FFCP PHASE1:Hg19::chr22:50970898..50970917,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440836 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34388 | |||
|TSSclassifier=strong | |||
|UniProt=A8MYP8,A1L1A8 | |||
|association_with_transcript=90bp_to_ENST00000329363,NM_001014440,uc003bmh.2_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_8_at_ODF3B_5end | |||
|id=chr22:50970898..50970917,- | |||
|ontology_enrichment_celltype=CL:0002057!1.64e-44!42;CL:0000860!2.76e-40!45;CL:0000766!3.06e-37!76;CL:0000738!4.11e-31!140;CL:0002009!1.07e-30!65;CL:0000557!4.69e-30!71;CL:0002194!2.29e-29!63;CL:0000576!2.29e-29!63;CL:0000040!2.29e-29!63;CL:0000559!2.29e-29!63;CL:0000839!4.68e-28!70;CL:0000763!2.99e-25!112;CL:0000049!2.99e-25!112;CL:0000037!2.57e-22!172;CL:0000566!2.57e-22!172;CL:0000988!9.48e-22!182;CL:0002087!3.48e-21!119;CL:0002031!1.74e-20!124;CL:0002032!4.71e-20!165;CL:0000837!4.71e-20!165;CL:0000094!6.57e-10!8;CL:0002393!7.96e-10!9;CL:0002397!7.96e-10!9;CL:0000081!3.03e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-63;33!CL:0002057;1.11e-63;33!CL:0000473;2.59e-46;39!CL:0000234;2.59e-46;39!CL:0000576;2.42e-42;48!CL:0000766;1.51e-30;69!CL:0000094;3.07e-18;8!CL:0000081;8.53e-16;11!CL:0002393;1.08e-13;6!CL:0002397;1.08e-13;6!CL:0002087;2.67e-13;104!CL:0000763;3.61e-13;100!CL:0000738;3.44e-11;136!CL:0000775;1.66e-08;3!CL:0000226;3.78e-07;3!CL:0000842;3.78e-07;3!CL:0000988;5.62e-07;177!CL:0000767;6.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.50e-80,42;CL:0002057,8.50e-80,42;CL:0000473,1.75e-71,48;CL:0000234,1.75e-71,48;CL:0000766,1.51e-64,72;CL:0002194,1.38e-54,59;CL:0000576,1.38e-54,59;CL:0000040,1.38e-54,59;CL:0000559,1.38e-54,59;CL:0002009,2.08e-52,61;CL:0000738,3.93e-48,136;CL:0000839,1.55e-47,66;CL:0000557,1.20e-46,67;CL:0000763,5.74e-44,108;CL:0000049,5.74e-44,108;CL:0000037,1.01e-35,168;CL:0002087,1.71e-35,115;CL:0000988,2.12e-34,177;CL:0002032,3.64e-32,161;CL:0000837,3.64e-32,161;CL:0002031,1.10e-28,120;CL:0000094,4.01e-18,8;CL:0000081,8.44e-16,11;CL:0002393,1.36e-11,9;CL:0002397,1.36e-11,9;CL:0000134,5.06e-09,354;CL:0002320,1.47e-08,361;CL:0000775,1.69e-08,3;CL:0000226,3.60e-07,3;CL:0000842,3.60e-07,3;CL:0000219,5.93e-07,386;CL:0000767,8.74e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.13e-57;42!CL:0000049;4.77e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.16e-39!102;UBERON:0003061!4.16e-39!102;UBERON:0002193!2.01e-35!112;UBERON:0002371!1.59e-25!80;UBERON:0001474!2.20e-22!86;UBERON:0002405!5.03e-21!115;UBERON:0004765!2.71e-16!101;UBERON:0001434!2.71e-16!101;UBERON:0007023!3.07e-16!115;UBERON:0000178!3.06e-14!15;UBERON:0000179!3.06e-14!15;UBERON:0000463!3.06e-14!15;UBERON:0003081!3.08e-11!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.07e-21;15!UBERON:0000179;3.07e-21;15!UBERON:0000463;3.07e-21;15!UBERON:0002390;2.60e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.98e-55,98;UBERON:0003061,1.98e-55,98;UBERON:0002193,7.29e-49,108;UBERON:0002371,1.05e-39,76;UBERON:0001474,6.34e-36,82;UBERON:0002405,7.52e-32,93;UBERON:0004765,1.15e-31,90;UBERON:0001434,2.62e-27,100;UBERON:0000178,2.93e-21,15;UBERON:0000179,2.93e-21,15;UBERON:0000463,2.93e-21,15;UBERON:0003081,8.87e-21,203;UBERON:0002204,1.39e-12,167;UBERON:0000926,6.88e-10,315;UBERON:0004120,6.88e-10,315;UBERON:0006603,6.88e-10,315;UBERON:0002384,6.23e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52826811495903,1.31360943119913,1.57421562627358,3.14691421479123,1.15148819429164,2.78669021968937,0,0,0,0,0,0.293600439334847,3.87796785972314,11.4310335057981,13.0206522429511,0,0,0,4.07115068582781,4.1566353805769,5.33684934613196,6.50801303335917,4.11167888021826,3.09706370895104,16.3984663623626,10.7587496742222,9.69577142543199,3.44745680736619,3.87290810150296,2.70852973188684,3.76484679085209,3.82068610080984,2.47195832889593,8.57034898638527,4.8139354061414,3.19668562899521,14.5134572082155,17.5528018707036,21.7374622771674,8.9964863974861,4.53908179752912,7.4738669879469,9.79869794501299,10.429658368404,9.33912032232002,6.65939452896706,4.05105399586321,6.0127853613768,2.5350634357433,4.46469029926591,3.56419697364239,3.93150209012733,3.60424542819615,2.73233497385036,1.42506371870624,0.99458338599545,0.730656615058536,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0.132957960518865,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7670626154095,38.7780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0,0.445893486866185,0,0,0,0,0,0,0,0.088048434013226,0,0.288239906833923,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0,0.431255149719035,0.513372145118994,0,0,0,0,0,18.7251755986796,32.9077605124427,17.4054515643135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,4.74571241800957,3.41528184971022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.30347334256665,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46228093778771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,4.56702848308952,2.29391162142713,3.98753031021914,1.42939065274673,1.23408681925858,5.18778648954174,2.16012574895246,3.17250070517708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399121573143,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0.23874448473769,0,0,0.994147647766298,0.281338832821026,0.111308705022906,0.824019371133798,0.211125408127993,1.59398390600856,1.10513566212459,0,0,1.6001024709939,0,0,1.61119057208048,0.511572370226872,0,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,3.05163472634166,0,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0.651884231532048,0.638002319463839,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,1.77912677208373,0.370691816839509,0.208843899010911,0.269604531922708,0.802577647298789,0,0,0,0,0,0,0,2.0851571277401,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.698906672968121,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,0.391102765469606,0.64127056201227,0.426905989478705,0,0,0,0.171594997861965,0,0.372757606696298,0.235694034616795,0,0,0,0,1.20084057741958,0.410716136675979,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0.449947783103001,0.77380195455795,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0.146552233678082,1.32506888912221,0.775697738169303,0.13223260174269,0.171086837884329,0,1.9221734262185,1.57204305099666,2.89967338743037,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0.573409195690071,0.554645257684261,0.496771223531068,0,0,0,0,1.88212655758537,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,2.87093721161733,0,0,0.489473409012935,0,0,0,0,0,0.844712203265363,0,0,0,0,2.33832370607266,1.59437808376036,3.92556946214026,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0.300841313397029,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.255524855279191,0,0.336283722218824,0,0,0,0.345701962667338,0.171488009437418,0.135939465953663,0.0657727735628491,0.354581522651905,0,0.078493092850514,0.471346769748006,0,0,0,1.43325506366115,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0.559277158988962,0.098150233615243,0,0,0.205325613712494,0,0,0,0.397901550322736,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,1.57046773691956,0.297046400327086,0.4226557275834,0,0.187967835959707,0.386747327841463,1.09935271517422,1.78553938605658,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0.5290268405154,0,0,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| |||
|short_description=p8@ODF3B | |||
}} |
Revision as of 16:51, 21 January 2014
Short description: | p8@ODF3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ODF3B_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 90bp_to_ENST00000329363, NM_001014440, uc003bmh.2_5end |
EntrezGene: | ODF3B |
HGNC: | 34388 |
UniProt: | A8MYP8A1L1A8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.98e-55 | 98 |
blood island | 1.98e-55 | 98 |
hemolymphoid system | 7.29e-49 | 108 |
bone marrow | 1.05e-39 | 76 |
bone element | 6.34e-36 | 82 |
immune system | 7.52e-32 | 93 |
skeletal element | 1.15e-31 | 90 |
skeletal system | 2.62e-27 | 100 |
blood | 2.93e-21 | 15 |
haemolymphatic fluid | 2.93e-21 | 15 |
organism substance | 2.93e-21 | 15 |
lateral plate mesoderm | 8.87e-21 | 203 |
musculoskeletal system | 1.39e-12 | 167 |
mesoderm | 6.88e-10 | 315 |
mesoderm-derived structure | 6.88e-10 | 315 |
presumptive mesoderm | 6.88e-10 | 315 |
connective tissue | 6.23e-08 | 371 |