FFCP PHASE1:Hg19::chr20:35177642..35177704,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C384 | |||
|description=CAGE_peak_at_chr20:35177642..35177704,+ | |||
|id=chr20:35177642..35177704,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.13e-22!180;CL:0000192!6.36e-13!42;CL:0000514!6.36e-13!42;CL:0000057!9.58e-13!75;CL:0000183!1.56e-12!59;CL:0000680!3.94e-12!57;CL:0000056!3.94e-12!57;CL:0000355!3.94e-12!57;CL:0000187!1.28e-11!54;CL:0000359!1.43e-10!32;CL:0000393!1.51e-10!60;CL:0000211!1.51e-10!60;CL:0000136!4.08e-09!15;CL:0000222!3.55e-08!119;CL:0002334!9.17e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.13e-10;32!CL:0000192;5.30e-10;43!CL:0000136;4.59e-09;13!CL:0002334;2.42e-07;12!CL:0000134;2.47e-07;55!CL:0000187;9.96e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,8.65e-14,43;CL:0000514,8.65e-14,43;CL:0000680,6.95e-13,58;CL:0000056,6.95e-13,58;CL:0000355,6.95e-13,58;CL:0000187,2.59e-12,55;CL:0000057,8.08e-12,76;CL:0000393,3.78e-11,61;CL:0000211,3.78e-11,61;CL:0000359,3.97e-11,32;CL:0000136,5.31e-10,15;CL:0002334,2.24e-07,12;CL:0000222,2.27e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;5.30e-10;43!CL:0000355;9.58e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.79e-16!143;UBERON:0000914!5.37e-15!83;UBERON:0002329!5.37e-15!83;UBERON:0003077!5.37e-15!83;UBERON:0003059!5.37e-15!83;UBERON:0007282!5.37e-15!83;UBERON:0009618!5.37e-15!83;UBERON:0007285!5.37e-15!83;UBERON:0002385!9.68e-14!63;UBERON:0001015!9.68e-14!63;UBERON:0000383!9.68e-14!63;UBERON:0004290!1.10e-13!70;UBERON:0000486!6.43e-13!82;UBERON:0001134!1.12e-12!61;UBERON:0002036!1.12e-12!61;UBERON:0003082!1.12e-12!61;UBERON:0002100!1.20e-11!216;UBERON:0000481!1.65e-11!347;UBERON:0004872!7.31e-11!84;UBERON:0003104!7.42e-11!238;UBERON:0009142!7.42e-11!238;UBERON:0000468!2.19e-10!659;UBERON:0001009!3.03e-10!113;UBERON:0004535!1.96e-09!110;UBERON:0002049!3.77e-09!79;UBERON:0007798!3.77e-09!79;UBERON:0000475!9.52e-09!365;UBERON:0003914!1.08e-08!118;UBERON:0000490!3.54e-08!138;UBERON:0001981!3.65e-08!60;UBERON:0007500!3.65e-08!60;UBERON:0004537!3.65e-08!60;UBERON:0006965!3.65e-08!60;UBERON:0001637!4.53e-08!42;UBERON:0003509!4.53e-08!42;UBERON:0004572!4.53e-08!42;UBERON:0000926!8.22e-08!448;UBERON:0004120!8.22e-08!448;UBERON:0006603!8.22e-08!448;UBERON:0000055!1.78e-07!69;UBERON:0007100!3.82e-07!27;UBERON:0000467!4.78e-07!625;UBERON:0001013!4.87e-07!14;UBERON:0000480!7.09e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.33e-07;14!UBERON:0007100;1.57e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,5.94e-17,160;UBERON:0009142,5.94e-17,160;UBERON:0005256,3.82e-16,122;UBERON:0002385,1.14e-14,64;UBERON:0001015,1.14e-14,64;UBERON:0000383,1.14e-14,64;UBERON:0007503,1.08e-13,78;UBERON:0007524,1.14e-13,73;UBERON:0001134,1.68e-13,62;UBERON:0002036,1.68e-13,62;UBERON:0003082,1.68e-13,62;UBERON:0002329,2.87e-13,71;UBERON:0003059,2.87e-13,71;UBERON:0007282,2.87e-13,71;UBERON:0004290,2.87e-13,71;UBERON:0009618,2.87e-13,71;UBERON:0003077,3.25e-13,72;UBERON:0007285,3.25e-13,72;UBERON:0000486,3.84e-11,83;UBERON:0000926,1.27e-10,315;UBERON:0004120,1.27e-10,315;UBERON:0006603,1.27e-10,315;UBERON:0002100,1.66e-10,199;UBERON:0004872,1.77e-10,83;UBERON:0001009,9.60e-10,112;UBERON:0004535,6.77e-09,109;UBERON:0002049,2.58e-08,78;UBERON:0007798,2.58e-08,78;UBERON:0001637,4.21e-08,42;UBERON:0003509,4.21e-08,42;UBERON:0004572,4.21e-08,42;UBERON:0003914,5.87e-08,117;UBERON:0007100,6.01e-08,27;UBERON:0000490,1.04e-07,148;UBERON:0001013,1.10e-07,14;UBERON:0007500,1.85e-07,59;UBERON:0001981,1.85e-07,59;UBERON:0004537,1.85e-07,59;UBERON:0006965,1.85e-07,59;UBERON:0000948,7.79e-07,24;UBERON:0005498,7.79e-07,24;UBERON:0004140,7.79e-07,24;UBERON:0009881,7.79e-07,24;UBERON:0004141,7.79e-07,24;UBERON:0003084,7.79e-07,24;UBERON:0007005,7.79e-07,24;UBERON:0004139,7.79e-07,24;UBERON:0004291,7.79e-07,24;UBERON:0004573,8.90e-07,33;UBERON:0004571,8.90e-07,33 | |||
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| |||
|short_description=p@chr20:35177642..35177704,+ | |||
}} |
Revision as of 11:03, 21 January 2014
Short description: | p@chr20:35177642..35177704, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35177642..35177704, + |
Coexpression cluster: | C384_Adipocyte_smooth_bladder_left_aorta_Osteoblast_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 8.65e-14 | 43 |
smooth muscle myoblast | 8.65e-14 | 43 |
muscle precursor cell | 6.95e-13 | 58 |
myoblast | 6.95e-13 | 58 |
multi-potent skeletal muscle stem cell | 6.95e-13 | 58 |
muscle cell | 2.59e-12 | 55 |
fibroblast | 8.08e-12 | 76 |
electrically responsive cell | 3.78e-11 | 61 |
electrically active cell | 3.78e-11 | 61 |
vascular associated smooth muscle cell | 3.97e-11 | 32 |
fat cell | 5.31e-10 | 15 |
preadipocyte | 2.24e-07 | 12 |
mesodermal cell | 2.27e-07 | 121 |