FFCP PHASE1:Hg19::chr21:35831852..35831861,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3753 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6240 | |||
|TSSclassifier=strong | |||
|UniProt=P15382,C7S316,Q6FHJ6 | |||
|association_with_transcript=40bp_to_ENST00000399289,ENST00000432085,NM_001127668,NM_001127669,uc002ytz.2,uc010gmq.2_5end | |||
|description=CAGE_peak_6_at_KCNE1_5end | |||
|id=chr21:35831852..35831861,- | |||
|ontology_enrichment_celltype=CL:0000128!8.33e-14!7;CL:0000126!8.33e-14!7;CL:0000127!8.33e-14!7;CL:0002453!8.33e-14!7;CL:0002319!2.58e-11!25;CL:0002605!2.48e-09!3;CL:0000243!1.03e-08!15;CL:0000125!1.03e-08!15;CL:0000030!1.03e-08!15;CL:0000339!1.03e-08!15;CL:0000064!1.09e-08!3;CL:0005012!1.09e-08!3;CL:0000067!1.09e-08!3;CL:0002304!1.09e-08!3;CL:0002603!1.27e-08!3;CL:0002586!1.82e-08!3;CL:0000095!1.22e-07!17;CL:0000123!1.22e-07!17;CL:0000133!5.38e-07!59;CL:0000221!6.40e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002605;7.92e-25;3!CL:0000128;1.19e-23;7!CL:0000126;1.19e-23;7!CL:0000127;1.19e-23;7!CL:0000243;3.84e-10;15!CL:0000125;3.84e-10;15!CL:0000095;3.88e-09;17!CL:0002615;2.71e-07;3!CL:0002603;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,7.02e-25,3;CL:0000128,1.33e-23,7;CL:0000126,1.33e-23,7;CL:0000127,1.33e-23,7;CL:0002453,1.33e-23,7;CL:0000243,4.03e-10,15;CL:0000125,4.03e-10,15;CL:0000030,4.03e-10,15;CL:0000339,4.03e-10,15;CL:0000095,4.05e-09,17;CL:0000123,4.05e-09,17;CL:0002603,3.16e-07,3;CL:0002615,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.08e-19;1!CL:0000339;3.84e-10;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:178;2.97e-19;1!DOID:326;2.97e-19;1!DOID:3978;2.97e-19;1!DOID:3394;2.97e-19;1!DOID:5844;2.97e-19;1!DOID:114;2.60e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.71e-19,1;DOID:326,2.71e-19,1;DOID:3978,2.71e-19,1;DOID:3394,2.71e-19,1;DOID:5844,2.71e-19,1;DOID:114,2.49e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007625!7.48e-14!11;UBERON:0002346!4.73e-12!90;UBERON:0003075!8.21e-12!86;UBERON:0007284!8.21e-12!86;UBERON:0000020!2.13e-11!23;UBERON:0003056!2.35e-11!61;UBERON:0000970!4.20e-11!20;UBERON:0000488!4.49e-11!4;UBERON:0001032!8.09e-11!24;UBERON:0004456!8.09e-11!24;UBERON:0002104!1.81e-10!21;UBERON:0000019!1.85e-09!19;UBERON:0000047!1.85e-09!19;UBERON:0004088!1.85e-09!19;UBERON:0003072!1.85e-09!19;UBERON:0003071!1.85e-09!19;UBERON:0004128!1.85e-09!19;UBERON:0005743!2.56e-09!86;UBERON:0000073!7.69e-09!94;UBERON:0001016!7.69e-09!94;UBERON:0000966!1.01e-08!5;UBERON:0005388!1.01e-08!5;UBERON:0001802!1.01e-08!5;UBERON:0001778!1.09e-08!3;UBERON:0001775!1.09e-08!3;UBERON:0000033!1.81e-08!123;UBERON:0001781!1.82e-08!3;UBERON:0001782!1.82e-08!3;UBERON:0005424!1.82e-08!3;UBERON:0001456!2.19e-08!21;UBERON:0000153!8.89e-08!129;UBERON:0007811!8.89e-08!129;UBERON:0000924!1.02e-07!173;UBERON:0006601!1.02e-07!173;UBERON:0004121!1.92e-07!169;UBERON:0002203!2.34e-07!6;UBERON:0001768!2.34e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;2.60e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.99e-10,2 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,1.02000345622126,0.313454721478088,1.43117993565528,1.36874425072884,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.756278537312543,0.886917589850256,0.263504357079378,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0.252433774244115,0,0.323292113637624,0.355009592516614,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0.256450125116389,0.984043937099117,0.325378394664303,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0.916641696046735,0,1.39775300349294,0.858452096273142,0.223171457441873,2.08268764708851,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,1.57611414598396,0.472091293214983,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.453411851024545,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,1.8374728641192,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,1.21393120847326,0.91064876540519,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985123076837112,2.14371304124943,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@KCNE1 | |||
}} |
Revision as of 13:32, 21 January 2014
Short description: | p6@KCNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KCNE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_ENST00000399289, ENST00000432085, NM_001127668, NM_001127669, uc002ytz.2, uc010gmq.2_5end |
EntrezGene: | KCNE1 |
HGNC: | 6240 |
UniProt: | P15382C7S316Q6FHJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 7.02e-25 | 3 |
oligodendrocyte | 1.33e-23 | 7 |
macroglial cell | 1.33e-23 | 7 |
astrocyte | 1.33e-23 | 7 |
oligodendrocyte precursor cell | 1.33e-23 | 7 |
glial cell (sensu Vertebrata) | 4.03e-10 | 15 |
glial cell | 4.03e-10 | 15 |
glioblast | 4.03e-10 | 15 |
glioblast (sensu Vertebrata) | 4.03e-10 | 15 |
neuron associated cell | 4.05e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 4.05e-09 | 17 |
astrocyte of the cerebellum | 3.16e-07 | 3 |
adipocyte of omentum tissue | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.99e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.71e-19 | 1 |
ischemia | 2.71e-19 | 1 |
extrinsic cardiomyopathy | 2.71e-19 | 1 |
myocardial ischemia | 2.71e-19 | 1 |
myocardial infarction | 2.71e-19 | 1 |
heart disease | 2.49e-10 | 2 |