FFCP PHASE1:Hg19::chr2:218766698..218766769,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7145 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11973 | |||
|TSSclassifier=strong | |||
|UniProt=C9JFT7 | |||
|association_with_transcript=0bp_to_ENST00000439083_5end | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_5_at_TNS1_5end | |||
|id=chr2:218766698..218766769,- | |||
|ontology_enrichment_celltype=CL:0002057!7.74e-16!42;CL:0002194!7.97e-14!63;CL:0000576!7.97e-14!63;CL:0000040!7.97e-14!63;CL:0000559!7.97e-14!63;CL:0000860!1.26e-13!45;CL:0000839!2.63e-13!70;CL:0000766!4.30e-13!76;CL:0000048!7.88e-13!430;CL:0000557!7.99e-13!71;CL:0002009!8.74e-13!65;CL:0000723!9.33e-12!436;CL:0000034!2.56e-11!444;CL:0000680!5.88e-08!57;CL:0000056!5.88e-08!57;CL:0000355!5.88e-08!57;CL:0000134!1.50e-07!358;CL:0002320!4.84e-07!365;CL:0000187!7.13e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-27;33!CL:0002057;1.32e-27;33!CL:0000473;8.86e-26;39!CL:0000234;8.86e-26;39!CL:0000576;3.04e-13;48!CL:0000766;5.73e-10;69!CL:0000136;5.82e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.87e-29,48;CL:0000234,2.87e-29,48;CL:0000860,1.63e-25,42;CL:0002057,1.63e-25,42;CL:0002194,2.65e-20,59;CL:0000576,2.65e-20,59;CL:0000040,2.65e-20,59;CL:0000559,2.65e-20,59;CL:0002009,3.62e-19,61;CL:0000766,5.53e-19,72;CL:0000839,1.18e-18,66;CL:0000557,3.71e-18,67;CL:0000048,2.38e-12,427;CL:0000723,1.17e-11,433;CL:0000034,4.14e-11,441;CL:0000134,6.80e-09,354;CL:0000763,2.05e-08,108;CL:0000049,2.05e-08,108;CL:0002320,3.50e-08,361;CL:0000136,4.95e-08,15 | |||
|ontology_enrichment_development_v019=CL:0002057;2.42e-19;42 | |||
|ontology_enrichment_disease=DOID:2394!1.88e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.63e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.99e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0003081!2.28e-14!216;UBERON:0002204!6.58e-12!167;UBERON:0000926!7.27e-11!448;UBERON:0004120!7.27e-11!448;UBERON:0006603!7.27e-11!448;UBERON:0002405!2.12e-10!115;UBERON:0002371!4.42e-10!80;UBERON:0004872!1.14e-09!84;UBERON:0007100!3.97e-09!27;UBERON:0001474!2.08e-08!86;UBERON:0003914!3.64e-08!118;UBERON:0002385!4.02e-08!63;UBERON:0001015!4.02e-08!63;UBERON:0000383!4.02e-08!63;UBERON:0001637!5.52e-08!42;UBERON:0003509!5.52e-08!42;UBERON:0004572!5.52e-08!42;UBERON:0001134!1.08e-07!61;UBERON:0002036!1.08e-07!61;UBERON:0003082!1.08e-07!61;UBERON:0000948!1.44e-07!24;UBERON:0005498!1.44e-07!24;UBERON:0004140!1.44e-07!24;UBERON:0009881!1.44e-07!24;UBERON:0004141!1.44e-07!24;UBERON:0003084!1.44e-07!24;UBERON:0007005!1.44e-07!24;UBERON:0004139!1.44e-07!24;UBERON:0004291!1.44e-07!24;UBERON:0007023!1.44e-07!115;UBERON:0000468!2.13e-07!659;UBERON:0000480!2.37e-07!626;UBERON:0004573!3.38e-07!33;UBERON:0004571!3.38e-07!33;UBERON:0000467!3.57e-07!625;UBERON:0002390!6.65e-07!102;UBERON:0003061!6.65e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.16e-09;25!UBERON:0000948;2.63e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.44e-21,315;UBERON:0004120,2.44e-21,315;UBERON:0006603,2.44e-21,315;UBERON:0003081,2.32e-17,203;UBERON:0002371,2.55e-14,76;UBERON:0001474,2.81e-12,82;UBERON:0002204,1.75e-11,167;UBERON:0004765,4.89e-10,90;UBERON:0002405,6.92e-10,93;UBERON:0007100,2.62e-09,27;UBERON:0002390,3.08e-09,98;UBERON:0003061,3.08e-09,98;UBERON:0003914,3.46e-08,117;UBERON:0002384,4.79e-08,371;UBERON:0001434,7.90e-08,100;UBERON:0004872,1.61e-07,83;UBERON:0002193,2.90e-07,108;UBERON:0000948,2.93e-07,24;UBERON:0005498,2.93e-07,24;UBERON:0004140,2.93e-07,24;UBERON:0009881,2.93e-07,24;UBERON:0004141,2.93e-07,24;UBERON:0003084,2.93e-07,24;UBERON:0007005,2.93e-07,24;UBERON:0004139,2.93e-07,24;UBERON:0004291,2.93e-07,24;UBERON:0001637,3.25e-07,42;UBERON:0003509,3.25e-07,42;UBERON:0004572,3.25e-07,42 | |||
|phase1_expression=9.26559734279839,2.14100523890983,17.6193005119964,4.00293193412522,2.68176656656373,14.8297549097063,0,3.79031924056099,0.522371256399677,14.2525683170875,16.0494268633658,0,0,0,0,0,0.602694528023977,0.730310090387373,2.92759679274304,0.123121058076788,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,2.75354993794233,3.45446458287491,7.27635779585557,0,0,0,0,0,0,8.86392653651004,5.01361118675354,1.51907609501096,0.223915474239924,0.647787332037959,0.257575567634187,100.760979474238,129.233572741573,105.766650677888,72.7502885514793,108.13715454974,55.7471467611186,8.91846416198666,18.4435708700952,13.7159693335379,17.5820297175675,27.1103567105207,31.1480919166986,119.157400930469,179.572246738063,97.9794392180569,59.3802751199551,102.376359637274,56.9010041961147,18.1418215102694,32.1136488770827,28.5570582856905,51.0768259986308,90.2142507258912,81.5897146184203,12.3111845975804,16.1659704710262,13.9000860611275,18.7673845816344,56.714755942085,36.3931745557017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.15076305659177,0,0.50133791063589,0.144846518960824,0.795285947051099,0.973269740605272,0,0,0.087834785693126,11.9190958702918,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0.79504962946682,2.58070378531837,0.347140501607594,0,0.419499436209906,0,0.417989933073621,0,0,0.66944122552934,0,0,0.24406205754817,0,0,0.267899184852239,0,0,0,0.949265659568129,0,0,0,0,13.9152146474689,3.16576279161449,0.529636723252875,1.14734648299525,0,5.60677600142307,12.8098794875646,4.68668341992604,0.622422070799533,0.404132016209064,1.79808093424805,0.151357427644931,1.72852777344,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,1.70148274740032,0.89694817844431,0.213557388818567,3.39091041855299,0.300091096084402,0.103052529238439,0.772921620136887,0.558350568994769,3.54430297706659,2.14361411354637,0.252433774244115,0.644349290496095,0.323292113637624,0.355009592516614,0.503760491138201,2.03472710772585,0,0,0,0,0,0,0.310983165046111,0.504641701751257,0,1.56449532329816,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,5.60967095213783,1.6462960453256,0,0,2.94848165003288,1.18157981336281,0,1.8448265781467,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0.577465791044295,0,0.380508304469197,0,0,4.92434012174795,1.8720341211139,7.28292695214768,0,0,0,0,0,0,0,0.528290604079356,5.80518723514162,1.44119953416961,0.75745460055828,0.063497894292169,3.4378958300245,0,0,0,0,0,0.112131084345361,0,0.07333828582095,7.88557466122444,0,0.845302752556,18.3497300443561,11.4408180602503,0,0,0,1.42977993658148,0,0,0.325736184293735,0.355391948742546,0,0.602878754119172,1.74306691720059,0.499864955910285,2.43247561282381,1.50677127429638,4.21667878966063,0.958499421966331,3.44585807502342,7.13184525203592,2.89562613335158,3.49309748335652,10.0274139414342,0.896681151948218,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,0.178428988797162,0.157702415033935,0.234282829985426,0.902838299183157,0,0,1.99267679560631,0.921845842708516,0,0.587403472388222,0.343143423810856,0.206768026122887,1.2942852049117,0.426910231213777,0,0,0,15.6307918925829,10.7423381301644,5.89386198309454,10.2511319404561,8.69902323413396,16.8896617200788,7.42090332224955,1.85051632563187,4.79416658345443,0.328508624055237,0,0.697262270759755,2.1754700926492,0,0,0.803701137152247,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,9.58281408323817,0,0,0,0,6.42735719376638,0.48335359146061,0.308097234229289,0.460511024178389,0.413509717453592,0.107420244868274,0.290033387828457,0.426133137080504,0.712256285173899,0.330569830721956,0.192190067365106,2.04180339991335,0.50578890427775,1.85938219718914,2.83331112147576,2.0911118104818,0.924100740528266,6.91997839412128,1.73986598415015,6.67167188774112,2.00374841438788,0,0,0.190630193923825,0.511795582622668,0,0,9.41938368239076,0.179872457583315,0.54907405947211,0.117812402345686,7.07638685506606,4.75530963519025,4.21258456238981,0,0.974853958525138,5.28250733783777,1.09199929126389,0.565621727814851,0,7.16774946609961,3.98063385144732,4.38450885253763,0,0,2.84074527747786,3.0982349809975,1.69017361519345,0,0,2.49669736036875,1.41904425628239,0.211107635297664,0,0,0,0,0,0,11.5796874955438,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05836791361941,0,0,0.456469358066384,0,0,0,0,0,0,0.687010689511529,0.307240764308458,0.223676107892416,0,0,0,0,0,0.33307196799782,0,0,8.05794985995417,0,0,0,0.23874448473769,0,0,0.994147647766298,0,0,0,0,53.5977088395378,0.828851746593443,0,0.102268682502155,2.09244169283818,3.73247505194169,0,0,0.511572370226872,10.9494180256996,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.221158519862449,0,0.438770794307945,0,0,4.46311499322023,0.227884111694002,0,0,0,5.42301971544263,7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| |||
|short_description=p5@TNS1 | |||
}} |
Revision as of 08:35, 21 January 2014
Short description: | p5@TNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TNS1_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 0bp_to_ENST00000439083_5end |
EntrezGene: | TNS1 |
HGNC: | 11973 |
UniProt: | C9JFT7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.87e-29 | 48 |
phagocyte | 2.87e-29 | 48 |
classical monocyte | 1.63e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.63e-25 | 42 |
monopoietic cell | 2.65e-20 | 59 |
monocyte | 2.65e-20 | 59 |
monoblast | 2.65e-20 | 59 |
promonocyte | 2.65e-20 | 59 |
macrophage dendritic cell progenitor | 3.62e-19 | 61 |
myeloid leukocyte | 5.53e-19 | 72 |
myeloid lineage restricted progenitor cell | 1.18e-18 | 66 |
granulocyte monocyte progenitor cell | 3.71e-18 | 67 |
multi fate stem cell | 2.38e-12 | 427 |
somatic stem cell | 1.17e-11 | 433 |
stem cell | 4.14e-11 | 441 |
mesenchymal cell | 6.80e-09 | 354 |
myeloid cell | 2.05e-08 | 108 |
common myeloid progenitor | 2.05e-08 | 108 |
connective tissue cell | 3.50e-08 | 361 |
fat cell | 4.95e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.44e-21 | 315 |
mesoderm-derived structure | 2.44e-21 | 315 |
presumptive mesoderm | 2.44e-21 | 315 |
lateral plate mesoderm | 2.32e-17 | 203 |
bone marrow | 2.55e-14 | 76 |
bone element | 2.81e-12 | 82 |
musculoskeletal system | 1.75e-11 | 167 |
skeletal element | 4.89e-10 | 90 |
immune system | 6.92e-10 | 93 |
primary circulatory organ | 2.62e-09 | 27 |
hematopoietic system | 3.08e-09 | 98 |
blood island | 3.08e-09 | 98 |
epithelial tube | 3.46e-08 | 117 |
connective tissue | 4.79e-08 | 371 |
skeletal system | 7.90e-08 | 100 |
splanchnic layer of lateral plate mesoderm | 1.61e-07 | 83 |
hemolymphoid system | 2.90e-07 | 108 |
heart | 2.93e-07 | 24 |
primitive heart tube | 2.93e-07 | 24 |
primary heart field | 2.93e-07 | 24 |
anterior lateral plate mesoderm | 2.93e-07 | 24 |
heart tube | 2.93e-07 | 24 |
heart primordium | 2.93e-07 | 24 |
cardiac mesoderm | 2.93e-07 | 24 |
cardiogenic plate | 2.93e-07 | 24 |
heart rudiment | 2.93e-07 | 24 |
artery | 3.25e-07 | 42 |
arterial blood vessel | 3.25e-07 | 42 |
arterial system | 3.25e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.99e-09 | 14 |