FFCP PHASE1:Hg19::chr2:240323336..240323355,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=9759 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14063 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000493582,uc010fza.2_5end | |||
|description=CAGE_peak_2_at_HDAC4_5end | |||
|id=chr2:240323336..240323355,- | |||
|ontology_enrichment_celltype=CL:0002087!2.75e-09!119;CL:0002031!1.50e-08!124;CL:0000738!7.00e-08!140 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.45e-09,115;CL:0002031,5.53e-08,120;CL:0000738,3.09e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.58e-18!115;UBERON:0001049!5.14e-15!57;UBERON:0005068!5.14e-15!57;UBERON:0006241!5.14e-15!57;UBERON:0007135!5.14e-15!57;UBERON:0003080!2.80e-13!42;UBERON:0001017!3.91e-13!82;UBERON:0002780!8.27e-13!41;UBERON:0001890!8.27e-13!41;UBERON:0006240!8.27e-13!41;UBERON:0002616!1.14e-12!59;UBERON:0001893!2.06e-12!34;UBERON:0000955!2.32e-12!69;UBERON:0006238!2.32e-12!69;UBERON:0005743!3.34e-12!86;UBERON:0002791!6.91e-12!33;UBERON:0002020!1.71e-11!34;UBERON:0003528!1.71e-11!34;UBERON:0000073!1.96e-11!94;UBERON:0001016!1.96e-11!94;UBERON:0001869!2.05e-11!32;UBERON:0002619!3.18e-09!22;UBERON:0000956!3.31e-09!25;UBERON:0000203!3.31e-09!25;UBERON:0001950!1.79e-08!20;UBERON:0002346!3.21e-08!90;UBERON:0003075!4.39e-08!86;UBERON:0007284!4.39e-08!86;UBERON:0003056!1.80e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.07e-12;34!UBERON:0002791;3.20e-12;32!UBERON:0001869;5.40e-12;32!UBERON:0002780;1.23e-11;41!UBERON:0001890;1.23e-11;41!UBERON:0003528;2.70e-11;34!UBERON:0002020;2.70e-11;34!UBERON:0000956;2.72e-11;25!UBERON:0000203;2.72e-11;25!UBERON:0002619;4.14e-11;22!UBERON:0000073;4.52e-11;53!UBERON:0002616;4.52e-11;53!UBERON:0001950;2.44e-10;20!UBERON:0007023;3.33e-07;114!UBERON:0000955;4.14e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.83e-20,114;UBERON:0001049,2.24e-17,56;UBERON:0005068,2.24e-17,56;UBERON:0006241,2.24e-17,56;UBERON:0007135,2.24e-17,56;UBERON:0000073,4.88e-17,53;UBERON:0002616,4.88e-17,53;UBERON:0002780,2.00e-15,41;UBERON:0001890,2.00e-15,41;UBERON:0003080,2.00e-15,41;UBERON:0006240,2.00e-15,41;UBERON:0001893,7.62e-15,34;UBERON:0000955,1.12e-14,68;UBERON:0006238,1.12e-14,68;UBERON:0001017,1.36e-14,81;UBERON:0001016,6.34e-14,89;UBERON:0002791,1.17e-13,32;UBERON:0001869,1.19e-13,32;UBERON:0003528,1.66e-13,34;UBERON:0002020,1.66e-13,34;UBERON:0002619,1.26e-11,22;UBERON:0000956,1.51e-11,25;UBERON:0000203,1.51e-11,25;UBERON:0001950,9.81e-11,20;UBERON:0002346,2.61e-10,86;UBERON:0003075,3.21e-10,82;UBERON:0007284,3.21e-10,82;UBERON:0003056,3.39e-08,61 | |||
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| |||
|short_description=p2@HDAC4 | |||
}} |
Revision as of 09:32, 21 January 2014
Short description: | p2@HDAC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HDAC4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000493582, uc010fza.2_5end |
EntrezGene: | HDAC4 |
HGNC: | 14063 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 3.45e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 5.53e-08 | 120 |
leukocyte | 3.09e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.83e-20 | 114 |
neural tube | 2.24e-17 | 56 |
neural rod | 2.24e-17 | 56 |
future spinal cord | 2.24e-17 | 56 |
neural keel | 2.24e-17 | 56 |
regional part of nervous system | 4.88e-17 | 53 |
regional part of brain | 4.88e-17 | 53 |
regional part of forebrain | 2.00e-15 | 41 |
forebrain | 2.00e-15 | 41 |
anterior neural tube | 2.00e-15 | 41 |
future forebrain | 2.00e-15 | 41 |
telencephalon | 7.62e-15 | 34 |
brain | 1.12e-14 | 68 |
future brain | 1.12e-14 | 68 |
central nervous system | 1.36e-14 | 81 |
nervous system | 6.34e-14 | 89 |
regional part of telencephalon | 1.17e-13 | 32 |
cerebral hemisphere | 1.19e-13 | 32 |
brain grey matter | 1.66e-13 | 34 |
gray matter | 1.66e-13 | 34 |
regional part of cerebral cortex | 1.26e-11 | 22 |
cerebral cortex | 1.51e-11 | 25 |
pallium | 1.51e-11 | 25 |
neocortex | 9.81e-11 | 20 |
neurectoderm | 2.61e-10 | 86 |
neural plate | 3.21e-10 | 82 |
presumptive neural plate | 3.21e-10 | 82 |
pre-chordal neural plate | 3.39e-08 | 61 |