FFCP PHASE1:Hg19::chr20:4228567..4228605,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_at_chr20:4228567..4228605,- | |||
|id=chr20:4228567..4228605,- | |||
|ontology_enrichment_celltype=CL:0002319!7.95e-08!25;CL:0002601!9.44e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.44e-23;5!CL:0000047;2.37e-15;2!CL:0002321;1.53e-08;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!2.26e-23!10;DOID:3095!2.57e-10!22;DOID:2994!2.57e-10!22;DOID:3093!1.74e-08!11 | |||
|ontology_enrichment_disease_v019=DOID:171;1.91e-70;10!DOID:3095;2.24e-32;22!DOID:2994;2.24e-32;22!DOID:169;7.84e-20;6!DOID:3193;2.37e-15;2!DOID:962;2.37e-15;2!DOID:1192;1.09e-10;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.05e-70,10;DOID:3095,2.31e-32,22;DOID:2994,2.31e-32,22;DOID:169,8.63e-20,6;DOID:3193,2.74e-15,2;DOID:962,2.74e-15,2;DOID:1192,1.20e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0000989!8.28e-08!1;UBERON:0008811!8.28e-08!1;UBERON:0006258!8.28e-08!1;UBERON:0005876!8.28e-08!1;UBERON:0004874!8.28e-08!1;UBERON:0002902!2.80e-07!1;UBERON:0009899!2.80e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;6.88e-64;4!UBERON:0000923;6.88e-64;4!UBERON:0010316;6.88e-64;4!UBERON:0005291;6.88e-64;4!UBERON:0002050;2.51e-51;5!UBERON:0005423;2.51e-51;5!UBERON:0000013;1.44e-23;5!UBERON:0002410;1.44e-23;5!UBERON:0003714;2.37e-15;2!UBERON:0000010;1.40e-13;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.61e-23,5;UBERON:0002410,1.61e-23,5;UBERON:0003714,2.74e-15,2;UBERON:0000010,1.49e-13,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08246458736556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18977608124458,0,0.848662649770126,4.67664824223702,7.80795314831714,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,1.23109871051734,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:4228567..4228605,- | |||
}} |
Revision as of 10:01, 21 January 2014
Short description: | p@chr20:4228567..4228605, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:4228567..4228605, - |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.61e-23 | 5 |
autonomic nervous system | 1.61e-23 | 5 |
neural tissue | 2.74e-15 | 2 |
peripheral nervous system | 1.49e-13 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.05e-70 | 10 |
germ cell and embryonal cancer | 2.31e-32 | 22 |
germ cell cancer | 2.31e-32 | 22 |
neuroendocrine tumor | 8.63e-20 | 6 |
peripheral nerve sheath neoplasm | 2.74e-15 | 2 |
neurofibroma | 2.74e-15 | 2 |
peripheral nervous system neoplasm | 1.20e-10 | 3 |