FFCP PHASE1:Hg19::chr22:46546494..46546525,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5465 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9232 | |||
|TSSclassifier=strong | |||
|UniProt=Q07869,B0QYX1,F1D8S4 | |||
|association_with_transcript=0bp_to_ENST00000262735,ENST00000396000,ENST00000420804,NM_001001928,NM_005036,uc003bgw.1,uc003bgx.1_5end | |||
|description=CAGE_peak_2_at_PPARA_5end | |||
|id=chr22:46546494..46546525,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.48e-29!115;UBERON:0001049!4.92e-08!57;UBERON:0005068!4.92e-08!57;UBERON:0006241!4.92e-08!57;UBERON:0007135!4.92e-08!57;UBERON:0000062!7.58e-08!511;UBERON:0002616!2.48e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;6.62e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.00e-31,114;UBERON:0001049,1.65e-07,56;UBERON:0005068,1.65e-07,56;UBERON:0006241,1.65e-07,56;UBERON:0007135,1.65e-07,56;UBERON:0000073,3.92e-07,53;UBERON:0002616,3.92e-07,53 | |||
|phase1_expression=1.2717486548939,2.35510576280081,1.26858963686374,4.00293193412522,0.446961094427288,1.74467704820074,0,0,2.61185628199839,0.245733936501509,0,0.436882744260345,1.31883489114227,0.990130823680373,1.65698687863958,0.672325146451775,0,1.46062018077475,0,0.492484232307152,1.02000345622126,0.313454721478088,0.286235987131057,0.821246550437305,0.627713197974014,0.840547463227464,0.738905305049512,0.629686250509434,3.14691421479123,1.53531759238885,0.309632246632152,0.919421224478927,0.90361775633475,1.10926203050036,0.154934401160603,0.284338464974843,0.587200878669695,2.21598163412751,1.40381113229099,2.38711957787437,1.11957737119962,1.29557466407592,1.54545340580512,1.30858414901608,2.26725566213286,2.18325655069035,1.85943229524548,2.05583944010913,2.78735733805593,1.7261543539329,0.768482119587302,2.12834006899727,0.344745680736619,2.5819387343353,1.35426486594342,2.63539275359647,1.09162460023138,1.79778787556068,0.612167784741805,1.60464513538047,3.19668562899521,0.329851300186716,1.19678194572979,0.852449501065388,0.870627715885752,1.13477044938228,1.86846674698672,1.25624332628372,1.5644487552606,2.82345498116652,2.42159801053347,1.10483290796269,1.26584954976354,1.05627643155971,1.70083439972035,1.67726916406701,1.01095768031846,1.80212271409808,1.12507910687956,0.570025487482497,1.59133341759272,1.27864907635244,3.51992488922645,0.546138611262131,1.77901850772711,0.426730222566507,0,0.574752439954483,0,0,1.1384259382189,1.17447437874188,1.52909291250092,2.64342657158052,2.24203425192614,1.05353633910031,0.393419540227666,0.786021525498329,0.616804496998528,1.00311897234407,0,0.473447805734733,0,0.557052284425868,0.589211814949674,0.221533894583621,0.270803863765016,0.640456598628376,0.520237390239513,0.493313713811028,1.10540007114339,0.579606171470105,0.889719378972363,1.33770414044857,2.09071047609954,0.906474741580529,0.766440987203842,1.37450978193052,0.759059076058509,0.95569624297229,0,0.950452044448374,0.301150238155546,1.15187950038977,2.49861453104692,0.947109008176067,0.821127996921047,0.80642697289893,2.40696176205157,0.868946423296794,9.75227465255847,0.670700859703636,0.511450247374121,1.80719576192283,0.50133791063589,2.02785126545153,3.1811437882044,3.89307896242109,0.283604451492204,0.886917589850256,0.527008714158756,2.48860243445654,1.82147644146271,0,2.92092654289215,2.96020553408754,2.39324328933957,1.90792499444274,2.85997455390064,2.60020250930695,0.79504962946682,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.835979866147242,1.03366703667732,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0.367663080345869,1.62028389576352,0.982297011124877,0.898117490504679,0.337834441449967,3.06633274931766,0,0.183201743930407,0,0,0.872188104285069,0.496971951695318,0.633152558322899,1.32409180813219,1.72101972449288,0.354668382198357,0.560677600142307,0,0.74000264525148,2.8008993185979,1.48181739276657,1.14423332179421,1.96764655938411,1.15235184896,0.468642863667593,0.936480230490962,0.570471821544449,0.448346041655403,0.587172493218824,1.29498355494505,1.26405726032024,1.63323337003915,0.859840221182376,1.75653827998801,0,2.71993622206413,1.82032272387605,2.15585442544872,0.168336113954066,0.875829639103749,0.277064115484183,2.19488810440419,1.5324389789951,2.25357088359895,0.453728732640084,2.15267562826634,1.70845911054854,1.69545520927649,1.80054657650641,2.47326070172253,3.60696756063881,2.23340227597908,1.0126579934476,0.974370051611986,2.77677151668526,1.93304787148829,2.58633690910099,3.19508633264953,1.10827308050404,0.847802961552438,0.57978255948989,0.545492241181669,0.286804595389004,0.121973706129595,0,0.813357600086629,0.725627385107593,0.756962552626885,0,0,1.28648187638577,1.38134921352481,0.464367928031979,1.44375896333917,0.236613600079688,1.18009283054671,0.723033089650446,0.661763836394364,0.653638332277218,0.474541238222193,0.539325232640658,0,1.15424147083917,0,0,1.6462960453256,1.47008711385542,29.1536580090211,20.6393715502301,19.4960669204863,0.882926198829301,1.22988438543114,0.343135620597051,1.20725313949488,0,0.502644862058154,0.370353780634118,0.977424915930974,0,1.44331342025273,0.231860809950154,0.117408694235822,0.433099343283221,0.925971025153221,0.570762456703795,0.790204397959275,0,1.96973604869918,1.63802985597466,1.18904929830983,0.93733833986777,0.671928512795438,1.13420077793909,0.626909658919938,1.16253575405585,0.383382679165211,3.4486426652716,2.28925928434388,1.24396869324463,2.01767934783746,2.5248486685276,0.380987365753014,2.29193055334967,0,0,0.925447434329912,1.20137223137567,0.857479297891735,0.336393253036082,0,0.36669142910475,1.16344544182,0,0.845302752556,0.531876233169741,2.08014873822732,0.771622122786426,0,0,1.85871391755592,2.17048642156577,0.823240336780769,0.65147236858747,1.42156779497018,0,0.602878754119172,2.61460037580088,0.499864955910285,1.2162378064119,1.50677127429638,0,0.479249710983165,1.14861935834114,0,0.723906533337896,2.4657158706046,0.716243852959582,0.448340575974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| |||
|short_description=p2@PPARA | |||
}} |
Revision as of 16:35, 21 January 2014
Short description: | p2@PPARA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPARA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000262735, ENST00000396000, ENST00000420804, NM_001001928, NM_005036, uc003bgw.1, uc003bgx.1_5end |
EntrezGene: | PPARA |
HGNC: | 9232 |
UniProt: | Q07869B0QYX1F1D8S4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.00e-31 | 114 |
neural tube | 1.65e-07 | 56 |
neural rod | 1.65e-07 | 56 |
future spinal cord | 1.65e-07 | 56 |
neural keel | 1.65e-07 | 56 |
regional part of nervous system | 3.92e-07 | 53 |
regional part of brain | 3.92e-07 | 53 |