FFCP PHASE1:Hg19::chr2:241564946..241564955,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2859 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4492 | |||
|TSSclassifier=weak | |||
|UniProt=Q9HC97,A8K2J1,B2RA17 | |||
|association_with_transcript=284bp_to_ENST00000407714,NM_005301_5end | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_5_at_GPR35_5end | |||
|id=chr2:241564946..241564955,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.94e-103!42;CL:0000860!1.07e-95!45;CL:0002009!5.82e-81!65;CL:0002194!1.91e-80!63;CL:0000576!1.91e-80!63;CL:0000040!1.91e-80!63;CL:0000559!1.91e-80!63;CL:0000766!3.58e-77!76;CL:0000557!4.65e-73!71;CL:0000839!3.64e-71!70;CL:0000763!2.96e-66!112;CL:0000049!2.96e-66!112;CL:0000037!2.41e-55!172;CL:0000566!2.41e-55!172;CL:0002087!1.10e-54!119;CL:0000738!3.21e-54!140;CL:0000988!2.17e-51!182;CL:0002032!1.85e-50!165;CL:0000837!1.85e-50!165;CL:0002031!2.02e-47!124;CL:0002393!2.02e-21!9;CL:0002397!2.02e-21!9;CL:0000134!1.42e-19!358;CL:0002320!7.15e-19!365;CL:0000219!2.12e-16!390;CL:0000048!1.88e-13!430;CL:0000034!3.38e-13!444;CL:0000723!4.92e-13!436;CL:0000840!8.83e-10!5;CL:0001029!8.83e-10!5;CL:0000842!2.39e-08!3;CL:0000767!4.03e-08!3;CL:0000875!7.80e-08!3;CL:0002396!7.80e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-113;33!CL:0002057;1.22e-113;33!CL:0000473;2.70e-79;39!CL:0000234;2.70e-79;39!CL:0000576;4.29e-74;48!CL:0000766;1.98e-45;69!CL:0002393;8.06e-25;6!CL:0002397;8.06e-25;6!CL:0000763;8.11e-23;100!CL:0002087;2.60e-18;104!CL:0000738;1.56e-14;136!CL:0000988;6.18e-09;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.10e-138,42;CL:0002057,2.10e-138,42;CL:0000473,3.98e-120,48;CL:0000234,3.98e-120,48;CL:0002194,2.01e-105,59;CL:0000576,2.01e-105,59;CL:0000040,2.01e-105,59;CL:0000559,2.01e-105,59;CL:0002009,9.16e-102,61;CL:0000766,2.07e-99,72;CL:0000839,1.43e-93,66;CL:0000557,4.47e-92,67;CL:0000763,1.92e-70,108;CL:0000049,1.92e-70,108;CL:0002087,1.57e-56,115;CL:0000738,1.62e-54,136;CL:0002031,3.46e-48,120;CL:0000037,4.56e-47,168;CL:0002032,1.21e-44,161;CL:0000837,1.21e-44,161;CL:0000988,2.94e-44,177;CL:0000134,7.12e-18,354;CL:0002320,2.34e-17,361;CL:0002393,1.54e-16,9;CL:0002397,1.54e-16,9;CL:0000219,1.54e-15,386;CL:0000048,2.59e-13,427;CL:0000723,5.25e-13,433;CL:0000034,1.31e-12,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.97e-101;42!CL:0000049;2.26e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.33e-66!80;UBERON:0002390!4.38e-66!102;UBERON:0003061!4.38e-66!102;UBERON:0001474!3.10e-63!86;UBERON:0002193!4.00e-61!112;UBERON:0002405!4.51e-52!115;UBERON:0004765!7.42e-52!101;UBERON:0001434!7.42e-52!101;UBERON:0002204!4.97e-26!167;UBERON:0003081!1.43e-24!216;UBERON:0002384!6.48e-18!375;UBERON:0000926!7.35e-07!448;UBERON:0004120!7.35e-07!448;UBERON:0006603!7.35e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.27e-80,76;UBERON:0001474,5.62e-74,82;UBERON:0002390,1.17e-67,98;UBERON:0003061,1.17e-67,98;UBERON:0004765,9.25e-67,90;UBERON:0002405,2.27e-64,93;UBERON:0002193,1.08e-60,108;UBERON:0001434,2.40e-59,100;UBERON:0002204,2.08e-32,167;UBERON:0003081,1.56e-28,203;UBERON:0002384,1.18e-16,371;UBERON:0000926,2.11e-15,315;UBERON:0004120,2.11e-15,315;UBERON:0006603,2.11e-15,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,2.01260960310899,0,0,0,0,0,0.293600439334847,1.66198622559563,3.81034450193269,2.38711957787437,0,0,0,3.19876125315042,3.77875943688809,3.39617685662943,5.11343881192506,7.81218987241469,6.50383378879718,3.45230870786581,3.84241059793651,4.7296445977717,1.03423704220986,5.16387746867061,6.77132432971709,5.45902784673554,4.91231070104122,4.49446968890169,7.95818120164347,6.41858054152187,7.67204550958849,3.29851300186716,4.58766412529753,3.83602275479425,4.06292934080018,3.40431134814684,6.85104473895132,1.7587406567972,3.65038042894141,3.9093992046921,1.21079900526674,2.57794345191295,2.53169909952708,1.69004229049553,1.4882300997553,1.88692780957538,0.673971786878971,0.600707571366025,1.44653028027372,0.570025487482497,0.39783335439818,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.534880391567015,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,3.24547393654683,1.56716763569341,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.448340575974109,0.197030760201927,0,0.256686072559497,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,3.23571301227925,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561594356226918,0.228234679033192,0,0,0,0.1605880751037,1.00899853595524,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0.19924798825107,0,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469919589899268,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@GPR35 | |||
}} |
Revision as of 09:35, 21 January 2014
Short description: | p5@GPR35 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GPR35_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 284bp_to_ENST00000407714, NM_005301_5end |
EntrezGene: | GPR35 |
HGNC: | 4492 |
UniProt: | Q9HC97A8K2J1B2RA17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.10e-138 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.10e-138 | 42 |
defensive cell | 3.98e-120 | 48 |
phagocyte | 3.98e-120 | 48 |
monopoietic cell | 2.01e-105 | 59 |
monocyte | 2.01e-105 | 59 |
monoblast | 2.01e-105 | 59 |
promonocyte | 2.01e-105 | 59 |
macrophage dendritic cell progenitor | 9.16e-102 | 61 |
myeloid leukocyte | 2.07e-99 | 72 |
myeloid lineage restricted progenitor cell | 1.43e-93 | 66 |
granulocyte monocyte progenitor cell | 4.47e-92 | 67 |
myeloid cell | 1.92e-70 | 108 |
common myeloid progenitor | 1.92e-70 | 108 |
nongranular leukocyte | 1.57e-56 | 115 |
leukocyte | 1.62e-54 | 136 |
hematopoietic lineage restricted progenitor cell | 3.46e-48 | 120 |
hematopoietic stem cell | 4.56e-47 | 168 |
hematopoietic oligopotent progenitor cell | 1.21e-44 | 161 |
hematopoietic multipotent progenitor cell | 1.21e-44 | 161 |
hematopoietic cell | 2.94e-44 | 177 |
mesenchymal cell | 7.12e-18 | 354 |
connective tissue cell | 2.34e-17 | 361 |
intermediate monocyte | 1.54e-16 | 9 |
CD14-positive, CD16-positive monocyte | 1.54e-16 | 9 |
motile cell | 1.54e-15 | 386 |
multi fate stem cell | 2.59e-13 | 427 |
somatic stem cell | 5.25e-13 | 433 |
stem cell | 1.31e-12 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.27e-80 | 76 |
bone element | 5.62e-74 | 82 |
hematopoietic system | 1.17e-67 | 98 |
blood island | 1.17e-67 | 98 |
skeletal element | 9.25e-67 | 90 |
immune system | 2.27e-64 | 93 |
hemolymphoid system | 1.08e-60 | 108 |
skeletal system | 2.40e-59 | 100 |
musculoskeletal system | 2.08e-32 | 167 |
lateral plate mesoderm | 1.56e-28 | 203 |
connective tissue | 1.18e-16 | 371 |
mesoderm | 2.11e-15 | 315 |
mesoderm-derived structure | 2.11e-15 | 315 |
presumptive mesoderm | 2.11e-15 | 315 |