FFCP PHASE1:Hg19::chr2:231280908..231280945,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6672 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11206 | |||
|TSSclassifier=strong | |||
|UniProt=F8WFE2,C9JBL0 | |||
|association_with_transcript=0bp_to_ENST00000427101,ENST00000432979_5end | |||
|coexpression_cluster_id=C2578 | |||
|description=CAGE_peak_1_at_SP100_5end | |||
|id=chr2:231280908..231280945,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.75e-40!140;CL:0002087!1.89e-34!119;CL:0002031!4.41e-34!124;CL:0000037!1.19e-30!172;CL:0000566!1.19e-30!172;CL:0002032!1.52e-28!165;CL:0000837!1.52e-28!165;CL:0000988!3.18e-26!182;CL:0000766!3.78e-26!76;CL:0002057!1.72e-24!42;CL:0000839!3.84e-22!70;CL:0000557!2.54e-21!71;CL:0000134!3.49e-21!358;CL:0002320!3.86e-21!365;CL:0000860!4.90e-21!45;CL:0002194!1.61e-20!63;CL:0000576!1.61e-20!63;CL:0000040!1.61e-20!63;CL:0000559!1.61e-20!63;CL:0000048!6.50e-20!430;CL:0002009!9.26e-20!65;CL:0000723!6.77e-19!436;CL:0000034!1.65e-17!444;CL:0000763!7.20e-16!112;CL:0000049!7.20e-16!112;CL:0000219!3.20e-13!390;CL:0000838!2.29e-12!52;CL:0000542!2.45e-12!53;CL:0000051!2.45e-12!53;CL:0000791!1.12e-08!18;CL:0000789!1.12e-08!18;CL:0002420!1.12e-08!18;CL:0002419!1.12e-08!18;CL:0000790!1.12e-08!18;CL:0000945!9.04e-07!24;CL:0000826!9.04e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.76e-19;33!CL:0002057;3.76e-19;33!CL:0000473;9.22e-16;39!CL:0000234;9.22e-16;39!CL:0000576;2.76e-15;48!CL:0000766;9.76e-13;69!CL:0002087;7.71e-12;104!CL:0000738;3.84e-09;136!CL:0000791;1.12e-08;18!CL:0000789;1.12e-08;18!CL:0002419;1.12e-08;18!CL:0000542;1.25e-07;53!CL:0000945;8.48e-07;24!CL:0000219;9.52e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.98e-42,136;CL:0002087,1.49e-36,115;CL:0002031,4.24e-36,120;CL:0000037,4.29e-32,168;CL:0002032,5.83e-30,161;CL:0000837,5.83e-30,161;CL:0000766,1.36e-28,72;CL:0000988,5.27e-28,177;CL:0000860,1.71e-24,42;CL:0002057,1.71e-24,42;CL:0000839,1.97e-24,66;CL:0000473,4.87e-24,48;CL:0000234,4.87e-24,48;CL:0000557,1.61e-23,67;CL:0002194,7.17e-23,59;CL:0000576,7.17e-23,59;CL:0000040,7.17e-23,59;CL:0000559,7.17e-23,59;CL:0000134,1.81e-22,354;CL:0002320,2.06e-22,361;CL:0002009,5.55e-22,61;CL:0000048,2.61e-21,427;CL:0000723,2.87e-20,433;CL:0000034,9.14e-19,441;CL:0000763,4.25e-17,108;CL:0000049,4.25e-17,108;CL:0000219,3.44e-14,386;CL:0000838,2.28e-12,52;CL:0000542,2.44e-12,53;CL:0000051,2.44e-12,53;CL:0000791,1.12e-08,18;CL:0000789,1.12e-08,18;CL:0002420,1.12e-08,18;CL:0002419,1.12e-08,18;CL:0000790,1.12e-08,18;CL:0000945,9.03e-07,24;CL:0000826,9.03e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;7.44e-18;42!CL:0000790;1.12e-08;18!CL:0000051;1.25e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.07e-25!112;UBERON:0002390!5.74e-25!102;UBERON:0003061!5.74e-25!102;UBERON:0002384!2.44e-20!375;UBERON:0002371!4.48e-19!80;UBERON:0001474!3.34e-16!86;UBERON:0002405!1.01e-15!115;UBERON:0004765!1.49e-15!101;UBERON:0001434!1.49e-15!101;UBERON:0003081!2.88e-14!216;UBERON:0002204!6.03e-12!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.83e-27,108;UBERON:0002390,7.93e-27,98;UBERON:0003061,7.93e-27,98;UBERON:0002405,2.95e-23,93;UBERON:0002384,1.43e-21,371;UBERON:0002371,6.63e-21,76;UBERON:0004765,2.35e-18,90;UBERON:0001474,1.06e-17,82;UBERON:0003081,2.33e-17,203;UBERON:0001434,3.70e-17,100;UBERON:0002204,3.41e-13,167;UBERON:0000926,1.88e-11,315;UBERON:0004120,1.88e-11,315;UBERON:0006603,1.88e-11,315 | |||
|phase1_expression=41.9677056114986,30.8304754403016,41.8634580165034,28.0205235388765,33.5220820820466,29.6595098194125,17.7309914717817,27.7956744307806,21.9395927687864,7.86348596804828,4.88460817580699,14.1986891884612,11.078213085595,48.2688776544182,38.1106982087103,46.3904351051725,42.7913114897024,54.773256779053,49.2812126778412,6.40229501999297,6.73202281106035,5.01527554364941,8.87331560106276,8.75996320466459,8.28581421325698,86.6528021181767,79.1449682297477,84.5353791308915,71.9856626633494,152.380271044593,91.4963288798009,11.9524759182261,9.33738348212575,8.13458822366933,37.0293218773842,15.2121078761541,47.8568716115801,126.310953145268,104.283112684474,118.921957152287,88.67052779901,79.677841840669,93.7575066188439,150.19638065929,129.98932462895,145.793020773878,139.224993106505,128.695548950831,126.979612066992,255.183151989747,263.077045605386,276.211244509868,121.695225300026,106.504972791331,78.5473622247182,147.393751861859,142.184104180138,160.902014862681,201.097117287683,168.487739214949,160.473618575559,243.430259537797,248.13279008131,242.521883053103,249.870154459211,179.861116227091,222.34754289142,262.052357862783,195.034611489155,285.603330787228,228.841011995413,209.549974876924,287.980772571205,76.4744136449229,89.2938059853183,81.976530393775,89.6382476549031,90.1061357049038,112.82936186135,61.8477653918509,87.1255046132015,92.9760542661987,165.436469793643,187.325543662911,178.791360026575,163.010945020406,202.199973453186,186.219790545253,158.650769468367,168.867514552759,196.37847434276,147.396534532106,165.906581006349,52.8685314316103,94.7259471438796,41.6146853944622,125.500833332626,89.9994646695587,90.053456561785,120.039903690507,93.865612790474,112.207129959132,103.258166056193,97.7069706882972,117.253151174985,123.172845388493,143.255243931693,90.9448370052294,95.7236798040704,95.5384225747358,74.6145048021791,99.6922614928581,114.328940197949,117.985505187563,108.716944757176,92.9136610120043,85.4581700732284,110.304409999924,135.871574614473,105.126586726952,102.871185709314,81.7388758225602,82.6657403736973,87.6708286407766,102.443195772924,107.970426932072,110.852279584341,116.125484097446,105.906317530269,105.142517218912,70.7039912310489,23.4745300896273,33.755716326692,21.3249099906894,22.0588680679791,32.1559272093029,42.9454411407594,37.9575198836056,29.7784674066814,26.6075276955077,24.1545660656097,23.5762335895883,8.74308691902101,5.93255108455087,42.5157085687635,47.5374182827,41.7487996029237,74.8860560318774,131.558829479429,84.6923103031408,42.1376303617415,30.1082108287144,23.6055541093164,38.4409400508327,18.4579751932359,37.9662897877293,29.0503003486167,61.2447719231309,70.0859537492819,53.2205774295826,24.572588343658,31.9314284401775,29.5315089633285,18.3831540172934,31.5955359673886,55.2765318078454,54.1115788029069,58.3327468903609,21.4643292452237,16.1375162126582,27.1138581017003,241.158163907996,263.690579620861,6.97750483428055,47.2123354110553,72.1793916488105,100.233749875607,39.5834536633363,52.1362521831585,23.5484592059769,24.5522690178321,34.5334567784024,47.3040773807645,43.9156790947183,33.1827663320321,16.0438873303627,32.2658517708799,10.5444644325208,50.5699324465119,25.6712319695002,56.1927038874772,29.94579715416,19.9103721572802,25.2811452064047,66.7584140003501,37.587301097401,66.1284999524899,61.7761485786668,43.0244456944689,7.28129089550421,12.2165084108761,39.3906506652515,33.6568818455584,55.4128230968366,36.4351425331095,38.9239500664755,50.4799877926165,49.5698640409292,30.3168484314177,39.508116931435,42.1744483307528,24.607469878921,36.3775428211689,39.6766431670269,48.7626163588765,45.4008333729006,29.8157235793268,32.3115231032467,43.9078016523768,48.0088788751871,34.7909400666282,24.3820077710889,26.4514524004361,40.7780400174556,42.821140932761,36.1373790190145,0.365921118388786,0.132529768321485,0.116193942869518,0.518305275076852,0.252320850875628,0,40.6768784057521,50.1727931790451,20.7202382028721,47.8298965872938,42.5908894185055,15.8531112053391,19.7244087391379,18.7988603309116,19.3014452281689,17.2124760833001,16.6089433377768,19.685370991384,17.8561533264065,15.0051391209092,14.763109092493,9.81692416624121,9.8777762719536,7.3504355692771,36.7589600983309,49.1413608338813,44.3092430011053,20.7487656724886,13.2827513626563,37.9164860759741,28.2058233500168,7.86812272803337,49.2591964816991,43.9795114503016,25.4130478142053,9.35941306751621,18.7630744632855,15.1868830517351,39.0970951805286,66.552932417855,45.3725802325079,70.7745446312706,5.53143078571493,6.86788929675898,81.2516120088411,45.8648359672906,49.791439366724,33.7441802352397,59.6336555105951,57.4189143831665,38.4206062395219,36.3292423142452,26.0700221832344,73.4068224464956,62.7785334514302,58.8811848135793,61.8274600158765,52.5168523053741,32.7014155604671,24.4472592357298,17.582617081507,11.9750712215894,17.0693637887517,37.5428822304897,56.0219807955933,12.3344192779897,10.0270815831654,44.2963246358538,48.86470855644,28.6125156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| |||
|short_description=p1@SP100 | |||
}} |
Revision as of 09:06, 21 January 2014
Short description: | p1@SP100 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SP100_5end |
Coexpression cluster: | C2578_Eosinophils_CD14_CD19_Neutrophils_CD4_Whole_CD14CD16 |
Association with transcript: | 0bp_to_ENST00000427101, ENST00000432979_5end |
EntrezGene: | SP100 |
HGNC: | 11206 |
UniProt: | F8WFE2C9JBL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.83e-27 | 108 |
hematopoietic system | 7.93e-27 | 98 |
blood island | 7.93e-27 | 98 |
immune system | 2.95e-23 | 93 |
connective tissue | 1.43e-21 | 371 |
bone marrow | 6.63e-21 | 76 |
skeletal element | 2.35e-18 | 90 |
bone element | 1.06e-17 | 82 |
lateral plate mesoderm | 2.33e-17 | 203 |
skeletal system | 3.70e-17 | 100 |
musculoskeletal system | 3.41e-13 | 167 |
mesoderm | 1.88e-11 | 315 |
mesoderm-derived structure | 1.88e-11 | 315 |
presumptive mesoderm | 1.88e-11 | 315 |