FFCP PHASE1:Hg19::chr20:60813535..60813592,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9885 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15761 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H1P3,E7ET92 | |||
|association_with_transcript=0bp_to_ENST00000313733,ENST00000358053,ENST00000439951,NM_014835,NM_144498,uc002yck.1,uc002ycl.1,uc011aah.1_5end | |||
|coexpression_cluster_id=C468 | |||
|description=CAGE_peak_2_at_OSBPL2_5end | |||
|id=chr20:60813535..60813592,+ | |||
|ontology_enrichment_celltype=CL:0000766!7.36e-19!76;CL:0000738!2.12e-17!140;CL:0000839!9.08e-16!70;CL:0000557!2.22e-15!71;CL:0002057!4.44e-15!42;CL:0002009!1.23e-13!65;CL:0002031!2.20e-13!124;CL:0000763!6.85e-13!112;CL:0000049!6.85e-13!112;CL:0002194!8.93e-13!63;CL:0000576!8.93e-13!63;CL:0000040!8.93e-13!63;CL:0000559!8.93e-13!63;CL:0000037!2.28e-12!172;CL:0000566!2.28e-12!172;CL:0000860!4.46e-12!45;CL:0002032!2.10e-11!165;CL:0000837!2.10e-11!165;CL:0002087!1.40e-10!119;CL:0000988!3.04e-10!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.71e-10;33!CL:0002057;1.71e-10;33!CL:0000766;1.92e-09;69!CL:0000576;1.96e-09;48!CL:0000473;6.47e-09;39!CL:0000234;6.47e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.60e-21,72;CL:0000738,6.39e-19,136;CL:0000839,4.71e-18,66;CL:0000557,1.33e-17,67;CL:0002009,8.33e-16,61;CL:0000860,4.44e-15,42;CL:0002057,4.44e-15,42;CL:0002194,6.85e-15,59;CL:0000576,6.85e-15,59;CL:0000040,6.85e-15,59;CL:0000559,6.85e-15,59;CL:0002031,9.25e-15,120;CL:0000473,1.32e-14,48;CL:0000234,1.32e-14,48;CL:0000763,2.53e-14,108;CL:0000049,2.53e-14,108;CL:0000037,1.95e-13,168;CL:0002032,1.93e-12,161;CL:0000837,1.93e-12,161;CL:0002087,8.78e-12,115;CL:0000988,1.86e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.94e-11;42!UBERON:0006601;9.56e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.95e-34!115;UBERON:0001049!7.71e-23!57;UBERON:0005068!7.71e-23!57;UBERON:0006241!7.71e-23!57;UBERON:0007135!7.71e-23!57;UBERON:0003080!1.48e-18!42;UBERON:0002780!1.98e-18!41;UBERON:0001890!1.98e-18!41;UBERON:0006240!1.98e-18!41;UBERON:0002616!4.45e-18!59;UBERON:0002390!7.17e-18!102;UBERON:0003061!7.17e-18!102;UBERON:0000955!1.01e-15!69;UBERON:0006238!1.01e-15!69;UBERON:0001893!2.19e-15!34;UBERON:0002020!3.39e-15!34;UBERON:0003528!3.39e-15!34;UBERON:0001017!4.12e-15!82;UBERON:0002791!7.28e-15!33;UBERON:0002193!1.39e-14!112;UBERON:0001869!2.61e-14!32;UBERON:0005743!7.70e-14!86;UBERON:0000073!1.87e-13!94;UBERON:0001016!1.87e-13!94;UBERON:0002371!2.36e-13!80;UBERON:0002619!2.88e-13!22;UBERON:0001950!2.08e-12!20;UBERON:0001474!4.81e-12!86;UBERON:0003075!2.87e-11!86;UBERON:0007284!2.87e-11!86;UBERON:0002346!4.47e-11!90;UBERON:0000956!1.49e-10!25;UBERON:0000203!1.49e-10!25;UBERON:0004765!1.51e-10!101;UBERON:0001434!1.51e-10!101;UBERON:0002405!2.05e-08!115;UBERON:0003056!9.32e-08!61;UBERON:0000153!5.53e-07!129;UBERON:0007811!5.53e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.69e-13;41!UBERON:0001890;1.69e-13;41!UBERON:0002619;2.65e-13;22!UBERON:0001893;4.28e-13;34!UBERON:0003528;6.77e-13;34!UBERON:0002020;6.77e-13;34!UBERON:0001869;7.62e-13;32!UBERON:0002791;8.55e-13;32!UBERON:0001950;1.92e-12;20!UBERON:0000073;2.18e-12;53!UBERON:0002616;2.18e-12;53!UBERON:0000956;1.59e-10;25!UBERON:0000203;1.59e-10;25!UBERON:0007023;1.45e-09;114!UBERON:0000955;6.87e-08;68!UBERON:0001017;1.07e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.52e-34,114;UBERON:0001049,1.08e-22,56;UBERON:0005068,1.08e-22,56;UBERON:0006241,1.08e-22,56;UBERON:0007135,1.08e-22,56;UBERON:0000073,3.40e-21,53;UBERON:0002616,3.40e-21,53;UBERON:0002390,8.74e-20,98;UBERON:0003061,8.74e-20,98;UBERON:0002780,1.98e-18,41;UBERON:0001890,1.98e-18,41;UBERON:0003080,1.98e-18,41;UBERON:0006240,1.98e-18,41;UBERON:0002193,3.81e-16,108;UBERON:0000955,1.53e-15,68;UBERON:0006238,1.53e-15,68;UBERON:0001893,2.19e-15,34;UBERON:0003528,3.39e-15,34;UBERON:0002020,3.39e-15,34;UBERON:0002371,3.40e-15,76;UBERON:0001017,6.30e-15,81;UBERON:0001016,2.00e-14,89;UBERON:0001869,2.61e-14,32;UBERON:0002791,3.05e-14,32;UBERON:0001474,1.13e-13,82;UBERON:0002619,2.88e-13,22;UBERON:0001950,2.08e-12,20;UBERON:0002405,3.98e-12,93;UBERON:0004765,6.23e-11,90;UBERON:0001434,6.58e-11,100;UBERON:0000956,1.49e-10,25;UBERON:0000203,1.49e-10,25;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,3.30e-10,86;UBERON:0003056,5.79e-08,61 | |||
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| |||
|short_description=p2@OSBPL2 | |||
}} |
Revision as of 12:37, 21 January 2014
Short description: | p2@OSBPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OSBPL2_5end |
Coexpression cluster: | C468_Neutrophils_Eosinophils_cerebellum_occipital_Whole_temporal_parietal |
Association with transcript: | 0bp_to_ENST00000313733, ENST00000358053, ENST00000439951, NM_014835, NM_144498, uc002yck.1, uc002ycl.1, uc011aah.1_5end |
EntrezGene: | OSBPL2 |
HGNC: | 15761 |
UniProt: | Q9H1P3E7ET92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.60e-21 | 72 |
leukocyte | 6.39e-19 | 136 |
myeloid lineage restricted progenitor cell | 4.71e-18 | 66 |
granulocyte monocyte progenitor cell | 1.33e-17 | 67 |
macrophage dendritic cell progenitor | 8.33e-16 | 61 |
classical monocyte | 4.44e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.44e-15 | 42 |
monopoietic cell | 6.85e-15 | 59 |
monocyte | 6.85e-15 | 59 |
monoblast | 6.85e-15 | 59 |
promonocyte | 6.85e-15 | 59 |
hematopoietic lineage restricted progenitor cell | 9.25e-15 | 120 |
defensive cell | 1.32e-14 | 48 |
phagocyte | 1.32e-14 | 48 |
myeloid cell | 2.53e-14 | 108 |
common myeloid progenitor | 2.53e-14 | 108 |
hematopoietic stem cell | 1.95e-13 | 168 |
hematopoietic oligopotent progenitor cell | 1.93e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.93e-12 | 161 |
nongranular leukocyte | 8.78e-12 | 115 |
hematopoietic cell | 1.86e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.52e-34 | 114 |
neural tube | 1.08e-22 | 56 |
neural rod | 1.08e-22 | 56 |
future spinal cord | 1.08e-22 | 56 |
neural keel | 1.08e-22 | 56 |
regional part of nervous system | 3.40e-21 | 53 |
regional part of brain | 3.40e-21 | 53 |
hematopoietic system | 8.74e-20 | 98 |
blood island | 8.74e-20 | 98 |
regional part of forebrain | 1.98e-18 | 41 |
forebrain | 1.98e-18 | 41 |
anterior neural tube | 1.98e-18 | 41 |
future forebrain | 1.98e-18 | 41 |
hemolymphoid system | 3.81e-16 | 108 |
brain | 1.53e-15 | 68 |
future brain | 1.53e-15 | 68 |
telencephalon | 2.19e-15 | 34 |
brain grey matter | 3.39e-15 | 34 |
gray matter | 3.39e-15 | 34 |
bone marrow | 3.40e-15 | 76 |
central nervous system | 6.30e-15 | 81 |
nervous system | 2.00e-14 | 89 |
cerebral hemisphere | 2.61e-14 | 32 |
regional part of telencephalon | 3.05e-14 | 32 |
bone element | 1.13e-13 | 82 |
regional part of cerebral cortex | 2.88e-13 | 22 |
neocortex | 2.08e-12 | 20 |
immune system | 3.98e-12 | 93 |
skeletal element | 6.23e-11 | 90 |
skeletal system | 6.58e-11 | 100 |
cerebral cortex | 1.49e-10 | 25 |
pallium | 1.49e-10 | 25 |
neural plate | 2.17e-10 | 82 |
presumptive neural plate | 2.17e-10 | 82 |
neurectoderm | 3.30e-10 | 86 |
pre-chordal neural plate | 5.79e-08 | 61 |