FFCP PHASE1:Hg19::chr22:19868692..19868724,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18155 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_ENST00000485358_5end | |||
|description=CAGE_peak_2_at_TXNRD2_5end | |||
|id=chr22:19868692..19868724,- | |||
|ontology_enrichment_celltype=CL:0000213!5.30e-23!57;CL:0000215!5.30e-23!57;CL:0000066!1.12e-22!254;CL:0002078!1.16e-19!44;CL:0000222!5.09e-19!119;CL:0002139!1.01e-18!24;CL:0000115!9.93e-17!35;CL:0002321!1.77e-16!248;CL:0000220!2.79e-16!246;CL:0000076!1.87e-15!62;CL:0000071!2.63e-14!18;CL:0002546!2.63e-14!18;CL:0000548!4.58e-14!679;CL:0000004!4.58e-14!679;CL:0000255!4.58e-14!679;CL:0000012!1.49e-13!682;CL:0000057!1.01e-10!75;CL:0000055!2.07e-10!180;CL:0000063!3.13e-08!578;CL:0000144!3.14e-08!625;CL:0000003!1.08e-07!722;CL:0000077!1.49e-07!19;CL:1000413!1.60e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.94e-32;24!CL:0000115;2.70e-25;36!CL:0000071;6.04e-24;18!CL:0002078;2.61e-20;45!CL:0000213;1.04e-18;58!CL:0000215;1.04e-18;58!CL:1000413;5.26e-12;9!CL:0002543;1.63e-09;6!CL:0002138;2.57e-09;6!CL:0000076;2.90e-09;63!CL:0002544;9.51e-09;6!CL:0000349;1.14e-08;19!CL:0000077;5.85e-08;19!CL:1000746;8.99e-07;7!CL:1000612;8.99e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.31e-35,58;CL:0000215,1.31e-35,58;CL:0002139,1.16e-31,24;CL:0002078,2.32e-31,45;CL:0000115,2.38e-30,36;CL:0000071,6.73e-24,18;CL:0002546,6.73e-24,18;CL:0000066,1.41e-17,253;CL:0000076,1.02e-16,63;CL:0000222,1.84e-16,121;CL:1000413,5.23e-12,9;CL:0002543,1.85e-09,6;CL:0005020,2.68e-09,6;CL:0002138,2.68e-09,6;CL:0005022,2.68e-09,6;CL:0002321,7.73e-09,250;CL:0000349,8.43e-09,19;CL:0002544,1.28e-08,6;CL:0000077,3.96e-08,19;CL:1000746,6.22e-07,7;CL:1000612,6.22e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;6.04e-24;18!CL:0005022;2.57e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000487!1.28e-14!22;UBERON:0006914!2.48e-14!25;UBERON:0001986!2.63e-14!18;UBERON:0004638!2.63e-14!18;UBERON:0004852!2.63e-14!18;UBERON:0002049!5.08e-09!79;UBERON:0007798!5.08e-09!79;UBERON:0005631!3.07e-08!14;UBERON:0000158!3.07e-08!14;UBERON:0000055!7.48e-08!69;UBERON:0003915!1.60e-07!9;UBERON:0004700!1.60e-07!9;UBERON:0001917!1.60e-07!9;UBERON:0000468!7.00e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.04e-24;18!UBERON:0001986;6.04e-24;18!UBERON:0004852;6.04e-24;18!UBERON:0000487;2.90e-23;22!UBERON:0006914;1.00e-21;25!UBERON:0000490;1.53e-13;33!UBERON:0003915;5.26e-12;9!UBERON:0004700;5.26e-12;9!UBERON:0001917;5.26e-12;9!UBERON:0001473;8.44e-09;8!UBERON:0004536;8.44e-09;8!UBERON:0006558;8.44e-09;8!UBERON:0001851;2.75e-07;15!UBERON:0000074;8.99e-07;7!UBERON:0001229;8.99e-07;7!UBERON:0000055;9.10e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.73e-24,18;UBERON:0001986,6.73e-24,18;UBERON:0004852,6.73e-24,18;UBERON:0000487,3.17e-23,22;UBERON:0006914,9.54e-22,25;UBERON:0003915,5.23e-12,9;UBERON:0004700,5.23e-12,9;UBERON:0001917,5.23e-12,9;UBERON:0000055,2.09e-10,68;UBERON:0002049,1.57e-09,78;UBERON:0007798,1.57e-09,78;UBERON:0005631,2.98e-09,14;UBERON:0000158,2.98e-09,14;UBERON:0001473,9.12e-09,8;UBERON:0004536,9.12e-09,8;UBERON:0006558,9.12e-09,8;UBERON:0003124,4.93e-08,7;UBERON:0001851,1.93e-07,15;UBERON:0010532,6.22e-07,7;UBERON:0000074,6.22e-07,7;UBERON:0001229,6.22e-07,7;UBERON:0001230,6.22e-07,7;UBERON:0003220,6.22e-07,7;UBERON:0005749,6.22e-07,7;UBERON:0004199,6.22e-07,7;UBERON:0004209,6.22e-07,7;UBERON:0004198,6.22e-07,7 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0,2.00146596706261,0,0.872338524100369,0,0,0,0.737201809504527,0,1.52908960491121,2.37390280405608,0,0.331397375727916,0,1.80808358407193,0,0.487932798790507,0,0.612002073732759,0,0.286235987131057,0.136874425072884,2.00868223351684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0.434539556882471,0,0,0.661743720148475,0.443458794925128,0.614843499851882,0,0,0,0,0,0,0,0,0,13.1183188862025,8.60234595106124,10.7613555498354,1.13061588384802,1.67799774483962,5.50236083880135,10.4497483268405,4.39308490587859,5.33649394030065,4.68608857870538,16.1131726843659,6.84244895146661,17.5724681434682,5.51494620518803,4.0507097394088,11.16246603551,5.16417557040191,4.0540132973996,36.795992991812,6.6448596169769,19.0529813687624,0,0,1.3082821564276,0.496971951695318,1.01304409331664,0.264818361626438,0,0,0.560677600142307,0,3.20667812942308,0.311211035399766,0.269421344139376,0.163461903113459,0.302714855289863,0,1.17160715916898,0.312160076830321,1.1409436430889,1.04614076386261,0.23486899728753,0.161872944368132,0.842704840213491,2.04154171254893,1.35117749042945,1.75653827998801,1.18800285728205,2.22540236350701,0,2.15585442544872,2.02003336744879,1.12606667884768,3.60183350129438,2.19488810440419,3.37136575378922,0.901428353439581,1.13432183160021,3.04962380671065,0.640672166455702,0.423863802319124,1.50045548042201,0.515262646192195,1.54584324027377,1.30281799432113,1.18143432568886,0.194874010322397,1.51460264546469,1.10459878370759,0,0.710019185033229,0.503760491138201,0.847802961552438,0.193260853163297,0.818238361772504,0,0.243947412259191,0.132529768321485,0.69716365721711,0.725627385107593,1.7662459561294,0,0,1.28648187638577,0,0,0,1.30137480043828,0.842923450390509,0,2.09558548191549,1.08939722046203,0.71181185733329,0.539325232640658,0.392442930250692,0.769494313892781,0.738155454624648,0,0,0,0,0,0,0,0.368965315629341,0,0.219500570817251,3.37205259772859,0.502644862058154,0.370353780634118,0.977424915930974,0,0,0.463721619900307,0.117408694235822,16.6021414925235,11.5746378144153,12.5567740474835,0,0,0,0,0,1.87467667973554,0.503946384596579,0.283550194484773,0.0895585227028483,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.560655421726804,0.43596006883328,0.5867062865676,0.517086863031111,0,0,0.531876233169741,0,0.771622122786426,0,0.532844358032199,0.142977993658148,0,3.29296134712308,0.977208552881205,0,1.58390374586686,0.301439377059586,0.871533458600294,0.499864955910285,0,0,0,0,0,0,0.868687840005475,0.61642896765115,1.61154866915906,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0.542530047399471,1.03985430765404,2.3195768543631,0.630809660135739,0.585707074963566,0.300946099727719,0,0,0,1.10621501125022,0.173767228936166,0.195801157462741,0,0,0,0,12.4282304292966,11.6504807657348,8.16453791990137,0,0.767309866440312,1.96462066103151,0.256278298511402,0.511707249066704,0.160853921143607,0,0.771048469013278,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.241718899183244,0.40101294060657,0.0920809889358963,0.229628896329213,0.364182336013434,0.131124414959424,1.35359883872224,0.308061348417659,2.35304930753057,0,0,3.4120015221269,5.95327968467805,2.59099099322567,32.3877230649608,2.70946437543853,1.50506932156456,0.764628819135115,0.831076008928724,2.46262230194396,0,0,1.02580050046556,0.328014645699706,0.650756789328606,0.309123034943167,2.1060976908219,1.15513299888823,0,1.30012049207304,3.21367859688319,0.096670718292122,0.154048617114644,0.460511024178389,0.551346289938122,0,0.145016693914229,0.0852266274161009,0.267096106940212,0.330569830721956,0,0.510450849978337,0,0,0.31481234683064,0,0,0.532306030317022,0,0.55597265731176,0.572499546967965,0.744316738719335,0,0.190630193923825,0.255897791311334,0,0,0,1.07923474549989,0.54907405947211,0.706874414074119,0.202182481573316,0,0.421258456238981,1.46290121726877,0.487426979262569,0,0.545999645631943,0.141405431953713,0,0,1.32687795048244,0,0,0,0.811641507850816,1.54911749049875,0,0.143411352204052,0.687743287091848,0,0,0,0.658589785919804,1.89736586882858,3.49934720244983,0.192444225451024,0,1.08890984861323,0.188287601553558,1.29151611801369,0,2.21715076768338,0.229723400206959,0,0,0,0,0,0,0,0,0.854592569019785,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.81926752335391,20.770770172179,0.890894042497916,10.7506245734731,0,0,1.44701316529778,0,1.05562704063997,0.398495976502139,0,0,3.06806047506464,0,0.933118762985422,0.629078458031288,0.179021174675609,0,0,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.31843088410143,2.09135616417905,0,0.341826167541004,0,0.0897576444097721,0.108647371922008,36.0471310497069,2.38153742844842,33.581190889174,0,0,0,0,0,0,0,0,0.210998064528027,0,1.27217764290547,0,0,0.0884575645033392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| |||
|short_description=p2@TXNRD2 | |||
}} |
Revision as of 14:37, 21 January 2014
Short description: | p2@TXNRD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TXNRD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000485358_5end |
EntrezGene: | NA |
HGNC: | 18155 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.31e-35 | 58 |
barrier cell | 1.31e-35 | 58 |
endothelial cell of vascular tree | 1.16e-31 | 24 |
meso-epithelial cell | 2.32e-31 | 45 |
endothelial cell | 2.38e-30 | 36 |
blood vessel endothelial cell | 6.73e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.73e-24 | 18 |
epithelial cell | 1.41e-17 | 253 |
squamous epithelial cell | 1.02e-16 | 63 |
mesodermal cell | 1.84e-16 | 121 |
endothelial cell of artery | 5.23e-12 | 9 |
vein endothelial cell | 1.85e-09 | 6 |
lymphangioblast | 2.68e-09 | 6 |
endothelial cell of lymphatic vessel | 2.68e-09 | 6 |
vascular lymphangioblast | 2.68e-09 | 6 |
embryonic cell | 7.73e-09 | 250 |
extraembryonic cell | 8.43e-09 | 19 |
aortic endothelial cell | 1.28e-08 | 6 |
mesothelial cell | 3.96e-08 | 19 |
glomerular cell | 6.22e-07 | 7 |
kidney corpuscule cell | 6.22e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.73e-24 | 18 |
endothelium | 6.73e-24 | 18 |
cardiovascular system endothelium | 6.73e-24 | 18 |
simple squamous epithelium | 3.17e-23 | 22 |
squamous epithelium | 9.54e-22 | 25 |
endothelial tube | 5.23e-12 | 9 |
arterial system endothelium | 5.23e-12 | 9 |
endothelium of artery | 5.23e-12 | 9 |
vessel | 2.09e-10 | 68 |
vasculature | 1.57e-09 | 78 |
vascular system | 1.57e-09 | 78 |
extraembryonic membrane | 2.98e-09 | 14 |
membranous layer | 2.98e-09 | 14 |
lymphatic vessel | 9.12e-09 | 8 |
lymph vasculature | 9.12e-09 | 8 |
lymphatic part of lymphoid system | 9.12e-09 | 8 |
chorion | 4.93e-08 | 7 |
cortex | 1.93e-07 | 15 |
primitive nephron | 6.22e-07 | 7 |
renal glomerulus | 6.22e-07 | 7 |
renal corpuscle | 6.22e-07 | 7 |
glomerular capsule | 6.22e-07 | 7 |
metanephric mesenchyme | 6.22e-07 | 7 |
glomerular tuft | 6.22e-07 | 7 |
S-shaped body | 6.22e-07 | 7 |
renal vesicle | 6.22e-07 | 7 |
comma-shaped body | 6.22e-07 | 7 |