FFCP PHASE1:Hg19::chr2:235405168..235405277,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10123 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=698 | |||
|TSSclassifier=strong | |||
|UniProt=P56559 | |||
|association_with_transcript=0bp_to_ENST00000339728,uc002vvm.3_5end | |||
|coexpression_cluster_id=C4201 | |||
|description=CAGE_peak_2_at_ARL4C_5end | |||
|id=chr2:235405168..235405277,- | |||
|ontology_enrichment_celltype=CL:0000738!1.01e-16!140;CL:0000791!3.23e-12!18;CL:0000789!3.23e-12!18;CL:0002420!3.23e-12!18;CL:0002419!3.23e-12!18;CL:0000790!3.23e-12!18;CL:0000084!4.51e-12!25;CL:0000827!4.51e-12!25;CL:0002087!5.62e-10!119;CL:0002031!1.16e-09!124;CL:0000838!1.70e-08!52;CL:0000542!2.23e-08!53;CL:0000051!2.23e-08!53;CL:0000625!6.28e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.20e-12;18!CL:0000789;1.20e-12;18!CL:0002419;1.20e-12;18!CL:0000084;1.37e-12;25!CL:0000625;3.48e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.49e-21,136;CL:0002087,5.81e-13,115;CL:0002031,7.64e-13,120;CL:0000791,1.25e-12,18;CL:0000789,1.25e-12,18;CL:0002420,1.25e-12,18;CL:0002419,1.25e-12,18;CL:0000790,1.25e-12,18;CL:0000084,1.76e-12,25;CL:0000827,1.76e-12,25;CL:0000838,1.46e-09,52;CL:0000542,2.00e-09,53;CL:0000051,2.00e-09,53;CL:0000037,4.72e-09,168;CL:0000988,1.80e-08,177;CL:0000625,3.56e-08,11;CL:0002032,2.64e-07,161;CL:0000837,2.64e-07,161;CL:0000766,3.10e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;1.20e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!5.26e-08!129;UBERON:0007811!5.26e-08!129;UBERON:0000033!4.52e-07!123;UBERON:0002390!5.45e-07!102;UBERON:0003061!5.45e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.42e-09,98;UBERON:0003061,2.42e-09,98;UBERON:0002193,1.72e-07,108 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0.491467873003018,0,2.40285509343189,3.69273769519835,0.495065411840187,0.331397375727916,1.34465029290355,1.80808358407193,0.730310090387373,0,14.528284853061,5.50801866359483,14.7323719094701,2.57612388417951,5.2012281527696,4.6450776650077,0.152826811495903,0,0,104.24153336496,116.684137021553,49.0767110911961,12.871897142705,5.12050061923025,4.06729411183466,0,0,1.76160263600908,31.0237428777851,40.7105228364388,34.5047284438204,6.04571780447796,7.12566065241755,4.37878464978117,8.28769961043519,8.69114670484262,4.36651310138069,5.11343881192506,6.98985409637104,8.3620720141678,3.16461631554365,7.94098190240212,2.60130452877444,4.13694816883942,2.5819387343353,2.70852973188684,12.8004790888971,13.0994952027766,8.09004544002305,4.59125838556354,9.62787081228281,3.19668562899521,3.29851300186716,9.3747919082167,2.98357325372886,1.45104619314292,0,0.622822248995575,4.52247597462138,7.82224377630302,4.12658804939722,1.81619850790011,3.68277635987565,0,10.3515090292851,8.2915676986367,11.740884148469,5.84108881961775,6.60778328502628,6.10757229448904,4.27519115611873,2.98375015798635,3.47061892152804,17.5996244461323,21.2994058392231,16.011166569544,11.9484462318622,14.8146515203325,18.3920780785435,16.5261218196216,17.1729675816366,40.4141208067708,54.6130586114973,61.1637165000366,22.4691258584344,27.4649195860953,1.05353633910031,94.8141091948675,127.335487130729,169.004432177597,115.191495324177,113.746871055123,99.424039204294,77.9306913631645,89.1283655081389,114.307092100237,106.779337189305,102.093056639411,103.113512379169,120.434955840447,64.1307827954337,77.6543549978234,68.6833313192074,100.241716697553,85.3455241606185,94.0819714244791,65.832728107286,129.528526837449,127.485782274056,112.08772356464,57.3417745783374,52.7377597623699,77.9370676447667,29.3621482201657,38.3959833463255,68.7118996037902,56.826540490564,75.5437757167363,157.454866458516,158.59203609962,109.921722547044,0,0.670700859703636,0.383587685530591,1.80719576192283,4.51204119572301,1.44846518960824,3.9764297352555,0.973269740605272,7.37371573879729,13.0820344502913,16.1616005675352,3.27447688744282,7.65020105414339,4.07862887062872,5.8418530857843,6.61693001737215,4.78648657867915,159.788718284579,268.83760806666,139.668020499916,0,0.860234595106124,0,0.56530794192401,0,0,0.417989933073621,1.03366703667732,1.42306505074684,1.00416183829401,3.62546385398232,0.760272105718513,2.19655851793353,0.367663080345869,0,0.267899184852239,0.22452937262617,0.450445921933289,0,0,0.366403487860815,31.6273001846552,15.511210565933,3.48875241714027,2.48485975847659,3.92554586160197,13.7705548045748,2.29469296599051,6.73869926176878,8.97084160227691,0,2.4666754841716,0.622422070799533,0.134710672069688,0.326923806226917,1.36221684880438,1.15235184896,0.70296429550139,0.624320153660641,0.570471821544449,0.149448680551801,0,0.647491777472526,1.68540968042698,0,0.859840221182376,0.826606249406124,1.18800285728205,2.71993622206413,0.910161361938026,0,1.34668891163253,0.250237039743928,0,4.82875382968922,6.43624371177941,3.45547535485173,1.47461838108027,0.179389635688862,2.34913127700424,2.11931901159562,0.300091096084402,0.824420233907511,0.257640540045629,0.558350568994769,0.168776332241266,0.292311015483596,0.252433774244115,2.30124746605748,0.80823028409406,0.355009592516614,0.302256294682921,0.339121184620975,22.6115198201057,17.4557517178134,24.9519997988433,0.487894824518382,2.38553582978673,1.39432731443422,2.48786532036889,1.26160425437814,4.01475094983413,3.12899064659632,2.57296375277154,1.38134921352481,0,0.721879481669586,0.236613600079688,0.337169380156203,0,0,0.217879444092406,0,0,0,0.38474715694639,1.4763109092493,0,0.8231480226628,0,0,0.982827216677626,1.18157981336281,16.3341346783421,2.09080345523293,17.8430522710467,27.1083204959305,3.37205259772859,6.03173834469785,10.4624943029138,1.3032332212413,1.03993478527958,10.1031939417691,14.8390918368098,6.10525210026273,0.721832238805369,0.925971025153221,0.380508304469197,0,0,1.72351904261178,0,0.297262324577456,29.0574885359009,16.9661949480848,15.3117105021777,6.08997954379368,7.84711633987697,20.3192819957562,0,7.57216532513744,93.2976519933474,85.7513722830921,58.7027315432667,3.80987365753014,9.93169906451522,5.86087236050235,0,1.02827492703324,1.8020583470635,2.28661146104463,2.24262168690721,0.87192013766656,2.2001485746285,3.23179289394444,0,0,4.78688609852767,6.24044621468197,0.514414748524284,1.41849132023278,0,0.857867961948885,0,0,0,0.355391948742546,0,3.31583314765545,16.5591357134056,0.99972991182057,7.29742683847143,13.0586843772353,8.43335757932127,10.0642439306465,3.44585807502342,7.13184525203592,0.723906533337896,0.821905290201534,1.79060963239896,20.9599219267896,143.635424187205,133.689096412901,112.04347067222,4.8277978602268,9.10978977003352,7.73288812777695,5.36052049069916,5.74144876487847,22.4702107184155,11.966458368161,7.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|short_description=p2@ARL4C | |||
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Revision as of 09:20, 21 January 2014
Short description: | p2@ARL4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARL4C_5end |
Coexpression cluster: | C4201_immature_CD4_CD8_Natural_Mast_Basophils_Dendritic |
Association with transcript: | 0bp_to_ENST00000339728, uc002vvm.3_5end |
EntrezGene: | ARL4C |
HGNC: | 698 |
UniProt: | P56559 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.49e-21 | 136 |
nongranular leukocyte | 5.81e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 7.64e-13 | 120 |
mature alpha-beta T cell | 1.25e-12 | 18 |
alpha-beta T cell | 1.25e-12 | 18 |
immature T cell | 1.25e-12 | 18 |
mature T cell | 1.25e-12 | 18 |
immature alpha-beta T cell | 1.25e-12 | 18 |
T cell | 1.76e-12 | 25 |
pro-T cell | 1.76e-12 | 25 |
lymphoid lineage restricted progenitor cell | 1.46e-09 | 52 |
lymphocyte | 2.00e-09 | 53 |
common lymphoid progenitor | 2.00e-09 | 53 |
hematopoietic stem cell | 4.72e-09 | 168 |
hematopoietic cell | 1.80e-08 | 177 |
CD8-positive, alpha-beta T cell | 3.56e-08 | 11 |
hematopoietic oligopotent progenitor cell | 2.64e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.64e-07 | 161 |
myeloid leukocyte | 3.10e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.42e-09 | 98 |
blood island | 2.42e-09 | 98 |
hemolymphoid system | 1.72e-07 | 108 |