FFCP PHASE1:Hg19::chr20:31407751..31407795,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22919 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6890 | |||
|TSSclassifier=strong | |||
|UniProt=Q15691 | |||
|association_with_transcript=52bp_to_ENST00000375571,NM_012325,uc002wyh.2_5end | |||
|coexpression_cluster_id=C4022 | |||
|description=CAGE_peak_1_at_MAPRE1_5end | |||
|id=chr20:31407751..31407795,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.19e-41!140;CL:0000766!3.70e-37!76;CL:0000839!6.75e-32!70;CL:0000557!1.17e-31!71;CL:0002031!1.29e-31!124;CL:0002009!5.47e-30!65;CL:0000037!2.11e-29!172;CL:0000566!2.11e-29!172;CL:0002194!7.83e-29!63;CL:0000576!7.83e-29!63;CL:0000040!7.83e-29!63;CL:0000559!7.83e-29!63;CL:0002087!8.62e-29!119;CL:0002032!4.80e-27!165;CL:0000837!4.80e-27!165;CL:0002057!1.87e-25!42;CL:0000988!4.11e-25!182;CL:0000763!3.15e-24!112;CL:0000049!3.15e-24!112;CL:0000860!5.67e-24!45;CL:0000034!6.52e-22!444;CL:0000723!2.34e-20!436;CL:0000048!3.02e-20!430;CL:0000219!1.80e-17!390;CL:0000003!9.18e-17!722;CL:0000134!1.34e-16!358;CL:0000144!2.83e-16!625;CL:0000012!8.11e-15!682;CL:0002320!3.72e-14!365;CL:0000548!9.95e-14!679;CL:0000004!9.95e-14!679;CL:0000255!9.95e-14!679;CL:0002371!7.04e-13!591;CL:0000063!1.45e-09!578;CL:0000451!1.37e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.54e-19;33!CL:0002057;1.54e-19;33!CL:0000473;5.18e-18;39!CL:0000234;5.18e-18;39!CL:0000576;9.80e-17;48!CL:0000766;4.07e-16;69!CL:0000738;2.04e-09;136!CL:0002087;1.32e-08;104!CL:0000451;1.38e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.59e-42,136;CL:0000766,1.79e-38,72;CL:0000839,4.07e-33,66;CL:0000557,7.67e-33,67;CL:0002031,4.00e-32,120;CL:0002009,3.08e-31,61;CL:0002194,4.49e-30,59;CL:0000576,4.49e-30,59;CL:0000040,4.49e-30,59;CL:0000559,4.49e-30,59;CL:0000037,1.24e-29,168;CL:0002087,2.86e-29,115;CL:0000473,2.30e-27,48;CL:0000234,2.30e-27,48;CL:0002032,2.87e-27,161;CL:0000837,2.87e-27,161;CL:0000988,6.99e-26,177;CL:0000860,1.87e-25,42;CL:0002057,1.87e-25,42;CL:0000763,1.21e-24,108;CL:0000049,1.21e-24,108;CL:0000034,6.71e-22,441;CL:0000723,2.38e-20,433;CL:0000048,3.05e-20,427;CL:0000219,7.57e-18,386;CL:0000134,5.45e-17,354;CL:0002320,1.66e-14,361;CL:0000451,1.37e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.68e-18;42!CL:0000049;8.31e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.42e-28!102;UBERON:0003061!8.42e-28!102;UBERON:0002193!2.03e-25!112;UBERON:0002371!7.32e-25!80;UBERON:0001474!1.44e-24!86;UBERON:0004765!4.02e-21!101;UBERON:0001434!4.02e-21!101;UBERON:0002405!3.71e-18!115;UBERON:0002384!5.77e-14!375;UBERON:0002204!1.33e-13!167;UBERON:0003081!6.51e-09!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.17e-28,98;UBERON:0003061,2.17e-28,98;UBERON:0002193,7.25e-26,108;UBERON:0002371,1.35e-25,76;UBERON:0001474,3.23e-25,82;UBERON:0002405,2.58e-23,93;UBERON:0004765,5.06e-22,90;UBERON:0001434,2.09e-19,100;UBERON:0002384,2.63e-14,371;UBERON:0002204,4.83e-12,167;UBERON:0003081,4.68e-11,203;UBERON:0000926,1.19e-08,315;UBERON:0004120,1.19e-08,315;UBERON:0006603,1.19e-08,315 | |||
|phase1_expression=85.2071598778911,46.6739142082343,84.8545512657746,68.0498428801287,55.4231757089837,88.9785294582376,50.6599756336621,51.1693097475733,29.5139759865818,36.3686226022233,10.4670175195864,26.4314060277508,17.6723875413064,32.1792517696121,18.8896504164912,61.1815883271115,54.8452020501819,67.1885283156383,45.8656830863077,29.3028118222755,18.7680635944713,13.7920077450359,106.766023199884,60.6353703072877,76.9576380716141,47.5291383752257,53.4474837319147,54.5465714503797,143.971325326699,135.875606926413,137.476717504675,29.4214791833257,28.3133563651555,25.1432726913416,66.3119236967382,87.5762472122517,52.8480790802725,114.677049566099,74.2014455639524,84.6342395791822,88.2226968505302,74.4955431843653,80.3635771018662,104.250537204948,106.938892063933,94.3651998020605,161.770609686356,146.37576813577,157.950249156503,191.890825678874,164.199012885154,213.779935819281,173.062331729782,134.260814185436,167.928843376984,140.240542959241,138.909230379443,202.026412516131,218.543899152824,203.148074139167,178.375058097933,114.45840116479,113.295357529087,109.11353613637,283.244216901498,233.195327348058,221.724720642425,164.065378412653,137.671490462933,177.00890843467,187.673845816344,221.334859228526,233.549241931373,109.430238309586,121.609659580005,97.9105874524115,85.3697596713363,106.625593917469,101.578570792555,86.3588613535983,96.2756717643596,101.378605339372,52.7988733383968,45.3295047347569,50.7020274702226,52.4878173756804,52.0514783146816,51.7277195959035,49.5783654588647,40.0702576904853,66.028704416696,98.6558478143177,81.806470818799,105.737062863221,126.674935233827,62.1586440069182,95.2075287350952,71.9209695830971,84.2966145897988,67.0417846516619,73.6584322591914,59.1809757168417,44.8101475338196,76.5389838801142,76.008324128508,69.7831767938407,64.1805157123087,52.9017150467038,52.8040951093106,45.5492995752183,50.8484032725961,71.2915590908229,60.7974908964448,67.152747850518,49.1316961883391,70.8183391859789,56.7166330530843,73.1926458878002,71.0985334574803,47.1476813199663,55.993177031652,57.0271226669025,60.5311978692647,67.7049173006873,57.4681342140791,57.0633177426081,59.9423437752364,98.3840906936694,65.7902881627428,68.2122942287983,7.31420598941885,39.5713507225145,81.7041770180159,56.7459469243769,42.1123844934147,33.6043923989111,76.3474509169055,25.3050132557371,73.4535529364807,58.0931021351918,57.0047759148388,39.0972540360672,13.4789256668241,20.3931443531436,119.757988258578,110.572383185035,90.9432449949038,117.098896533923,130.986834568649,120.723687932109,72.5482786888474,55.055014086792,49.641091729886,47.4858671216168,41.5304441847807,48.4207753814519,61.2355251952855,71.0646087715654,58.7014333433072,75.9815790975801,61.6328855176995,63.1025847746365,42.7108600709297,72.0619637477903,47.7983749250238,82.1557500213534,49.1719326051312,58.2201354098776,45.994991239765,55.0574082549515,51.8460935323053,206.895255374619,197.767934715646,16.5715739814163,53.6729707830944,81.8033105353185,45.8135765613737,35.5677409728529,52.1362521831585,50.4609840128076,59.7794376086348,39.4668077467456,48.2377104869638,51.1900553864815,58.8462851208451,31.1796300948559,33.9943795443199,16.6368216601996,39.6443297574507,65.0337876560672,39.9027977073309,53.1978278856255,61.9973376929944,67.837739637186,56.9590137801152,52.3274191748132,27.8979609174567,51.0841228631283,39.8099756138477,11.8320977051943,10.7792721272436,87.0297709142522,54.5516746641764,68.157772409109,46.9706054342497,62.217022547201,36.8083244321162,92.2203649090971,62.9657621267906,57.0198228145575,68.665935975698,48.9148486617576,59.6674144290561,39.9342837070725,57.3239917501297,59.7468216134082,86.9138086037892,51.7489237200435,50.7194941519069,36.8553009546891,48.2813045822596,103.170148585104,100.549431240119,55.4658648578662,59.7314004093928,61.9497926040248,63.1823797751304,66.3974139290641,60.072268463541,48.5133737471934,58.5384374031458,69.7106755834835,31.2899064659632,42.4539019207304,41.4404764057442,33.4344908183025,30.3189382301226,34.072358411475,30.8509982842926,32.7775000641535,34.3014255197745,32.8997960579533,30.8451804844426,34.9213088134826,33.5538705364342,27.7017953001401,29.5262181849859,7.01208869017229,26.752310736541,14.7008711385542,8.87285243752816,12.7767538168091,12.4065880403095,100.212123567126,99.4976467813789,71.7153447047837,57.0701484124853,32.5965084447097,49.9628992885805,53.8864750822642,36.164721889446,12.4792174233549,47.6293428683402,61.6749754467409,68.6840861279557,60.3451751641289,56.4842325343465,64.1156493030596,20.5453143469412,30.0470156733205,93.0700283010362,116.76812830448,73.1265318460543,69.363037150215,100.957259047515,95.1310902496413,69.4078550947074,72.6584846284905,42.1720947081732,148.291634606679,96.8532774145487,129.165415981901,183.752940606626,114.880614418006,68.6412237298347,46.2205994925516,46.8869788840188,42.7681115056763,54.3957436400581,53.7614073540612,39.1582212703892,44.8524337381443,54.9309686729933,76.1251406821461,50.41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| |||
|short_description=p1@MAPRE1 | |||
}} |
Revision as of 10:47, 21 January 2014
Short description: | p1@MAPRE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAPRE1_5end |
Coexpression cluster: | C4022_CD14_Eosinophils_Neutrophils_Basophils_migratory_epidermoid_Mast |
Association with transcript: | 52bp_to_ENST00000375571, NM_012325, uc002wyh.2_5end |
EntrezGene: | MAPRE1 |
HGNC: | 6890 |
UniProt: | Q15691 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.59e-42 | 136 |
myeloid leukocyte | 1.79e-38 | 72 |
myeloid lineage restricted progenitor cell | 4.07e-33 | 66 |
granulocyte monocyte progenitor cell | 7.67e-33 | 67 |
hematopoietic lineage restricted progenitor cell | 4.00e-32 | 120 |
macrophage dendritic cell progenitor | 3.08e-31 | 61 |
monopoietic cell | 4.49e-30 | 59 |
monocyte | 4.49e-30 | 59 |
monoblast | 4.49e-30 | 59 |
promonocyte | 4.49e-30 | 59 |
hematopoietic stem cell | 1.24e-29 | 168 |
nongranular leukocyte | 2.86e-29 | 115 |
defensive cell | 2.30e-27 | 48 |
phagocyte | 2.30e-27 | 48 |
hematopoietic oligopotent progenitor cell | 2.87e-27 | 161 |
hematopoietic multipotent progenitor cell | 2.87e-27 | 161 |
hematopoietic cell | 6.99e-26 | 177 |
classical monocyte | 1.87e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.87e-25 | 42 |
myeloid cell | 1.21e-24 | 108 |
common myeloid progenitor | 1.21e-24 | 108 |
stem cell | 6.71e-22 | 441 |
somatic stem cell | 2.38e-20 | 433 |
multi fate stem cell | 3.05e-20 | 427 |
motile cell | 7.57e-18 | 386 |
mesenchymal cell | 5.45e-17 | 354 |
connective tissue cell | 1.66e-14 | 361 |
dendritic cell | 1.37e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.17e-28 | 98 |
blood island | 2.17e-28 | 98 |
hemolymphoid system | 7.25e-26 | 108 |
bone marrow | 1.35e-25 | 76 |
bone element | 3.23e-25 | 82 |
immune system | 2.58e-23 | 93 |
skeletal element | 5.06e-22 | 90 |
skeletal system | 2.09e-19 | 100 |
connective tissue | 2.63e-14 | 371 |
musculoskeletal system | 4.83e-12 | 167 |
lateral plate mesoderm | 4.68e-11 | 203 |
mesoderm | 1.19e-08 | 315 |
mesoderm-derived structure | 1.19e-08 | 315 |
presumptive mesoderm | 1.19e-08 | 315 |