FFCP PHASE1:Hg19::chr2:134877491..134877513,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4249 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7049 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-40bp_to_ENST00000468758,ENST00000481801_5end | |||
|description=CAGE_peak_1_at_MGAT5_5end | |||
|id=chr2:134877491..134877513,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.57e-12!140;CL:0000838!6.48e-11!52;CL:0000542!1.29e-10!53;CL:0000051!1.29e-10!53;CL:0002087!5.01e-09!119;CL:0002031!6.21e-09!124;CL:0000791!1.10e-07!18;CL:0000789!1.10e-07!18;CL:0002420!1.10e-07!18;CL:0002419!1.10e-07!18;CL:0000790!1.10e-07!18;CL:0000037!1.26e-07!172;CL:0000566!1.26e-07!172;CL:0000236!1.72e-07!14;CL:0000945!5.01e-07!24;CL:0000826!5.01e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.43e-08;13!CL:0000791;1.10e-07;18!CL:0000789;1.10e-07;18!CL:0002419;1.10e-07;18!CL:0000945;3.80e-07;24!CL:0000542;9.37e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.04e-12,136;CL:0000838,6.42e-11,52;CL:0000542,1.28e-10,53;CL:0000051,1.28e-10,53;CL:0002087,6.50e-10,115;CL:0002031,8.71e-10,120;CL:0000037,3.02e-08,168;CL:0000791,1.10e-07,18;CL:0000789,1.10e-07,18;CL:0002420,1.10e-07,18;CL:0002419,1.10e-07,18;CL:0000790,1.10e-07,18;CL:0000236,1.72e-07,14;CL:0002032,3.30e-07,161;CL:0000837,3.30e-07,161;CL:0000945,5.01e-07,24;CL:0000826,5.01e-07,24;CL:0000988,9.11e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.10e-07;18!CL:0000051;9.37e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.26e-10!115;UBERON:0001049!3.81e-07!57;UBERON:0005068!3.81e-07!57;UBERON:0006241!3.81e-07!57;UBERON:0007135!3.81e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.33e-10,114;UBERON:0001049,1.48e-07,56;UBERON:0005068,1.48e-07,56;UBERON:0006241,1.48e-07,56;UBERON:0007135,1.48e-07,56;UBERON:0000073,5.25e-07,53;UBERON:0002616,5.25e-07,53 | |||
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| |||
|short_description=p1@MGAT5 | |||
}} |
Revision as of 05:30, 21 January 2014
Short description: | p1@MGAT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MGAT5_5end |
Coexpression cluster: | NA |
Association with transcript: | -40bp_to_ENST00000468758, ENST00000481801_5end |
EntrezGene: | MGAT5 |
HGNC: | 7049 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.04e-12 | 136 |
lymphoid lineage restricted progenitor cell | 6.42e-11 | 52 |
lymphocyte | 1.28e-10 | 53 |
common lymphoid progenitor | 1.28e-10 | 53 |
nongranular leukocyte | 6.50e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 8.71e-10 | 120 |
hematopoietic stem cell | 3.02e-08 | 168 |
mature alpha-beta T cell | 1.10e-07 | 18 |
alpha-beta T cell | 1.10e-07 | 18 |
immature T cell | 1.10e-07 | 18 |
mature T cell | 1.10e-07 | 18 |
immature alpha-beta T cell | 1.10e-07 | 18 |
B cell | 1.72e-07 | 14 |
hematopoietic oligopotent progenitor cell | 3.30e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.30e-07 | 161 |
lymphocyte of B lineage | 5.01e-07 | 24 |
pro-B cell | 5.01e-07 | 24 |
hematopoietic cell | 9.11e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.33e-10 | 114 |
neural tube | 1.48e-07 | 56 |
neural rod | 1.48e-07 | 56 |
future spinal cord | 1.48e-07 | 56 |
neural keel | 1.48e-07 | 56 |
regional part of nervous system | 5.25e-07 | 53 |
regional part of brain | 5.25e-07 | 53 |