FFCP PHASE1:Hg19::chr2:201729366..201729392,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1195 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2068 | |||
|TSSclassifier=strong | |||
|UniProt=F8WBF5 | |||
|association_with_transcript=0bp_to_ENST00000409403,ENST00000432425,ENST00000482590,ENST00000492793_5end | |||
|coexpression_cluster_id=C723 | |||
|description=CAGE_peak_1_at_CLK1_5end | |||
|id=chr2:201729366..201729392,- | |||
|ontology_enrichment_celltype=CL:0000738!1.52e-35!140;CL:0000037!1.34e-31!172;CL:0000566!1.34e-31!172;CL:0002031!1.46e-29!124;CL:0002032!9.52e-29!165;CL:0000837!9.52e-29!165;CL:0000988!1.64e-27!182;CL:0002087!8.34e-27!119;CL:0002057!1.67e-23!42;CL:0000860!5.45e-22!45;CL:0000766!2.92e-21!76;CL:0000557!2.30e-18!71;CL:0000839!3.56e-18!70;CL:0000763!5.94e-18!112;CL:0000049!5.94e-18!112;CL:0002009!3.09e-16!65;CL:0002194!2.20e-15!63;CL:0000576!2.20e-15!63;CL:0000040!2.20e-15!63;CL:0000559!2.20e-15!63;CL:0000838!1.58e-10!52;CL:0000542!3.35e-10!53;CL:0000051!3.35e-10!53;CL:0000791!7.90e-09!18;CL:0000789!7.90e-09!18;CL:0002420!7.90e-09!18;CL:0002419!7.90e-09!18;CL:0000790!7.90e-09!18;CL:0000084!7.44e-07!25;CL:0000827!7.44e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-18;33!CL:0002057;1.14e-18;33!CL:0000576;3.15e-13;48!CL:0000473;9.33e-13;39!CL:0000234;9.33e-13;39!CL:0000766;7.71e-11;69!CL:0002087;5.50e-10;104!CL:0000791;7.93e-09;18!CL:0000789;7.93e-09;18!CL:0002419;7.93e-09;18!CL:0000738;3.17e-08;136!CL:0000084;7.78e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.49e-36,136;CL:0000037,2.56e-32,168;CL:0002031,1.56e-30,120;CL:0002032,1.95e-29,161;CL:0000837,1.95e-29,161;CL:0000988,8.09e-29,177;CL:0002087,9.96e-28,115;CL:0000860,1.67e-23,42;CL:0002057,1.67e-23,42;CL:0000766,1.94e-22,72;CL:0000473,8.06e-20,48;CL:0000234,8.06e-20,48;CL:0000557,1.85e-19,67;CL:0000839,2.84e-19,66;CL:0000763,1.27e-18,108;CL:0000049,1.27e-18,108;CL:0002009,2.70e-17,61;CL:0002194,2.03e-16,59;CL:0000576,2.03e-16,59;CL:0000040,2.03e-16,59;CL:0000559,2.03e-16,59;CL:0000838,1.58e-10,52;CL:0000542,3.35e-10,53;CL:0000051,3.35e-10,53;CL:0000791,7.90e-09,18;CL:0000789,7.90e-09,18;CL:0002420,7.90e-09,18;CL:0002419,7.90e-09,18;CL:0000790,7.90e-09,18;CL:0000084,7.44e-07,25;CL:0000827,7.44e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;3.03e-17;42!CL:0000790;7.93e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.94e-24!115;UBERON:0002390!2.49e-20!102;UBERON:0003061!2.49e-20!102;UBERON:0002193!4.13e-17!112;UBERON:0002371!6.34e-15!80;UBERON:0001474!6.86e-14!86;UBERON:0002405!1.48e-10!115;UBERON:0004765!5.26e-10!101;UBERON:0001434!5.26e-10!101;UBERON:0001049!2.86e-09!57;UBERON:0005068!2.86e-09!57;UBERON:0006241!2.86e-09!57;UBERON:0007135!2.86e-09!57;UBERON:0003080!4.31e-08!42;UBERON:0002780!1.01e-07!41;UBERON:0001890!1.01e-07!41;UBERON:0006240!1.01e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.97e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.98e-24,114;UBERON:0002390,3.66e-21,98;UBERON:0003061,3.66e-21,98;UBERON:0002193,9.48e-18,108;UBERON:0002371,1.03e-15,76;UBERON:0001474,1.43e-14,82;UBERON:0002405,8.14e-14,93;UBERON:0004765,6.91e-12,90;UBERON:0001434,4.93e-10,100;UBERON:0001049,6.53e-09,56;UBERON:0005068,6.53e-09,56;UBERON:0006241,6.53e-09,56;UBERON:0007135,6.53e-09,56;UBERON:0000073,7.54e-08,53;UBERON:0002616,7.54e-08,53;UBERON:0002780,1.01e-07,41;UBERON:0001890,1.01e-07,41;UBERON:0003080,1.01e-07,41;UBERON:0006240,1.01e-07,41 | |||
|phase1_expression=17.0777676514323,21.6241529129893,30.4461512847298,11.0080628188443,18.3254048715188,13.0850778615055,20.2639902534648,14.5295570888171,14.626395179191,4.17747692052565,5.58240934377942,6.99012390816551,4.48403862988371,21.164046356168,12.9244976533887,20.1697543935533,15.6700577286234,18.9880623500717,16.5897151588772,6.40229501999297,6.12002073732759,5.95563970808367,21.4676990348293,22.9949034122445,16.9482563452984,40.804758669406,38.7514782203744,40.6934739391722,235.625201832493,303.992883292992,123.698082529545,14.7107395916628,9.33738348212575,26.2525347218419,25.176840188598,22.4627387330126,82.7953238924269,183.372480224051,273.743170796743,245.87331652106,37.3938841980674,45.0212195766382,43.2726953625433,200.35877303824,250.909626609369,195.037585195004,285.422857320181,334.690660849766,313.11314097495,331.709328347439,347.61007875999,414.789831224579,598.133756078033,602.23720978371,529.517562583876,261.656851964221,242.886473551483,345.17527210765,434.945211059053,502.253927374087,466.7161018333,233.204869232008,264.488810006284,220.784420775936,368.565733058302,378.44594486899,345.043525943549,322.352037524402,377.032150017806,435.898011323169,245.186798566514,438.986942097177,480.073441747822,131.189532799716,109.491214481997,99.3781979709702,91.0985198598075,96.413565204247,127.294664664087,106.309753415486,109.006339105101,92.2453976511401,89.7580846752746,156.19564282097,132.53687882567,145.941736117745,126.925527890416,128.16979410985,139.480468157606,136.429686898557,314.774771917525,309.473998798485,306.583128956434,149.353601294299,246.063259148894,35.2934673598603,370.797916664575,431.132806735834,430.735140403972,87.271350593934,341.566535432003,295.431430778474,208.464599396465,82.5551485519136,293.427483844938,220.86929289987,200.936466913642,61.099559509147,66.7204452982175,69.7216715519587,58.0335037350282,59.6994356614208,216.053522527122,206.809060113348,160.984706659664,56.3147433206904,236.830265045987,228.855878691432,248.212317871132,95.569624297229,102.871185709314,124.509217822737,140.336010980484,90.7425073084826,82.4542795245483,104.418768151411,106.746639599736,355.634295048428,439.136801476519,394.356851772862,58.5136479153508,11.4019146149618,4.98663991189768,27.8308147336116,14.0374614978049,30.7074620196946,23.858578411533,34.0644409211845,23.3500998395248,20.3991045665559,14.668409210752,38.1149109698344,1.82147644146271,3.70784442784429,36.3493080893245,36.3931150955468,30.580330919339,170.043815129709,197.338244219144,184.242920659464,25.0440633282048,15.4842227119102,9.71993404501264,22.6123176769604,12.1654836500873,13.4807840550633,14.6296476575767,31.0100111003195,20.2786769731425,19.7485161531155,10.876391561947,19.0068026429628,12.2031028774085,24.2657633028273,11.3419872703446,20.181738592202,32.5567590307946,18.0178368773316,9.19899824795299,10.4419222552494,13.7401307947805,224.026709641308,302.468606035694,1.74437620857014,19.8788780678127,12.1565291197997,41.0468460520978,49.6227353895448,18.4427558743146,11.7742296029885,10.6748995729705,15.0467204534468,28.9426262921783,33.677668017422,22.7212045327708,11.8058793563046,18.43762958336,5.38939293217732,13.4228833037038,10.8389646093445,16.1404574995945,19.7289957721525,21.8528474896978,13.9046298635226,28.7857381469399,23.4613546065477,50.216329651422,33.2640800038975,27.9411630084769,1.82032272387605,5.03032699271367,17.843628079131,22.7715706166975,19.9486163148612,18.876037697876,12.2595118319608,27.4935647799072,7.82682063804145,40.9008369370605,29.6844770457809,25.4318281391474,30.9093828966934,38.4385934059377,38.6460810068444,22.5201396161224,35.7805824351484,22.8976962128817,34.3309932971996,41.6986040849616,55.4445974888525,41.1811127319273,24.7850161639995,10.3431961309397,27.0565194428616,21.2741974060851,24.3783906080653,15.8565817968474,13.120447063827,21.960655202339,20.1102446729819,14.3822884999108,16.7889585174882,20.3384392028761,17.3675053312079,12.4321429217232,18.1103491932472,22.3782639317572,20.1121560067735,21.7474250200751,20.2449265102125,22.0587945464788,21.3521855210558,24.676144387554,16.4494195955401,16.0901601402784,13.4661504931237,8.85786545549578,4.20725321410337,4.115740113314,5.88034845542168,58.3073160180422,70.7635596007891,90.9816456289362,49.0024040350262,37.3884853171065,12.1813145311953,11.8530308241316,11.240175325762,33.2750898682498,19.6287503736083,12.3807156017923,5.19967392639789,14.4331342025273,17.5054911512366,3.99189560401794,23.9648303283383,23.1492756288305,15.2203321787679,22.1257231428597,21.4621540523718,27.5763046817885,22.2304051882276,22.5919366678867,19.6841051372232,12.2626953585167,19.2814132249646,23.7330085162548,22.960081142603,10.7347150166259,176.373439166748,50.7158979916182,272.429143820574,238.950882765322,210.698621388628,12.5725830698495,11.0776643411901,4.68869788840188,3.4214489204541,24.6785982487976,15.9181820657276,24.2952467735991,6.839996145067,6.10344096366592,18.4812480268794,17.5809533430578,10.72969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| |||
|short_description=p1@CLK1 | |||
}} |
Revision as of 07:51, 21 January 2014
Short description: | p1@CLK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLK1_5end |
Coexpression cluster: | C723_CD14_CD4_Eosinophils_CD8_Natural_Neutrophils_CD19 |
Association with transcript: | 0bp_to_ENST00000409403, ENST00000432425, ENST00000482590, ENST00000492793_5end |
EntrezGene: | CLK1 |
HGNC: | 2068 |
UniProt: | F8WBF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.98e-24 | 114 |
hematopoietic system | 3.66e-21 | 98 |
blood island | 3.66e-21 | 98 |
hemolymphoid system | 9.48e-18 | 108 |
bone marrow | 1.03e-15 | 76 |
bone element | 1.43e-14 | 82 |
immune system | 8.14e-14 | 93 |
skeletal element | 6.91e-12 | 90 |
skeletal system | 4.93e-10 | 100 |
neural tube | 6.53e-09 | 56 |
neural rod | 6.53e-09 | 56 |
future spinal cord | 6.53e-09 | 56 |
neural keel | 6.53e-09 | 56 |
regional part of nervous system | 7.54e-08 | 53 |
regional part of brain | 7.54e-08 | 53 |
regional part of forebrain | 1.01e-07 | 41 |
forebrain | 1.01e-07 | 41 |
anterior neural tube | 1.01e-07 | 41 |
future forebrain | 1.01e-07 | 41 |