FFCP PHASE1:Hg19::chr20:4228155..4228166,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_at_chr20:4228155..4228166,+ | |||
|id=chr20:4228155..4228166,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.14e-23;5!CL:0002321;1.75e-08;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!2.44e-51!10;DOID:3095!2.71e-23!22;DOID:2994!2.71e-23!22;DOID:169!1.65e-10!6;DOID:3193!1.86e-08!2;DOID:962!1.86e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:171;8.51e-101;10!DOID:3095;3.65e-46;22!DOID:2994;3.65e-46;22!DOID:169;1.09e-19;6!DOID:3193;2.55e-15;2!DOID:962;2.55e-15;2!DOID:1192;1.14e-10;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.51e-101,10;DOID:3095,3.65e-46,22;DOID:2994,3.65e-46,22;DOID:169,1.15e-19,6;DOID:3193,2.74e-15,2;DOID:962,2.74e-15,2;DOID:1192,1.20e-10,3;DOID:0050687,2.48e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000013!2.00e-12!5;UBERON:0002410!2.00e-12!5;UBERON:0003714!1.86e-08!2;UBERON:0001897!2.00e-08!2;UBERON:0000010!2.68e-07!8;UBERON:0002346!3.52e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.54e-112;4!UBERON:0000923;1.54e-112;4!UBERON:0010316;1.54e-112;4!UBERON:0005291;1.54e-112;4!UBERON:0002050;3.15e-90;5!UBERON:0005423;3.15e-90;5!UBERON:0000013;2.14e-23;5!UBERON:0002410;2.14e-23;5!UBERON:0003714;2.55e-15;2!UBERON:0000010;1.74e-13;8!UBERON:0000922;6.87e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.27e-23,5;UBERON:0002410,2.27e-23,5;UBERON:0003714,2.74e-15,2;UBERON:0000010,1.80e-13,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.74813840149763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66157390681227,0,1.18812770967818,12.754495206101,10.4106041977562,1.11728983594649,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38659226310407,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:4228155..4228166,+ | |||
}} |
Revision as of 10:01, 21 January 2014
Short description: | p@chr20:4228155..4228166, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:4228155..4228166, + |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.27e-23 | 5 |
autonomic nervous system | 2.27e-23 | 5 |
neural tissue | 2.74e-15 | 2 |
peripheral nervous system | 1.80e-13 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.51e-101 | 10 |
germ cell and embryonal cancer | 3.65e-46 | 22 |
germ cell cancer | 3.65e-46 | 22 |
neuroendocrine tumor | 1.15e-19 | 6 |
peripheral nerve sheath neoplasm | 2.74e-15 | 2 |
neurofibroma | 2.74e-15 | 2 |
peripheral nervous system neoplasm | 1.20e-10 | 3 |
cell type cancer | 2.48e-07 | 143 |