FFCP PHASE1:Hg19::chr20:58533868..58533877,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1195 | |||
|description=CAGE_peak_at_chr20:58533868..58533877,- | |||
|id=chr20:58533868..58533877,- | |||
|ontology_enrichment_celltype=CL:0000068!2.40e-12!3;CL:0000069!2.40e-12!3;CL:0000307!2.40e-12!3;CL:0000377!2.40e-12!3;CL:0000167!1.48e-09!1;CL:0000164!1.48e-09!1;CL:0000502!1.48e-09!1;CL:0000172!1.48e-09!1;CL:0000173!1.48e-09!1;CL:0002351!1.48e-09!1;CL:0002563!2.46e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0000083;5.56e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,5.56e-26,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!5.31e-10!1;DOID:1357!5.31e-10!1;DOID:4430!1.48e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:4074;2.74e-50;2!DOID:4905;2.74e-50;2!DOID:3498;2.74e-50;2!DOID:1793;5.56e-26;4!DOID:170;7.67e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,2.74e-50,2;DOID:4905,2.74e-50,2;DOID:3498,2.74e-50,2;DOID:1793,5.56e-26,4;DOID:170,7.67e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0003126!8.60e-20!7;UBERON:0001005!8.60e-20!7;UBERON:0003127!3.45e-18!2;UBERON:0000341!2.22e-17!2;UBERON:0004921!1.51e-15!129;UBERON:0004185!1.51e-15!129;UBERON:0000065!3.68e-14!53;UBERON:0000974!2.22e-13!10;UBERON:0001007!1.86e-12!155;UBERON:0001555!1.86e-12!155;UBERON:0007026!1.86e-12!155;UBERON:0001004!3.10e-12!72;UBERON:0006562!3.40e-12!11;UBERON:0000077!1.02e-11!130;UBERON:0005178!2.07e-11!34;UBERON:0002224!2.07e-11!34;UBERON:0004119!3.49e-11!169;UBERON:0000925!3.49e-11!169;UBERON:0006595!3.49e-11!169;UBERON:0005181!4.60e-11!35;UBERON:0000072!1.34e-10!46;UBERON:0008947!3.96e-10!38;UBERON:0003258!3.96e-10!38;UBERON:0001764!5.31e-10!1;UBERON:0001825!5.31e-10!1;UBERON:0007196!5.42e-10!14;UBERON:0001558!5.42e-10!14;UBERON:0002171!6.31e-10!1;UBERON:0006518!6.31e-10!1;UBERON:0008949!6.31e-10!1;UBERON:0000101!6.31e-10!1;UBERON:0002167!6.31e-10!1;UBERON:0001242!2.46e-09!4;UBERON:0001262!2.46e-09!4;UBERON:0004786!2.46e-09!4;UBERON:0004808!2.46e-09!4;UBERON:0001277!2.46e-09!4;UBERON:0000915!2.56e-09!52;UBERON:0002372!2.67e-09!1;UBERON:0001961!2.67e-09!1;UBERON:0001744!2.67e-09!1;UBERON:0001735!2.67e-09!1;UBERON:0002370!3.44e-09!4;UBERON:0005058!3.44e-09!4;UBERON:0009113!3.44e-09!4;UBERON:0003295!3.44e-09!4;UBERON:0005562!3.44e-09!4;UBERON:0001041!1.59e-08!98;UBERON:0005911!1.72e-08!82;UBERON:0001042!6.84e-08!10;UBERON:0009145!6.84e-08!10;UBERON:0003350!1.23e-07!5;UBERON:0005153!1.50e-07!37;UBERON:0002367!3.24e-07!11;UBERON:0010147!3.24e-07!11;UBERON:0009846!3.24e-07!11;UBERON:0003353!3.24e-07!11;UBERON:0004902!3.24e-07!11;UBERON:0003820!3.24e-07!11;UBERON:0009847!3.24e-07!11;UBERON:0001046!4.77e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;4.52e-50;2!UBERON:0003126;1.91e-15;7!UBERON:0001005;1.91e-15;7!UBERON:0001264;2.73e-11;10!UBERON:0007196;5.93e-08;15!UBERON:0001558;5.93e-08;15!UBERON:0002075;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,4.52e-50,2;UBERON:0003126,1.91e-15,7;UBERON:0001005,1.91e-15,7;UBERON:0001264,2.73e-11,10;UBERON:0007196,5.93e-08,15;UBERON:0001558,5.93e-08,15;UBERON:0002075,7.18e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,5.08728009223433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0.129177819672012,0.31037357147929,0,0,0,0,0,0.0673520530145875,1.29099969706817,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr20:58533868..58533877,- | |||
}} |
Revision as of 12:34, 21 January 2014
Short description: | p@chr20:58533868..58533877, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:58533868..58533877, - |
Coexpression cluster: | C1195_ductal_oral_gastric_Eosinophils_hepatoblastoma_CD14_epitheloid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 5.56e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 4.52e-50 | 2 |
trachea | 1.91e-15 | 7 |
respiratory airway | 1.91e-15 | 7 |
pancreas | 2.73e-11 | 10 |
tracheobronchial tree | 5.93e-08 | 15 |
lower respiratory tract | 5.93e-08 | 15 |
viscus | 7.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 2.74e-50 | 2 |
pancreatic carcinoma | 2.74e-50 | 2 |
pancreatic ductal adenocarcinoma | 2.74e-50 | 2 |
pancreatic cancer | 5.56e-26 | 4 |
endocrine gland cancer | 7.67e-18 | 6 |