FFCP PHASE1:Hg19::chr2:191514009..191514047,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4664 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7626 | |||
|TSSclassifier=strong | |||
|UniProt=F8W8J7 | |||
|association_with_transcript=13bp_to_ENST00000357215_5end | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_3_at_NAB1_5end | |||
|id=chr2:191514009..191514047,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.07e-10!45;CL:0002057!1.82e-10!42;CL:0000557!5.66e-10!71;CL:0000839!1.63e-08!70;CL:0002009!2.06e-08!65;CL:0002194!3.22e-08!63;CL:0000576!3.22e-08!63;CL:0000040!3.22e-08!63;CL:0000559!3.22e-08!63;CL:0000766!2.54e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.77e-25;33!CL:0002057;1.77e-25;33!CL:0000473;7.45e-19;39!CL:0000234;7.45e-19;39!CL:0000576;2.35e-11;48!CL:0000766;4.51e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.45e-21,42;CL:0002057,3.45e-21,42;CL:0000473,1.73e-19,48;CL:0000234,1.73e-19,48;CL:0000557,1.29e-15,67;CL:0000839,1.17e-14,66;CL:0002194,3.80e-14,59;CL:0000576,3.80e-14,59;CL:0000040,3.80e-14,59;CL:0000559,3.80e-14,59;CL:0002009,1.83e-13,61;CL:0000766,7.84e-13,72;CL:0002031,2.67e-10,120;CL:0002087,2.67e-09,115;CL:0000738,9.79e-09,136;CL:0000988,4.42e-08,177;CL:0000763,1.11e-07,108;CL:0000049,1.11e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.59e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.34e-08!80;UBERON:0001474!4.00e-08!86;UBERON:0002390!2.36e-07!102;UBERON:0003061!2.36e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.17e-13,76;UBERON:0004765,1.34e-11,90;UBERON:0001474,2.17e-11,82;UBERON:0002390,4.43e-11,98;UBERON:0003061,4.43e-11,98;UBERON:0001434,1.69e-10,100;UBERON:0002193,2.53e-09,108;UBERON:0002405,3.38e-09,93 | |||
|phase1_expression=0.908391896352783,0.856402095563933,0.281908808191942,0,0,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0.37129905888014,0.662794751455832,0.672325146451775,0,0,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0.410623275218653,0.376627918784408,0.305653622991805,1.06730766284929,0.865818594450472,0,0,0.77408061658038,0,0,0,0.154934401160603,0,0.293600439334847,0.553995408531877,0.200544447470142,0.651032612147555,0,0,0.257575567634187,0.145398238779565,0,1.21292030593908,1.85943229524548,0.822335776043652,4.33588919253145,4.31538588483226,3.07392847834921,3.78371567821736,1.72372840368309,4.51839278508678,2.70852973188684,1.12945403725563,3.82068610080984,1.57306439111559,0.612167784741805,1.60464513538047,3.83602275479425,0.329851300186716,0.797854630486527,0.426224750532694,2.90209238628584,5.10646702222026,4.35975574296902,1.7587406567972,2.60741459210101,3.47502151528187,4.23779651843358,1.84138817993782,4.43047342417238,0,0,0,0.112328631146495,0.300353785683013,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,1.17447437874188,0,0,2.80254281490768,0,0.393419540227666,1.17903228824749,1.43921049299656,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.541607727530031,0,0.260118695119756,0,0,0,0.14828656316206,0,0,0,0,1.03088233644789,0.759059076058509,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,1.06976078313403,1.01377082717959,0,1.34140171940727,1.91793842765295,0,0,0.724232594804119,0,0,1.22895262313288,0.665188192387692,1.49319135678314,0.589405839739707,0.364295288292542,0,0.324547393654683,0.870648686496336,0.132957960518865,0.476981248610684,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0.709336764396714,0.560677600142307,1.06748995729705,0.24666754841716,0.933633106199299,0.538842688278752,0.326923806226917,0.302714855289863,0,0,0,0,0.448346041655403,0,0,0.421352420106746,0.204154171254893,0,0,0,0.741800787835671,0,0,0.168336113954066,0,0,0.438977620880838,0,0.45071417671979,0.226864366320042,0.358779271377724,0.427114777637135,0.211931901159562,0,0,0.257640540045629,0,0,0,0.504867548488229,0.184099797284599,0.484938170456436,0,0.10075209822764,0,0.193260853163297,0.545492241181669,0.286804595389004,0.487894824518382,0.397589304964456,0,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0.591534000199219,0.674338760312407,2.41011029883482,0.330881918197182,1.08939722046203,0.71181185733329,0.943819157121151,0.784885860501384,1.15424147083917,0,0,0,0,0,0.982827216677626,0,0.882926198829301,0.368965315629341,0.171567810298526,0.219500570817251,0,0.201057944823262,0.277765335475589,0,0,0,0.463721619900307,0.939269553886573,0,0,0.380508304469197,0.790204397959275,0,0.246217006087397,0.468008530278475,0.297262324577456,0,0.16798212819886,0,0.179117045405697,0,0.383382679165211,29.0671310358607,2.55340458638356,0.414656231081544,0.432359860250884,0.37872730027914,0.253991577168676,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.775630294546667,0,0,0.531876233169741,1.04007436911366,0,0,0,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,1.20575750823834,0.871533458600294,3.79897366491817,0,0.502257091432126,2.10833939483032,0,1.14861935834114,0,0,0,0,0.112085143993527,0.197030760201927,0.646882724578552,0.385029108839245,1.77866236955724,5.20559415430487,0.773288812777695,1.00509759200609,6.37938751653163,0,0,0.414415513436035,1.2269149171914,0,1.35632511849868,0.831883446123229,0.356857977594324,0.315404830067869,0.585707074963566,0.300946099727719,0,0,0,0.553107505625109,0.173767228936166,0,0,0,0.647142602455851,0.320182673410333,0,0,0,0.248107807818777,1.07423381301644,1.12264037773229,0.768834895534206,0.511707249066704,0.64341568457443,0,0.925258162815933,0.532685175939381,0.574890092096664,0.519254429183621,0.813472649219715,0.966875596732978,0.40101294060657,0,0.114814448164607,0.364182336013434,0.917870904715969,0,0,0,0,0.527758144464379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,3.21367859688319,0.290012154876366,0.770243085573222,0.460511024178389,0.964856007391714,0.429680979473094,1.0151168573996,0.426133137080504,0.534192213880424,0.165284915360978,0.576570202095319,0.638063562472921,0.4046311234222,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.715624433709956,0,0.632758849437452,0,0,0.855877976067841,0.318203247925937,0,0.179872457583315,0.274537029736055,0,0,0,0.842516912477962,0,0.731140468893853,1.05650146756755,0.136499911407986,0.424216295861138,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.196498082026242,0,0.354761064070598,0.633322905892992,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0.411362273086194,0,0,0,0,11.5497582631603,1.47024129588619,0.1858031751257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| |||
|short_description=p3@NAB1 | |||
}} |
Revision as of 07:35, 21 January 2014
Short description: | p3@NAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NAB1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 13bp_to_ENST00000357215_5end |
EntrezGene: | NAB1 |
HGNC: | 7626 |
UniProt: | F8W8J7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.45e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.45e-21 | 42 |
defensive cell | 1.73e-19 | 48 |
phagocyte | 1.73e-19 | 48 |
granulocyte monocyte progenitor cell | 1.29e-15 | 67 |
myeloid lineage restricted progenitor cell | 1.17e-14 | 66 |
monopoietic cell | 3.80e-14 | 59 |
monocyte | 3.80e-14 | 59 |
monoblast | 3.80e-14 | 59 |
promonocyte | 3.80e-14 | 59 |
macrophage dendritic cell progenitor | 1.83e-13 | 61 |
myeloid leukocyte | 7.84e-13 | 72 |
hematopoietic lineage restricted progenitor cell | 2.67e-10 | 120 |
nongranular leukocyte | 2.67e-09 | 115 |
leukocyte | 9.79e-09 | 136 |
hematopoietic cell | 4.42e-08 | 177 |
myeloid cell | 1.11e-07 | 108 |
common myeloid progenitor | 1.11e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.17e-13 | 76 |
skeletal element | 1.34e-11 | 90 |
bone element | 2.17e-11 | 82 |
hematopoietic system | 4.43e-11 | 98 |
blood island | 4.43e-11 | 98 |
skeletal system | 1.69e-10 | 100 |
hemolymphoid system | 2.53e-09 | 108 |
immune system | 3.38e-09 | 93 |