FFCP PHASE1:Hg19::chr20:4795556..4795568,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3456 | |||
|description=CAGE_peak_at_chr20:4795556..4795568,+ | |||
|id=chr20:4795556..4795568,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.39e-75!140;CL:0002057!1.99e-65!42;CL:0000037!1.44e-64!172;CL:0000566!1.44e-64!172;CL:0000766!1.05e-63!76;CL:0000988!3.56e-62!182;CL:0000860!2.08e-60!45;CL:0002087!7.67e-57!119;CL:0002031!1.01e-56!124;CL:0002032!7.43e-55!165;CL:0000837!7.43e-55!165;CL:0000557!2.99e-52!71;CL:0000839!1.97e-50!70;CL:0002009!2.84e-48!65;CL:0002194!2.35e-47!63;CL:0000576!2.35e-47!63;CL:0000040!2.35e-47!63;CL:0000559!2.35e-47!63;CL:0000763!1.86e-45!112;CL:0000049!1.86e-45!112;CL:0000134!9.29e-23!358;CL:0002320!5.17e-22!365;CL:0000219!2.20e-19!390;CL:0002393!2.77e-18!9;CL:0002397!2.77e-18!9;CL:0000048!3.07e-16!430;CL:0000034!4.95e-16!444;CL:0000723!8.58e-16!436;CL:0000094!5.95e-13!8;CL:0000081!4.66e-12!11;CL:0000623!1.05e-09!3;CL:0000825!1.05e-09!3;CL:0000767!1.31e-09!3;CL:0000838!2.36e-09!52;CL:0000542!4.17e-09!53;CL:0000051!4.17e-09!53;CL:0000842!9.49e-09!3;CL:0000784!2.15e-08!3;CL:0000791!2.18e-08!18;CL:0000789!2.18e-08!18;CL:0002420!2.18e-08!18;CL:0002419!2.18e-08!18;CL:0000790!2.18e-08!18;CL:0000063!6.49e-08!578;CL:0002371!7.39e-08!591;CL:0000624!1.79e-07!6;CL:0000080!3.04e-07!6;CL:0000771!3.25e-07!2;CL:0000144!4.31e-07!625;CL:0000084!4.56e-07!25;CL:0000827!4.56e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.74e-24;3!CL:0000771;1.37e-17;2!CL:0000094;7.06e-17;8!CL:0000097;1.42e-15;5!CL:0000766;7.50e-15;69!CL:0000860;6.28e-13;33!CL:0002057;6.28e-13;33!CL:0002393;8.97e-13;6!CL:0002397;8.97e-13;6!CL:0000081;2.52e-12;11!CL:0000767;4.01e-12;3!CL:0000576;5.32e-10;48!CL:0002087;1.99e-09;104!CL:0000473;4.57e-09;39!CL:0000234;4.57e-09;39!CL:0000763;5.46e-09;100!CL:0000163;7.04e-09;9!CL:0000738;4.38e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.11e-33,136;CL:0000766,2.07e-32,72;CL:0002032,3.44e-27,161;CL:0000837,3.44e-27,161;CL:0000037,6.55e-26,168;CL:0002031,1.92e-25,120;CL:0000623,9.49e-25,3;CL:0000825,9.49e-25,3;CL:0000988,2.06e-24,177;CL:0000860,8.27e-21,42;CL:0002057,8.27e-21,42;CL:0000839,9.68e-21,66;CL:0000763,1.15e-20,108;CL:0000049,1.15e-20,108;CL:0000557,2.12e-20,67;CL:0002087,7.40e-19,115;CL:0000473,5.52e-18,48;CL:0000234,5.52e-18,48;CL:0000771,1.16e-17,2;CL:0000094,6.93e-17,8;CL:0000097,1.45e-15,5;CL:0002028,1.45e-15,5;CL:0002194,4.99e-14,59;CL:0000576,4.99e-14,59;CL:0000040,4.99e-14,59;CL:0000559,4.99e-14,59;CL:0002009,1.62e-13,61;CL:0000081,2.48e-12,11;CL:0000767,4.35e-12,3;CL:0000134,2.56e-10,354;CL:0002320,4.84e-10,361;CL:0000219,4.58e-09,386;CL:0000163,7.14e-09,9;CL:0002393,1.12e-08,9;CL:0002397,1.12e-08,9;CL:0000048,7.22e-08,427;CL:0000723,1.06e-07,433;CL:0000034,1.73e-07,441;CL:0000838,9.70e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;6.96e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.95e-48!80;UBERON:0002390!1.31e-45!102;UBERON:0003061!1.31e-45!102;UBERON:0001474!1.24e-43!86;UBERON:0002193!1.87e-40!112;UBERON:0004765!1.62e-35!101;UBERON:0001434!1.62e-35!101;UBERON:0002405!1.48e-31!115;UBERON:0002384!5.38e-21!375;UBERON:0002204!3.63e-17!167;UBERON:0003081!3.35e-15!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.00e-17,76;UBERON:0001474,2.89e-16,82;UBERON:0004765,1.29e-14,90;UBERON:0002405,4.53e-14,93;UBERON:0002390,3.11e-13,98;UBERON:0003061,3.11e-13,98;UBERON:0001434,6.37e-13,100;UBERON:0002193,8.63e-12,108;UBERON:0002384,1.15e-09,371;UBERON:0002204,8.89e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,5.90046415273356,0.767658796194425,3.09632246632152,0,0,0,0.0774672005803016,0,0.587200878669695,2.21598163412751,2.00544447470142,2.38711957787437,0,0,0,0.290796477559129,0,0,0.929716147622738,0,0.309706370895104,0,0,0.945928919554341,0.344745680736619,1.29096936716765,1.35426486594342,0.376484679085209,0.545812300115692,0.449446968890169,0.918251677112708,0.962787081228281,1.27867425159808,0,0.598390972864896,0,0.580418477257168,1.13477044938228,1.24564449799115,0.502497330513487,0.521482918420201,0.434377689410233,1.21079900526674,1.10483290796269,2.84816148696796,0.211255286311942,0.850417199860174,0.628975936525128,0.22465726229299,0.450530678524519,0.16072558669708,0.285012743741249,0,0.365328307529268,1.75996244461323,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0.786839080455332,0.786021525498329,1.23360899399706,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0.759059076058509,0,0,0,0,0.127986611154418,0,0,0,2.01606743224732,1.33720097891754,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,6.01251535068239,4.03535869567492,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57624608161542,3.23441362289276,1.66845947163673,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:4795556..4795568,+ | |||
}} |
Revision as of 10:03, 21 January 2014
Short description: | p@chr20:4795556..4795568, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:4795556..4795568, + |
Coexpression cluster: | C3456_Basophils_Eosinophils_Mast_CD14_CD34_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.00e-17 | 76 |
bone element | 2.89e-16 | 82 |
skeletal element | 1.29e-14 | 90 |
immune system | 4.53e-14 | 93 |
hematopoietic system | 3.11e-13 | 98 |
blood island | 3.11e-13 | 98 |
skeletal system | 6.37e-13 | 100 |
hemolymphoid system | 8.63e-12 | 108 |
connective tissue | 1.15e-09 | 371 |
musculoskeletal system | 8.89e-07 | 167 |