FFCP PHASE1:Hg19::chr3:11685215..11685224,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9686 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28966 | |||
|TSSclassifier=strong | |||
|UniProt=G5E9M7,Q14135 | |||
|association_with_transcript=173bp_to_ENST00000430365,NM_001128219,uc010hdx.1_5end | |||
|description=CAGE_peak_18_at_VGLL4_5end | |||
|id=chr3:11685215..11685224,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.87e-14;2!CL:0000511;1.43e-07;1!CL:0002625;1.43e-07;1!CL:0000216;1.43e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,7.76e-08,1;CL:0002625,7.76e-08,1;CL:0000216,7.76e-08,1;CL:0000047,9.04e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.43e-07;1!UBERON:0010115;1.43e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.12e-22!94;UBERON:0001016!4.12e-22!94;UBERON:0001017!8.61e-22!82;UBERON:0005743!2.91e-21!86;UBERON:0001049!1.52e-19!57;UBERON:0005068!1.52e-19!57;UBERON:0006241!1.52e-19!57;UBERON:0007135!1.52e-19!57;UBERON:0003075!2.01e-19!86;UBERON:0007284!2.01e-19!86;UBERON:0002346!2.87e-19!90;UBERON:0002616!1.67e-17!59;UBERON:0000955!3.15e-17!69;UBERON:0006238!3.15e-17!69;UBERON:0007023!1.53e-16!115;UBERON:0001893!2.42e-13!34;UBERON:0002020!2.43e-13!34;UBERON:0003528!2.43e-13!34;UBERON:0002791!3.07e-13!33;UBERON:0003080!5.52e-13!42;UBERON:0002780!2.22e-12!41;UBERON:0001890!2.22e-12!41;UBERON:0006240!2.22e-12!41;UBERON:0001869!4.55e-12!32;UBERON:0000924!1.81e-11!173;UBERON:0006601!1.81e-11!173;UBERON:0004121!2.50e-11!169;UBERON:0003056!3.16e-10!61;UBERON:0000025!6.82e-10!194;UBERON:0000956!6.24e-09!25;UBERON:0000203!6.24e-09!25;UBERON:0000153!7.20e-09!129;UBERON:0007811!7.20e-09!129;UBERON:0000033!9.91e-09!123;UBERON:0003076!4.68e-08!15;UBERON:0003057!4.68e-08!15;UBERON:0002619!4.82e-08!22;UBERON:0004111!8.62e-08!241;UBERON:0000477!9.87e-08!286;UBERON:0002420!8.35e-07!9;UBERON:0007245!8.35e-07!9;UBERON:0010009!8.35e-07!9;UBERON:0010011!8.35e-07!9;UBERON:0000454!8.35e-07!9;UBERON:0001950!8.41e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002081;1.84e-13;2!UBERON:0004151;2.86e-09;3!UBERON:0002363;1.43e-07;1!UBERON:0002079;1.43e-07;1!UBERON:0002134;1.43e-07;1!UBERON:0001136;1.43e-07;1!UBERON:0001343;1.43e-07;1!UBERON:0005208;1.43e-07;1!UBERON:0004910;1.43e-07;1!UBERON:0004145;1.43e-07;1!UBERON:0005946;1.43e-07;1!UBERON:0004813;1.43e-07;1!UBERON:0005965;1.43e-07;1!UBERON:0002078;1.43e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,1.27e-13,2;UBERON:0010227,1.27e-13,2;UBERON:0001017,2.33e-10,81;UBERON:0004151,2.23e-09,3;UBERON:0001016,4.22e-09,89;UBERON:0001136,7.76e-08,1;UBERON:0001343,7.76e-08,1;UBERON:0004910,7.76e-08,1;UBERON:0005154,7.76e-08,1;UBERON:0005295,7.76e-08,1;UBERON:0004813,7.76e-08,1;UBERON:0005297,7.76e-08,1;UBERON:0005294,7.76e-08,1;UBERON:0010141,7.76e-08,1;UBERON:0005891,7.76e-08,1;UBERON:0002134,1.15e-07,1;UBERON:0005208,1.15e-07,1;UBERON:0005946,1.15e-07,1;UBERON:0005965,1.15e-07,1;UBERON:0002078,1.15e-07,1;UBERON:0002079,1.22e-07,1;UBERON:0002363,2.31e-07,1;UBERON:0007645,2.31e-07,1;UBERON:0007647,2.31e-07,1;UBERON:0010115,2.31e-07,1 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0.369363174230364,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.376627918784408,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0.671746422719773,0,0.257575567634187,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0,0.863077176966451,1.0246428261164,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,3.29851300186716,0.598390972864896,2.55734850319616,0,0,0,0.75374599577023,0,0.868755378820466,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.534880391567015,0,2.43806866313962,0,0.383587685530591,0,0.50133791063589,0,0,0.486634870302636,0.472674085820339,0.221729397462564,0.351339142772504,0.327447688744282,0,0,0,0,0,0.476981248610684,0,0,0,0,0,0.56530794192401,0,0.275118041940067,0.208994966536811,0.258416759169329,0,0.33472061276467,0,1.52054421143703,0.488124115096339,0,0.81014194788176,0.267899184852239,0.44905874525234,0.112611480483322,0,0,0,0,0,0,0,0,0.529636723252875,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0.151357427644931,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0.423863802319124,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.231860809950154,0.469634776943287,0.288732895522148,0,0.570762456703795,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0.904318131178758,0,0.199945982364114,1.2162378064119,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0,0,1.52456774533478,2.60279707715243,0.773288812777695,0.502548796003046,1.27587750330633,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0.306923946576125,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,0,0,0.229628896329213,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0.247528499761764,0,0,1.6068392984416,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0,0,0.267096106940212,0,0,0.127612712494584,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0.404364963146632,0,0,0,0.487426979262569,1.05650146756755,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0.144269212976445,0,0,0.199579371432817,0.191505370132367,0,0.324621940274555,0,0.456469358066384,0,0,0.169291777801603,0.321176150207399,0,0,0,0,0,0,0,0.278406173895242,0,0,0,1.4098700508785,0,0.146508179271894,0.121360521749513,0.222886768554957,0,0,0,0,0.994147647766298,0.562677665642051,0.111308705022906,0.16480387422676,0.211125408127993,0.19924798825107,0.828851746593443,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0,0.556608588971108,0,0,0,0.724999575434793,0,0,0,0,0,0,2.65722415744152,0.120596438625408,0,0.663475559587348,0.591095237907095,0.219385397153973,0,0,0.923403102045565,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0.296521128680622,0.123563938946503,0.104421949505455,0.741412462787447,0,0.234264445725339,0,0,0,0,0,0.61214552326098,1.0741718536843,0.150323419414493,0,0,0.661983911750998,0.627865836814451,0,0,0,0,0,0,0.52418000472609,0.343972064943233,0,0,0,0.193978032976839,0.0882561266915003,0.225980740780532,0,0,0.126621591911757,0,0.0801588202515337,0.640358984218058,0,0,0.572682980829578,0.171594997861965,0,0.124252535565433,0.235694034616795,0.407712618220842,0.313808538937,0.101998217636322,0.288950589901519,1.80126086612937,0.821432273351958,0,0,0,0.558564802544508,0.229160424011684,1.43574604915363,0.399358000997982,0,0.446342914883745,0.335917362433631,0.360299883542404,0,0,0.0824158583811665,0.13480708770837,0,0.0846733320657845,1.59045937961861,0.544813624446302,0,0,0,0,0,0.121499113316049,0,0.315222829196793,0.262272940674991,0.316801009558219,0.179287339332845,0,1.42939065274673,0,0,0,0,0,0,0.246277562248017,0,0.339936274560377,0,0,0.775697738169303,0.13223260174269,0,0,0,1.10043013569766,0.414239055347196,0.496166021811951,0.395223263795889,0,0,0,1.0027595760908,0.919036730290385,1.31149052283922,0.471162288750703,0.886068179966986,0.366078794705889,0.3755727921195,1.14681839138014,0.5546452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| |||
|short_description=p18@VGLL4 | |||
}} |
Revision as of 17:23, 21 January 2014
Short description: | p18@VGLL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_VGLL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 173bp_to_ENST00000430365, NM_001128219, uc010hdx.1_5end |
EntrezGene: | VGLL4 |
HGNC: | 28966 |
UniProt: | G5E9M7Q14135 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 7.76e-08 | 1 |
seminiferous tubule epithelial cell | 7.76e-08 | 1 |
Sertoli cell | 7.76e-08 | 1 |
neuronal stem cell | 9.04e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 1.27e-13 | 2 |
future cardiac atrium | 1.27e-13 | 2 |
central nervous system | 2.33e-10 | 81 |
cardiac chamber | 2.23e-09 | 3 |
nervous system | 4.22e-09 | 89 |
mesothelium | 7.76e-08 | 1 |
seminiferous tubule of testis | 7.76e-08 | 1 |
epithelium of male gonad | 7.76e-08 | 1 |
epithelial cord | 7.76e-08 | 1 |
sex cord | 7.76e-08 | 1 |
seminiferous tubule epithelium | 7.76e-08 | 1 |
testis sex cord | 7.76e-08 | 1 |
genital ridge | 7.76e-08 | 1 |
primitive sex cord of indifferent gonad | 7.76e-08 | 1 |
coelomic epithelium | 7.76e-08 | 1 |
tricuspid valve | 1.15e-07 | 1 |
right atrium valve | 1.15e-07 | 1 |
outflow tract of atrium | 1.15e-07 | 1 |
outflow part of right atrium | 1.15e-07 | 1 |
right cardiac atrium | 1.15e-07 | 1 |
left cardiac atrium | 1.22e-07 | 1 |
dura mater | 2.31e-07 | 1 |
future meninx | 2.31e-07 | 1 |
ectomeninx | 2.31e-07 | 1 |
future dura mater | 2.31e-07 | 1 |