FFCP PHASE1:Hg19::chr2:182322985..182322998,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3676 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6140 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=17bp_to_ENST00000478440_5end | |||
|coexpression_cluster_id=C1481 | |||
|description=CAGE_peak_10_at_ITGA4_5end | |||
|id=chr2:182322985..182322998,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.75e-65!172;CL:0000566!1.75e-65!172;CL:0000988!4.06e-61!182;CL:0002032!6.32e-60!165;CL:0000837!6.32e-60!165;CL:0000738!1.02e-51!140;CL:0002031!1.78e-45!124;CL:0002087!2.59e-44!119;CL:0000763!3.95e-29!112;CL:0000049!3.95e-29!112;CL:0000542!4.57e-29!53;CL:0000051!4.57e-29!53;CL:0000838!7.63e-29!52;CL:0000134!2.81e-21!358;CL:0002320!6.72e-20!365;CL:0000766!9.60e-18!76;CL:0000839!1.61e-17!70;CL:0000557!5.50e-17!71;CL:0002057!2.69e-16!42;CL:0000219!2.84e-16!390;CL:0000084!2.90e-16!25;CL:0000827!2.90e-16!25;CL:0000791!3.59e-16!18;CL:0000789!3.59e-16!18;CL:0002420!3.59e-16!18;CL:0002419!3.59e-16!18;CL:0000790!3.59e-16!18;CL:0000034!1.31e-14!444;CL:0000860!2.32e-14!45;CL:0002194!2.79e-14!63;CL:0000576!2.79e-14!63;CL:0000040!2.79e-14!63;CL:0000559!2.79e-14!63;CL:0000048!3.06e-14!430;CL:0002009!4.09e-14!65;CL:0000723!1.01e-13!436;CL:0000625!1.44e-11!11;CL:0000945!1.73e-11!24;CL:0000826!1.73e-11!24;CL:0000236!7.08e-10!14 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.44e-27;18!CL:0000789;3.44e-27;18!CL:0002419;3.44e-27;18!CL:0000084;2.58e-23;25!CL:0000542;2.43e-21;53!CL:0000625;1.49e-20;11!CL:0000236;3.50e-14;13!CL:0000945;1.28e-10;24!CL:0000624;3.20e-10;6!CL:0002087;1.23e-08;104!CL:0000988;2.52e-07;177!CL:0000875;3.70e-07;3!CL:0002396;3.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.95e-41,168;CL:0000988,8.80e-38,177;CL:0002032,2.86e-36,161;CL:0000837,2.86e-36,161;CL:0000838,7.42e-36,52;CL:0000542,5.86e-35,53;CL:0000051,5.86e-35,53;CL:0000738,3.74e-29,136;CL:0002087,1.59e-27,115;CL:0000791,2.15e-27,18;CL:0000789,2.15e-27,18;CL:0002420,2.15e-27,18;CL:0002419,2.15e-27,18;CL:0000790,2.15e-27,18;CL:0002031,1.51e-25,120;CL:0000084,1.87e-23,25;CL:0000827,1.87e-23,25;CL:0000625,1.71e-20,11;CL:0000236,2.22e-15,14;CL:0000134,4.78e-11,354;CL:0000945,1.51e-10,24;CL:0000826,1.51e-10,24;CL:0000624,1.76e-10,6;CL:0002320,1.85e-10,361;CL:0000763,2.15e-09,108;CL:0000049,2.15e-09,108;CL:0000219,2.00e-08,386;CL:0002393,8.69e-08,9;CL:0002397,8.69e-08,9;CL:0000875,3.72e-07,3;CL:0002396,3.72e-07,3;CL:0000034,6.36e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000790;3.44e-27;18!CL:0000051;2.43e-21;53 | |||
|ontology_enrichment_disease=DOID:2531!6.58e-15!51;DOID:0060083!6.58e-15!51;DOID:1240!6.49e-12!39;DOID:8692!2.83e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;6.26e-07;39!DOID:8692;9.90e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.42e-08,39;DOID:2531,2.29e-08,51;DOID:0060083,2.29e-08,51;DOID:8692,2.00e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.27e-26!102;UBERON:0003061!5.27e-26!102;UBERON:0002193!6.96e-24!112;UBERON:0002384!1.56e-18!375;UBERON:0002371!1.04e-14!80;UBERON:0001474!2.44e-14!86;UBERON:0002405!1.13e-11!115;UBERON:0004765!1.17e-10!101;UBERON:0001434!1.17e-10!101;UBERON:0000178!1.84e-09!15;UBERON:0000179!1.84e-09!15;UBERON:0000463!1.84e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.05e-08;15!UBERON:0000179;4.05e-08;15!UBERON:0000463;4.05e-08;15!UBERON:0002390;4.81e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.15e-09,371;UBERON:0000178,3.58e-08,15;UBERON:0000179,3.58e-08,15;UBERON:0000463,3.58e-08,15;UBERON:0002390,5.79e-08,98;UBERON:0003061,5.79e-08,98;UBERON:0002193,3.72e-07,108 | |||
|phase1_expression=0.726713517082227,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.985207073399349,1.10195093839151,1.18009283054671,3.0706351847777,1.23852898652861,0,0,0,0.0774672005803016,0.568676929949686,1.76160263600908,0,0.802177789880567,0.217010870715852,0,0,0.257575567634187,0.290796477559129,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0.619412741790207,0.575384784644301,0.256160706529101,0.709446689665756,0.689491361473237,0.645484683583826,1.35426486594342,0,0.272906150057846,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0.659702600373432,0.398927315243264,2.55734850319616,0.290209238628584,1.13477044938228,0,0.251248665256743,1.0429658368404,1.52032191293582,0,1.10483290796269,0,5.91514801673437,3.82687739937078,3.56419697364239,0.561643155732475,0.901061357049038,0.964353520182481,6.84030584978997,7.35991705636633,7.67189445811463,1.75996244461323,2.73069305631066,3.55803701545422,2.13365111283254,1.20118796110804,2.29900975981793,3.30522436392431,0.954053754535364,0,3.52342313622563,2.29363936875137,7.93027971474155,1.68152568894461,3.95076127162616,1.96709770113833,1.57204305099666,1.43921049299656,5.01559486172034,3.2592226663359,2.36723902867367,3.89653456815823,4.56782873229212,3.53527088969805,2.21533894583621,1.89562704635511,2.43373507478783,1.95089021339817,4.76869923350661,2.21080014228679,5.21645554323094,3.41059095272739,1.07016331235885,2.09071047609954,7.0251792472491,8.81407135284419,11.6833331464094,11.6389058328971,4.45991580053735,4.55758417699493,10.4549724889321,3.16207750063323,3.07167866770604,8.74515085866421,9.23431282971666,5.74789597844733,4.63695509416885,3.7441627409691,3.62061009706997,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.132957960518865,1.19245312152671,1.71598473234038,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.340296549480063,0.179389635688862,0.213557388818567,0,1.20036438433761,0.824420233907511,0.257640540045629,0.18611685633159,0.168776332241266,0,0,0.276149695926898,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,6.62194649121976,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0.176096868026452,0.829312462163088,0.576479813667846,0.88369703398466,0,0,0,0,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,5.91092280605782,3.23441362289276,1.54011643535698,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,3.3082884179662,0.862856803274467,2.77491650288955,0,0,0,0.496215615637554,0.460385919864187,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97333888981341,0.784306353074702,0,0,0,0.206082023295445,2.1060976908219,4.37300349579116,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.170453254832202,0.356128142586949,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.196498082026242,0.35667105148125,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,0.764637207142375,2.27858874869665,3.09701308095126,1.64544909234478,0.648473311192717,2.70015718619057,2.37937552888281,0,0,0,0.185803175125719,3.02965347250534,5.83363115456996,0.159426272728822,1.79621434289535,1.34053759092657,0.423347165447766,0.973865820823666,2.24637742490767,0.912938716132769,1.09675927041116,2.50634477090067,0.846458889008016,3.21176150207399,3.8341944366299,3.40676990152261,1.71752672377882,0.307240764308458,0.671028323677248,0.500547425135725,0.781552381608161,0.278406173895242,0,1.89318974933188,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.552567831062295,0,0,1.23084805461069,0,0,0,0,0.394573622547734,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,4.08773192782946,1.09886179476517,1.66211681900156,0,0,0,0,4.92703394839174,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0.247127877893006,0,0,0,0,1.27718352450966,0,0,0,0,0.30607276163049,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0.19871461170299,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.38732940334862,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.508039992394707,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0.328370082997356,0,0,0,0,0,0,0,0,0.320362237703084,0.628817220398664,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0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| |||
|short_description=p10@ITGA4 | |||
}} |
Revision as of 07:21, 21 January 2014
Short description: | p10@ITGA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ITGA4_5end |
Coexpression cluster: | C1481_CD4_CD8_thymus_CD14CD16_CD14_granulocyte_CD19 |
Association with transcript: | 17bp_to_ENST00000478440_5end |
EntrezGene: | ITGA4 |
HGNC: | 6140 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.15e-09 | 371 |
blood | 3.58e-08 | 15 |
haemolymphatic fluid | 3.58e-08 | 15 |
organism substance | 3.58e-08 | 15 |
hematopoietic system | 5.79e-08 | 98 |
blood island | 5.79e-08 | 98 |
hemolymphoid system | 3.72e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.42e-08 | 39 |
hematologic cancer | 2.29e-08 | 51 |
immune system cancer | 2.29e-08 | 51 |
myeloid leukemia | 2.00e-07 | 31 |