FFCP PHASE1:Hg19::chr2:238066183..238066194,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:238066183..238066194,- | |||
|id=chr2:238066183..238066194,- | |||
|ontology_enrichment_celltype=CL:0000057!1.27e-12!75;CL:0002556!9.10e-11!6;CL:0000055!4.12e-10!180;CL:0002549!1.01e-09!2;CL:0002575!1.10e-09!2;CL:0002602!4.08e-09!2;CL:0002552!5.88e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002549;1.67e-26;2!CL:0002575;2.15e-26;2!CL:0002603;1.39e-17;3!CL:0000669;1.04e-13;4!CL:0002552;8.71e-11;5!CL:0000128;4.58e-08;7!CL:0000126;4.58e-08;7!CL:0000127;4.58e-08;7!CL:0002363;1.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,1.67e-26,2;CL:0002575,2.16e-26,2;CL:0002603,1.64e-17,3;CL:0000669,1.04e-13,4;CL:0002552,6.80e-11,5;CL:0000128,4.92e-08,7;CL:0000126,4.92e-08,7;CL:0000127,4.92e-08,7;CL:0002453,4.92e-08,7;CL:0002363,2.25e-07,2;CL:0000008,2.25e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;1.87e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005284!1.02e-13!5;UBERON:0002200!5.43e-13!11;UBERON:0006876!5.43e-13!11;UBERON:0001758!9.10e-11!6;UBERON:0003672!9.10e-11!6;UBERON:0000075!1.72e-10!13;UBERON:0005944!1.72e-10!13;UBERON:0004288!1.72e-10!13;UBERON:0003089!1.72e-10!13;UBERON:0003947!1.01e-09!2;UBERON:0005629!1.01e-09!2;UBERON:0005358!1.01e-09!2;UBERON:0001886!1.01e-09!2;UBERON:0004086!1.01e-09!2;UBERON:0005282!1.01e-09!2;UBERON:0005281!1.01e-09!2;UBERON:0009568!4.08e-09!2;UBERON:0002216!4.08e-09!2;UBERON:0002209!4.08e-09!2;UBERON:0002213!4.08e-09!2;UBERON:0004267!4.08e-09!2;UBERON:0006444!4.08e-09!2;UBERON:0001995!4.08e-09!2;UBERON:0004715!4.08e-09!2;UBERON:0001468!4.08e-09!2;UBERON:0001130!4.08e-09!2;UBERON:0001066!4.08e-09!2;UBERON:0005174!5.88e-08!5;UBERON:0001137!5.88e-08!5;UBERON:0002300!9.96e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;1.67e-26;2!UBERON:0005358;1.67e-26;2!UBERON:0001886;1.67e-26;2!UBERON:0004086;1.67e-26;2!UBERON:0005282;1.67e-26;2!UBERON:0005281;1.67e-26;2!UBERON:0005284;1.51e-23;5!UBERON:0006876;4.81e-11;11!UBERON:0002037;2.89e-09;6!UBERON:0003566;1.87e-07;2!UBERON:0001777;1.87e-07;2!UBERON:0001828;4.55e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.67e-26,2;UBERON:0005358,1.67e-26,2;UBERON:0001886,1.67e-26,2;UBERON:0004086,1.67e-26,2;UBERON:0005282,1.67e-26,2;UBERON:0005281,1.67e-26,2;UBERON:0005284,1.51e-23,5;UBERON:0006876,4.81e-11,11;UBERON:0002037,3.14e-09,6;UBERON:0006215,3.14e-09,6;UBERON:0003076,5.00e-08,15;UBERON:0003057,5.00e-08,15;UBERON:0003566,2.25e-07,2;UBERON:0001777,2.25e-07,2;UBERON:0004121,2.82e-07,171;UBERON:0000924,2.82e-07,171;UBERON:0006601,2.82e-07,171;UBERON:0001828,3.90e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.74259811776028,0.662794751455832,0,0,0,0,1.10808952269109,4.08001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47601594811616,10.37116664064,0,0,0,0,0,0.647491777472526,0.280901613404497,1.63323337003915,0.368502951935304,1.85986406116378,0,0,0,0,0.673344455816265,0.375355559615893,2.49357703935765,0,0,0.150238058906597,0,0,0,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,1.23344192779897,0,0.36669142910475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0,0,0,0,0,0,0,0.184369168541703,0,12.5312740776154,3.43143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,6.32669227911434,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,1.76097531226803,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6906229103336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:238066183..238066194,- | |||
}} |
Revision as of 09:24, 21 January 2014
Short description: | p@chr2:238066183..238066194, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238066183..238066194, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 1.67e-26 | 2 |
central nervous system pericyte | 2.16e-26 | 2 |
astrocyte of the cerebellum | 1.64e-17 | 3 |
pericyte cell | 1.04e-13 | 4 |
fibroblast of gingiva | 6.80e-11 | 5 |
oligodendrocyte | 4.92e-08 | 7 |
macroglial cell | 4.92e-08 | 7 |
astrocyte | 4.92e-08 | 7 |
oligodendrocyte precursor cell | 4.92e-08 | 7 |
keratocyte | 2.25e-07 | 2 |
migratory cranial neural crest cell | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 1.67e-26 | 2 |
ventricle of nervous system | 1.67e-26 | 2 |
choroid plexus | 1.67e-26 | 2 |
brain ventricle | 1.67e-26 | 2 |
ventricular system of brain | 1.67e-26 | 2 |
ventricular system of central nervous system | 1.67e-26 | 2 |
brain vasculature | 1.51e-23 | 5 |
vasculature of organ | 4.81e-11 | 11 |
cerebellum | 3.14e-09 | 6 |
rhombic lip | 3.14e-09 | 6 |
posterior neural tube | 5.00e-08 | 15 |
chordal neural plate | 5.00e-08 | 15 |
head connective tissue | 2.25e-07 | 2 |
substantia propria of cornea | 2.25e-07 | 2 |
ectoderm-derived structure | 2.82e-07 | 171 |
ectoderm | 2.82e-07 | 171 |
presumptive ectoderm | 2.82e-07 | 171 |
gingiva | 3.90e-07 | 8 |