FFCP PHASE1:Hg19::chr2:208394658..208394692,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1385 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2345 | |||
|TSSclassifier=strong | |||
|UniProt=C9JBT4 | |||
|association_with_transcript=0bp_to_ENST00000421139_5end | |||
|description=CAGE_peak_1_at_CREB1_5end | |||
|id=chr2:208394658..208394692,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.50e-24!172;CL:0000566!1.50e-24!172;CL:0000988!1.77e-22!182;CL:0002032!2.76e-22!165;CL:0000837!2.76e-22!165;CL:0000738!1.25e-18!140;CL:0002031!1.99e-14!124;CL:0000542!3.38e-13!53;CL:0000051!3.38e-13!53;CL:0002087!4.53e-13!119;CL:0000838!5.12e-13!52;CL:0000763!3.44e-10!112;CL:0000049!3.44e-10!112;CL:0000945!1.52e-08!24;CL:0000826!1.52e-08!24;CL:0000236!1.51e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.51e-08;24!CL:0000542;2.70e-08;53!CL:0000236;7.86e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.00e-27,168;CL:0000988,3.53e-25,177;CL:0002032,1.77e-24,161;CL:0000837,1.77e-24,161;CL:0000738,8.66e-21,136;CL:0002031,2.12e-16,120;CL:0002087,5.75e-15,115;CL:0000542,3.38e-13,53;CL:0000051,3.38e-13,53;CL:0000838,5.12e-13,52;CL:0000763,7.30e-12,108;CL:0000049,7.30e-12,108;CL:0000945,1.52e-08,24;CL:0000826,1.52e-08,24;CL:0000236,1.51e-07,14;CL:0000766,3.54e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000051;2.70e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.93e-12!115;UBERON:0000178!2.63e-09!15;UBERON:0000179!2.63e-09!15;UBERON:0000463!2.63e-09!15;UBERON:0001017!6.40e-09!82;UBERON:0000073!1.32e-08!94;UBERON:0001016!1.32e-08!94;UBERON:0002390!2.31e-08!102;UBERON:0003061!2.31e-08!102;UBERON:0005743!2.76e-08!86;UBERON:0001049!9.44e-08!57;UBERON:0005068!9.44e-08!57;UBERON:0006241!9.44e-08!57;UBERON:0007135!9.44e-08!57;UBERON:0002780!4.92e-07!41;UBERON:0001890!4.92e-07!41;UBERON:0006240!4.92e-07!41;UBERON:0003080!5.29e-07!42;UBERON:0002193!6.77e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.45e-09;15!UBERON:0000179;2.45e-09;15!UBERON:0000463;2.45e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.19e-12,114;UBERON:0002390,6.46e-10,98;UBERON:0003061,6.46e-10,98;UBERON:0000178,2.63e-09,15;UBERON:0000179,2.63e-09,15;UBERON:0000463,2.63e-09,15;UBERON:0001016,3.27e-09,89;UBERON:0001017,6.36e-09,81;UBERON:0002193,3.45e-08,108;UBERON:0001049,9.08e-08,56;UBERON:0005068,9.08e-08,56;UBERON:0006241,9.08e-08,56;UBERON:0007135,9.08e-08,56;UBERON:0000073,2.55e-07,53;UBERON:0002616,2.55e-07,53;UBERON:0002780,4.92e-07,41;UBERON:0001890,4.92e-07,41;UBERON:0003080,4.92e-07,41;UBERON:0006240,4.92e-07,41 | |||
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| |||
|short_description=p1@CREB1 | |||
}} |
Revision as of 08:07, 21 January 2014
Short description: | p1@CREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CREB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000421139_5end |
EntrezGene: | CREB1 |
HGNC: | 2345 |
UniProt: | C9JBT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.00e-27 | 168 |
hematopoietic cell | 3.53e-25 | 177 |
hematopoietic oligopotent progenitor cell | 1.77e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-24 | 161 |
leukocyte | 8.66e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 2.12e-16 | 120 |
nongranular leukocyte | 5.75e-15 | 115 |
lymphocyte | 3.38e-13 | 53 |
common lymphoid progenitor | 3.38e-13 | 53 |
lymphoid lineage restricted progenitor cell | 5.12e-13 | 52 |
myeloid cell | 7.30e-12 | 108 |
common myeloid progenitor | 7.30e-12 | 108 |
lymphocyte of B lineage | 1.52e-08 | 24 |
pro-B cell | 1.52e-08 | 24 |
B cell | 1.51e-07 | 14 |
myeloid leukocyte | 3.54e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.19e-12 | 114 |
hematopoietic system | 6.46e-10 | 98 |
blood island | 6.46e-10 | 98 |
blood | 2.63e-09 | 15 |
haemolymphatic fluid | 2.63e-09 | 15 |
organism substance | 2.63e-09 | 15 |
nervous system | 3.27e-09 | 89 |
central nervous system | 6.36e-09 | 81 |
hemolymphoid system | 3.45e-08 | 108 |
neural tube | 9.08e-08 | 56 |
neural rod | 9.08e-08 | 56 |
future spinal cord | 9.08e-08 | 56 |
neural keel | 9.08e-08 | 56 |
regional part of nervous system | 2.55e-07 | 53 |
regional part of brain | 2.55e-07 | 53 |
regional part of forebrain | 4.92e-07 | 41 |
forebrain | 4.92e-07 | 41 |
anterior neural tube | 4.92e-07 | 41 |
future forebrain | 4.92e-07 | 41 |