G5E9M7Q14135 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.62e-09 | 81 |
spinal cord | 1.82e-07 | 3 |
dorsal region element | 1.82e-07 | 3 |
dorsum | 1.82e-07 | 3 |
nervous system | 1.86e-07 | 89 |
cardiac chamber | 2.69e-07 | 3 |
neural tube | 8.65e-07 | 56 |
neural rod | 8.65e-07 | 56 |
future spinal cord | 8.65e-07 | 56 |
neural keel | 8.65e-07 | 56 |