FFCP PHASE1:Hg19::chr2:206547166..206547186,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8828 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8005 | |||
|TSSclassifier=strong | |||
|UniProt=E9PF66,O60462,F5H1G4,F5H2X3,Q7LBX6,Q7Z3T9,Q9H2E2,Q7LBX7 | |||
|association_with_transcript=-37bp_to_ENST00000355117,ENST00000360409,ENST00000540178,ENST00000540841,NM_003872,NM_018534,NM_201264,NM_201266,NM_201267,NM_201279,uc002vat.2,uc002vau.2,uc002vav.2,uc002vaw.2,uc002vax.2,uc002vay.2_5end | |||
|coexpression_cluster_id=C4174 | |||
|description=CAGE_peak_2_at_NRP2_5end | |||
|id=chr2:206547166..206547186,+ | |||
|ontology_enrichment_celltype=CL:0000115!2.05e-11!35;CL:0000557!5.53e-11!71;CL:0002078!1.68e-10!44;CL:0000220!2.02e-10!246;CL:0002009!2.40e-10!65;CL:0000222!2.71e-10!119;CL:0002194!3.40e-10!63;CL:0000576!3.40e-10!63;CL:0000040!3.40e-10!63;CL:0000559!3.40e-10!63;CL:0002321!3.42e-10!248;CL:0000839!3.52e-10!70;CL:0002057!2.25e-09!42;CL:0000213!3.21e-09!57;CL:0000215!3.21e-09!57;CL:0002139!8.67e-09!24;CL:0000860!1.15e-07!45;CL:0000766!1.69e-07!76;CL:0000055!2.66e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.85e-13;39!CL:0000234;6.85e-13;39!CL:0000860;3.45e-12;33!CL:0002057;3.45e-12;33!CL:0000115;6.13e-10;36!CL:0002139;8.96e-09;24!CL:0002078;1.29e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.82e-12,48;CL:0000234,2.82e-12,48;CL:0000557,4.71e-12,67;CL:0000115,8.70e-12,36;CL:0002009,2.23e-11,61;CL:0000839,3.03e-11,66;CL:0002194,3.08e-11,59;CL:0000576,3.08e-11,59;CL:0000040,3.08e-11,59;CL:0000559,3.08e-11,59;CL:0002078,6.34e-11,45;CL:0000222,1.15e-10,121;CL:0002321,1.81e-10,250;CL:0000213,1.93e-09,58;CL:0000215,1.93e-09,58;CL:0000860,2.40e-09,42;CL:0002057,2.40e-09,42;CL:0002139,7.85e-09,24;CL:0000766,2.13e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.52e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!7.28e-16!625;UBERON:0000480!1.24e-15!626;UBERON:0000468!2.72e-15!659;UBERON:0000922!2.58e-12!612;UBERON:0002050!2.76e-12!605;UBERON:0005423!2.76e-12!605;UBERON:0000923!4.40e-12!604;UBERON:0005291!4.40e-12!604;UBERON:0006598!4.40e-12!604;UBERON:0002532!4.40e-12!604;UBERON:0003081!2.85e-10!216;UBERON:0001474!8.06e-10!86;UBERON:0002204!1.31e-09!167;UBERON:0002371!1.76e-09!80;UBERON:0002049!1.80e-09!79;UBERON:0007798!1.80e-09!79;UBERON:0000055!3.91e-09!69;UBERON:0004765!1.33e-08!101;UBERON:0001434!1.33e-08!101;UBERON:0000062!2.63e-08!511;UBERON:0002405!4.26e-08!115;UBERON:0001981!1.04e-07!60;UBERON:0007500!1.04e-07!60;UBERON:0004537!1.04e-07!60;UBERON:0006965!1.04e-07!60;UBERON:0003914!1.56e-07!118;UBERON:0000926!1.73e-07!448;UBERON:0004120!1.73e-07!448;UBERON:0006603!1.73e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005423,2.00e-13,581;UBERON:0002050,1.97e-12,564;UBERON:0000922,2.90e-12,592;UBERON:0000923,4.98e-12,560;UBERON:0010316,4.98e-12,560;UBERON:0005291,4.98e-12,560;UBERON:0006598,4.98e-12,560;UBERON:0010317,4.98e-12,560;UBERON:0002532,4.98e-12,560;UBERON:0001474,1.09e-10,82;UBERON:0000926,2.01e-10,315;UBERON:0004120,2.01e-10,315;UBERON:0006603,2.01e-10,315;UBERON:0002371,2.18e-10,76;UBERON:0002405,6.91e-10,93;UBERON:0002204,8.88e-10,167;UBERON:0004765,2.12e-09,90;UBERON:0002049,3.78e-09,78;UBERON:0007798,3.78e-09,78;UBERON:0003081,5.40e-09,203;UBERON:0000055,8.42e-09,68;UBERON:0001434,1.22e-08,100;UBERON:0007500,2.23e-07,59;UBERON:0001981,2.23e-07,59;UBERON:0004537,2.23e-07,59;UBERON:0006965,2.23e-07,59;UBERON:0003914,2.25e-07,117;UBERON:0000487,9.56e-07,22 | |||
|phase1_expression=11.082381135504,15.8434387679328,24.526066312699,7.00513088471913,10.7270662662549,8.72338524100369,10.1319951267324,6.94891860769514,8.35794010239483,3.68600904752263,2.79120467188971,0,0.791300934685361,3.83675694176145,4.30816588446291,19.4974292471015,14.4646686725754,17.527442169297,16.1017823600867,13.0508321561395,9.79203317972414,16.9265549598167,18.3191031763876,23.2686522623903,17.7015121828672,0.0764134057479513,0.164201178899891,0,1.96682138424452,1.15148819429164,3.40595471295367,2.75826367343678,5.72291245678675,13.6808983761711,0,1.27952309238679,0,15.5118714388926,13.0353890855592,14.5397283379621,41.2004472601461,41.7822829164484,44.0454220654459,15.8484080269726,21.9168047339509,14.7976277324568,19.0591810262661,23.4365696172441,17.0338503992307,69.9092513342826,64.5524980453334,46.3505170581627,18.961012440514,22.5919639254339,17.6054432572644,11.8592673911841,20.4679612543384,11.2361742222542,16.8346140803996,30.809186599305,18.5407766481722,54.0956132306214,63.6289067813006,60.9501393261753,42.9509673170304,62.9797599407165,44.8432019276814,52.7622197039161,66.2283306393656,49.3018677480615,42.3779651843358,55.9782006701098,28.4816148696796,2.32380814943136,1.70083439972035,3.14487968262564,2.47122988522289,1.35159203557356,2.73233497385036,0,0.19891667719909,0.547992461293902,0,1.09227722252426,0,1.70692089026603,1.20118796110804,1.14950487990897,0.661044872784862,1.90810750907073,0,1.17447437874188,0.764546456250458,0,6.1655941927969,0,0,0,0,0,0,0.473447805734733,0,0.668462741311041,0,0,0,0.640456598628376,1.69077151827842,11.8395291314647,12.4357508003632,14.7799573724877,0,0,0,0.453237370790265,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5045493051169,2.68280343881454,9.07824189089065,9.39741796199872,6.01605492763067,11.0083354410226,42.1501551937083,41.363963975724,19.3796375186339,10.1995522832779,12.1212004256514,7.33482822787191,10.9288586487763,12.6066710546706,15.5782748954248,16.5423250434304,18.4811565121223,0.476981248610684,0.571994910780128,0.371457501329565,13.9133685156694,12.0432843314857,15.6213225723417,17.5245461996443,13.0044825225071,6.87795104850169,11.7037181260614,22.2238412885623,41.6246527343451,37.4887086296431,22.9612710752214,15.9657142200888,25.3824539850096,19.1184801779852,10.5318453224629,24.646725006406,22.452937262617,17.116945033465,22.9974956198825,20.8838445104988,14.839341258363,0,0,10.4662572514208,12.424298792383,8.23098325819768,10.9899620074972,13.7681577959431,6.73869926176878,4.48542080113846,14.9448594021587,4.68668341992604,3.11211035399766,8.62148301246004,6.37501422142489,6.96244167166684,6.91411109375999,12.653357319025,5.61888138294577,5.70471821544449,1.49448680551801,5.63685593490071,5.34180716414834,3.51127016755621,1.22492502752936,3.93069815397658,2.47981874821837,14.2560342873846,7.41800787835671,5.46096817162816,8.62341770179486,4.88174730466792,4.25402967564678,3.60183350129438,9.2185300384976,5.82326812018137,15.9252342440993,5.33131260852099,18.1183532045751,10.2507546632912,7.41761654058466,11.1033705551229,5.04957393268351,9.79034052173391,5.76962254627928,25.3164498361899,6.72315335612271,8.33031455005578,5.79914361446486,5.65761198865842,26.6257194387461,6.04512589365842,5.59549954624609,6.76412986071539,7.63689137654337,7.7437240755031,5.2448693635726,2.78312513475119,3.48581828608555,7.77457912615278,7.56962552626885,7.66452454059243,15.6449532329816,8.36213219650751,6.90674606762403,23.218396401599,5.77503585335668,1.30137480043828,1.85443159085912,1.92808823906786,1.32352767278873,1.52515610864684,2.13543557199987,1.8876383142423,3.33576490713088,2.30848294167834,34.6933063673585,15.426595118379,18.1092564985816,16.1709582524096,0,0,5.31710916013264,0,2.33678033231916,9.60779737671743,8.23127140564692,11.240175325762,8.44443368257699,14.7215627802062,3.9096996637239,16.6389565644733,11.5465073620219,15.1868830517351,27.1214083684748,19.489470447745,20.3713625533709,12.5567740474835,0,0.858486162094873,40.6258060044206,23.8684350442022,30.3207571069006,4.68669169933885,11.4227847175224,9.49893151523989,17.4639119270554,17.4380363108377,11.5014803749563,71.4361694949118,9.68532774145486,15.5496086655579,16.5737946429506,15.0228495777392,12.2550935983886,19.0994212779139,15.2382681373061,10.2643467613623,17.172191281455,18.9216126441668,21.7228088799239,4.14885012077835,4.3596006883328,2.3468251462704,17.1931381957844,17.8828222925941,16.060752298564,10.9034627799797,9.36066932202295,9.25946547343712,5.67396528093113,2.93064396917709,16.8714032516614,40.6966204043582,32.10637313445,9.77208552881205,22.7450847195229,16.630989331602,17.7849232465156,14.816068796205,21.5941660953243,38.919609805181,41.1850814974344,33.7334303172851,0.958499421966331,1.14861935834114,8.5582143024431,2.31650090668127,1.02738161275192,3.40215830155802,0,0.591092280605782,0,0.385029108839245,54.6303442078296,42.9461517730152,13.9191986299985,16.7516265334349,9.56908127479745,0,0,0,5.39842563564216,2.50085260529839,1.6275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| |||
|short_description=p2@NRP2 | |||
}} |
Revision as of 08:02, 21 January 2014
Short description: | p2@NRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NRP2_5end |
Coexpression cluster: | C4174_Endothelial_mesenchymal_epithelioid_Hepatic_migratory_Neural_Mast |
Association with transcript: | -37bp_to_ENST00000355117, ENST00000360409, ENST00000540178, ENST00000540841, NM_003872, NM_018534, NM_201264, NM_201266, NM_201267, NM_201279, uc002vat.2, uc002vau.2, uc002vav.2, uc002vaw.2, uc002vax.2, uc002vay.2_5end |
EntrezGene: | NRP2 |
HGNC: | 8005 |
UniProt: | E9PF66O60462F5H1G4F5H2X3Q7LBX6Q7Z3T9Q9H2E2Q7LBX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.82e-12 | 48 |
phagocyte | 2.82e-12 | 48 |
granulocyte monocyte progenitor cell | 4.71e-12 | 67 |
endothelial cell | 8.70e-12 | 36 |
macrophage dendritic cell progenitor | 2.23e-11 | 61 |
myeloid lineage restricted progenitor cell | 3.03e-11 | 66 |
monopoietic cell | 3.08e-11 | 59 |
monocyte | 3.08e-11 | 59 |
monoblast | 3.08e-11 | 59 |
promonocyte | 3.08e-11 | 59 |
meso-epithelial cell | 6.34e-11 | 45 |
mesodermal cell | 1.15e-10 | 121 |
embryonic cell | 1.81e-10 | 250 |
lining cell | 1.93e-09 | 58 |
barrier cell | 1.93e-09 | 58 |
classical monocyte | 2.40e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.40e-09 | 42 |
endothelial cell of vascular tree | 7.85e-09 | 24 |
myeloid leukocyte | 2.13e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
developing anatomical structure | 2.00e-13 | 581 |
embryonic structure | 1.97e-12 | 564 |
embryo | 2.90e-12 | 592 |
germ layer | 4.98e-12 | 560 |
germ layer / neural crest | 4.98e-12 | 560 |
embryonic tissue | 4.98e-12 | 560 |
presumptive structure | 4.98e-12 | 560 |
germ layer / neural crest derived structure | 4.98e-12 | 560 |
epiblast (generic) | 4.98e-12 | 560 |
bone element | 1.09e-10 | 82 |
mesoderm | 2.01e-10 | 315 |
mesoderm-derived structure | 2.01e-10 | 315 |
presumptive mesoderm | 2.01e-10 | 315 |
bone marrow | 2.18e-10 | 76 |
immune system | 6.91e-10 | 93 |
musculoskeletal system | 8.88e-10 | 167 |
skeletal element | 2.12e-09 | 90 |
vasculature | 3.78e-09 | 78 |
vascular system | 3.78e-09 | 78 |
lateral plate mesoderm | 5.40e-09 | 203 |
vessel | 8.42e-09 | 68 |
skeletal system | 1.22e-08 | 100 |
epithelial tube open at both ends | 2.23e-07 | 59 |
blood vessel | 2.23e-07 | 59 |
blood vasculature | 2.23e-07 | 59 |
vascular cord | 2.23e-07 | 59 |
epithelial tube | 2.25e-07 | 117 |
simple squamous epithelium | 9.56e-07 | 22 |