FFCP PHASE1:Hg19::chr2:224856537..224856545,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C354 | |||
|description=CAGE_peak_at_chr2:224856537..224856545,- | |||
|id=chr2:224856537..224856545,- | |||
|ontology_enrichment_celltype=CL:0000057!2.93e-20!75;CL:0002620!7.38e-15!23;CL:0000055!6.71e-13!180;CL:1000306!7.23e-07!4;CL:0002547!7.23e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.04e-19;3!CL:0000388;1.04e-19;3!CL:0002541;1.97e-09;3!CL:0000214;4.22e-09;3!CL:0002581;7.26e-08;1!CL:0000499;1.66e-07;28!CL:0002616;2.91e-07;1!CL:1000306;3.68e-07;4!CL:0002547;3.68e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.08e-19,3;CL:0000388,1.08e-19,3;CL:0000057,5.67e-13,76;CL:0002541,2.33e-09,3;CL:0000214,3.98e-09,3;CL:0002581,7.03e-08,1;CL:0000499,1.62e-07,28;CL:0002616,1.95e-07,1;CL:1000306,2.92e-07,4;CL:0002547,2.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.91e-07;1 | |||
|ontology_enrichment_disease=DOID:17!3.73e-08!5;DOID:450!3.73e-08!5;DOID:66!3.73e-08!5;DOID:423!3.73e-08!5;DOID:0080000!3.73e-08!5;DOID:11722!3.73e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.22e-09;3!DOID:127;4.22e-09;3!DOID:3369;2.91e-07;1!DOID:0060072;4.99e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.82e-09,3;DOID:127,3.82e-09,3;DOID:3369,1.72e-07,1;DOID:0060072,4.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002097!5.59e-12!40;UBERON:0002199!4.15e-11!45;UBERON:0002416!4.15e-11!45;UBERON:0003102!2.81e-08!95;UBERON:0000415!7.23e-07!4;UBERON:0007240!7.23e-07!4;UBERON:0005742!7.23e-07!4;UBERON:0005734!7.23e-07!4;UBERON:0004664!7.23e-07!4;UBERON:0004663!7.23e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.04e-19;3!UBERON:0000043;1.04e-19;3!UBERON:0007845;1.04e-19;3!UBERON:0005406;1.93e-13;2!UBERON:0003124;1.97e-09;3!UBERON:0000920;1.97e-09;3!UBERON:0006915;4.22e-09;3!UBERON:0007616;4.22e-09;3!UBERON:0002217;4.22e-09;3!UBERON:0002018;4.22e-09;3!UBERON:0004905;2.40e-07;8!UBERON:0000982;2.40e-07;8!UBERON:0004770;2.40e-07;8!UBERON:0002079;2.91e-07;1!UBERON:0004797;3.68e-07;4!UBERON:0000415;3.68e-07;4!UBERON:0007240;3.68e-07;4!UBERON:0005742;3.68e-07;4!UBERON:0005734;3.68e-07;4!UBERON:0004664;3.68e-07;4!UBERON:0004663;3.68e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.08e-19,3;UBERON:0000043,1.08e-19,3;UBERON:0007845,1.08e-19,3;UBERON:0005406,1.25e-13,2;UBERON:0000920,2.33e-09,3;UBERON:0006915,3.98e-09,3;UBERON:0007616,3.98e-09,3;UBERON:0002217,3.98e-09,3;UBERON:0002018,3.98e-09,3;UBERON:0002079,2.35e-07,1;UBERON:0004905,2.75e-07,8;UBERON:0000982,2.75e-07,8;UBERON:0004770,2.75e-07,8;UBERON:0000415,2.92e-07,4;UBERON:0007240,2.92e-07,4;UBERON:0005742,2.92e-07,4;UBERON:0005734,2.92e-07,4;UBERON:0004664,2.92e-07,4;UBERON:0004663,2.92e-07,4 | |||
|phase1_expression=0.363356758541113,1.2846031433459,0.422863212287913,0,0.893922188854576,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53007406669196,0,0.289693037921647,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.506522046658319,0.397227542439656,7.74458876021797,1.77334191099179,0,0,0,0,0,0,0,0,0,0,0,0.747243402759005,0.117434498643765,0.323745888736263,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0.30648779579902,0.300476117813194,0.113432183160021,0.717558542755448,0.640672166455702,0.423863802319124,2.40072876867522,1.23663035086127,1.28820270022815,0.930584281657949,0.337552664482532,0.584622030967192,0.504867548488229,0.0920498986422993,0.484938170456436,4.26011511019937,1.61203357164224,0,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.719792448923265,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,1.08506009479894,0.207970861530807,0.535286966391485,0.315404830067869,0.234282829985426,0.300946099727719,4.5481500811197,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,1.24053903909388,0,0.561320188866147,1.28139149255701,0.511707249066704,0.804269605718038,5.93672265779964,0,0.532685175939381,0,0,0,0,0.40101294060657,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0.384380134730212,0,0,0,2.83331112147576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09814811894422,0.117812402345686,0,0,0,0,1.21856744815642,0,0,0.282810863907425,0,0.551365343546124,0,1.31535265576129,0,0,0,0,0,0,0,0,0,2.32218398827431,1.31717957183961,0,0,0.192444225451024,0,1.08890984861323,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,0,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,2.23300811812344,0.549585560411174,3.19820865611181,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,1.42939065274673,0,0,1.62899880526114,0,2.28611152076586,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0.124980407962107,0.606596470166591,0.285465333544967,0,0,0,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0.457680136793847,0.151230923763239,0.621748802331122,0.443565449968902,0.477890301491107,0,0,2.90294345488599,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,5.57992527250127,2.31087814315709,2.59575937274273,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p@chr2:224856537..224856545,- | |||
}} |
Revision as of 08:55, 21 January 2014
Short description: | p@chr2:224856537..224856545, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:224856537..224856545, - |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.08e-19 | 3 |
tendon cell | 1.08e-19 | 3 |
fibroblast | 5.67e-13 | 76 |
chorionic membrane mesenchymal stem cell | 2.33e-09 | 3 |
synovial cell | 3.98e-09 | 3 |
perirenal preadipocyte | 7.03e-08 | 1 |
stromal cell | 1.62e-07 | 28 |
perirenal adipocyte cell | 1.95e-07 | 1 |
fibroblast of tunica adventitia of artery | 2.92e-07 | 4 |
fibroblast of the aortic adventitia | 2.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.08e-19 | 3 |
tendon | 1.08e-19 | 3 |
regular connective tissue | 1.08e-19 | 3 |
perirenal fat | 1.25e-13 | 2 |
egg chorion | 2.33e-09 | 3 |
stratified squamous epithelium | 3.98e-09 | 3 |
layer of synovial tissue | 3.98e-09 | 3 |
synovial joint | 3.98e-09 | 3 |
synovial membrane of synovial joint | 3.98e-09 | 3 |
left cardiac atrium | 2.35e-07 | 1 |
articulation | 2.75e-07 | 8 |
skeletal joint | 2.75e-07 | 8 |
articular system | 2.75e-07 | 8 |
artery wall | 2.92e-07 | 4 |
tunica adventitia of artery | 2.92e-07 | 4 |
adventitia | 2.92e-07 | 4 |
tunica adventitia of blood vessel | 2.92e-07 | 4 |
aorta tunica adventitia | 2.92e-07 | 4 |
aorta wall | 2.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.82e-09 | 3 |
leiomyoma | 3.82e-09 | 3 |
peripheral primitive neuroectodermal tumor | 1.72e-07 | 1 |
benign neoplasm | 4.63e-07 | 4 |