FFCP PHASE1:Hg19::chr2:85637502..85637513,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=822 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1474 | |||
|TSSclassifier=strong | |||
|UniProt=B8ZZS7 | |||
|association_with_transcript=-9bp_to_ENST00000409921_5end | |||
|coexpression_cluster_id=C602 | |||
|description=CAGE_peak_5_at_CAPG_5end | |||
|id=chr2:85637502..85637513,- | |||
|ontology_enrichment_celltype=CL:0000557!1.48e-26!71;CL:0000763!9.85e-26!112;CL:0000049!9.85e-26!112;CL:0000037!1.12e-25!172;CL:0000566!1.12e-25!172;CL:0002032!1.65e-25!165;CL:0000837!1.65e-25!165;CL:0000839!6.45e-24!70;CL:0002031!9.55e-23!124;CL:0000988!1.50e-22!182;CL:0002009!1.53e-22!65;CL:0000766!3.27e-22!76;CL:0000738!1.21e-21!140;CL:0002194!2.39e-21!63;CL:0000576!2.39e-21!63;CL:0000040!2.39e-21!63;CL:0000559!2.39e-21!63;CL:0002087!3.98e-19!119;CL:0000860!3.58e-13!45;CL:0002057!4.27e-13!42;CL:0000063!6.08e-08!578;CL:0000134!2.40e-07!358;CL:0000219!5.88e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.69e-13;39!CL:0000234;2.69e-13;39!CL:0000235;1.08e-11;6!CL:0000766;1.88e-11;69!CL:0000763;3.33e-11;100!CL:0000576;1.63e-10;48!CL:0000097;7.76e-10;5!CL:0000860;3.53e-08;33!CL:0002057;3.53e-08;33!CL:0000163;3.90e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.39e-33,108;CL:0000049,9.39e-33,108;CL:0000557,1.24e-32,67;CL:0000839,4.13e-28,66;CL:0000766,8.14e-28,72;CL:0002009,3.22e-25,61;CL:0002032,7.96e-25,161;CL:0000837,7.96e-25,161;CL:0002194,4.80e-23,59;CL:0000576,4.80e-23,59;CL:0000040,4.80e-23,59;CL:0000559,4.80e-23,59;CL:0000037,5.58e-23,168;CL:0000988,7.83e-21,177;CL:0002031,4.80e-20,120;CL:0000738,8.48e-18,136;CL:0000473,1.97e-16,48;CL:0000234,1.97e-16,48;CL:0002087,1.01e-13,115;CL:0000235,1.12e-11,6;CL:0000219,4.81e-10,386;CL:0000860,5.66e-10,42;CL:0002057,5.66e-10,42;CL:0000097,7.95e-10,5;CL:0002028,7.95e-10,5;CL:0000134,2.20e-09,354;CL:0002320,8.20e-09,361;CL:0000163,4.27e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000049;5.68e-09;108!CL:0002057;4.40e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;7.32e-08;31!DOID:1240;8.20e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,9.37e-09,39;DOID:8692,2.67e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002371!7.26e-24!80;UBERON:0002390!4.23e-22!102;UBERON:0003061!4.23e-22!102;UBERON:0001474!6.87e-21!86;UBERON:0002193!1.37e-17!112;UBERON:0004765!3.65e-17!101;UBERON:0001434!3.65e-17!101;UBERON:0002405!3.32e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.73e-27,76;UBERON:0001474,3.49e-24,82;UBERON:0002405,6.27e-21,93;UBERON:0004765,7.39e-21,90;UBERON:0002390,3.14e-20,98;UBERON:0003061,3.14e-20,98;UBERON:0001434,1.19e-18,100;UBERON:0002193,4.05e-17,108;UBERON:0002204,2.99e-09,167;UBERON:0002384,1.91e-08,371 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0,2.18441372130172,1.05506791291381,0.37129905888014,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.273748850145768,0,0.534893840235659,0.656804715599566,0.550975469195755,1.96682138424452,0.383829398097213,2.01260960310899,0,0.30120591877825,0.369754010166788,0.154934401160603,0,0.293600439334847,3.32397245119126,0.401088894940283,0.868043482863407,19.9284772073533,13.6035339727971,11.5909005435384,2.18097358169347,1.51150377475524,0.970336244751265,1.16214518452842,0.411167888021826,0.929119112685311,2.3015391385772,0.512321413058201,0.945928919554341,2.06847408441971,0,1.35426486594342,1.88242339542605,0,1.57306439111559,2.14258724659632,0.641858054152187,1.91801137739712,1.31940520074686,0.598390972864896,1.27867425159808,2.32167390902867,0.56738522469114,1.86846674698672,1.7587406567972,0.521482918420201,0.65156653411535,0.605399502633369,1.10483290796269,0.316462387440884,2.5350634357433,0.850417199860174,1.67726916406701,2.80821577866238,1.80212271409808,0.803627933485401,0.855038231223746,0,0,1.75996244461323,1.63841583378639,0,0,0,1.14950487990897,1.98313461835459,0.954053754535364,0.569212969109448,0.587237189370939,0.382273228125229,0,1.12101712596307,0.790152254325231,0.196709770113833,0.786021525498329,0.411202997999018,0.668745981562712,0.651844533267181,0,0,1.55974639639243,0.294605907474837,0.664601683750863,0.270803863765016,0.640456598628376,0.390178042679635,3.12432018746985,1.65810010671509,0.869409257205157,0.14828656316206,0,1.04535523804977,1.47302145506836,0.383220493601921,0.68725489096526,0.253019692019503,0.318565414324097,0,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0,0,0,0.289648807765598,0,0,0,4.69870898099936,0,2.60723734129483,4.7717156823066,3.40644409211845,0,0,0,0.196468613246569,0.364295288292542,0,0.649094787309367,1.21890816109487,9.04114131528283,0.953962497221368,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,1.02077085627447,0.122834317311768,0.413303124703062,0,0.247266929278557,0,0,0,0,0.554128230968366,0,0.612975591598039,0,0,0.179389635688862,0,0,0,0.515262646192195,0.257640540045629,0.18611685633159,0.337552664482532,0,0,0,0,0,0.10075209822764,0,1.15956511897978,0.818238361772504,1.14721838155602,0.243947412259191,0.397589304964456,0,0.207322110030741,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.591534000199219,1.51726221070292,1.20505514941741,1.10293972732394,0.435758888184812,1.18635309555548,0.539325232640658,1.17732879075208,1.15424147083917,0,0,0,0,0,0,0,0,0,0.857839051492628,0.658501712451753,0,0.402115889646523,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,3.1608175918371,2.57545848628462,34.2241638461482,39.3127165433919,30.1721259446118,0,0,0.283550194484773,0.626909658919938,0,0.383382679165211,17.243213326358,28.0874504502191,13.4763275101502,14.7002352485301,12.2455160423589,0.444485260045183,2.67391897890794,7.03304683260282,1.71072446022705,0.102827492703324,1.20137223137567,1.14330573052231,0,0,0.2933531432838,0.387815147273333,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0.904318131178758,0,1.29964888536674,18.2435670961786,17.0767411086923,21.0833939483032,0.718874566474748,0,0,0.434343920002738,0.821905290201534,3.40215830155802,1.68127715990291,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.24782516918484,0.535286966391485,2.20783381047509,0.702848489956279,0,2.27407504055985,0,0,0,0,0,0,0,0.431428401637234,0.533637789017222,0.909382714338778,1.66435439510497,1.20956117331872,0.248107807818777,0.767309866440312,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0.519254429183621,0,0.120859449591622,0.40101294060657,0.0920809889358963,0.114814448164607,0.364182336013434,0,0,0.15403067420883,0,0,0,0,0,0,0,0.270946437543853,0,2.54876273045038,1.66215201785745,0.895499018888713,0.219259876645935,0,0,0.984043937099117,0,0.103041011647722,0,0,0,0,0,0.676695028044854,0.308097234229289,0,0.275673144969061,0,0,0.255679882248303,0.267096106940212,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0.767693373934002,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9555068941673,0.329294892959902,0,0.349934720244983,0.48111056362756,0,0,0,0.43050537267123,0,1.33029046061003,0.459446800413919,0.507447609232169,0.764637207142375,0,0.238231775457789,1.23408681925858,0.648473311192717,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0.185803175125719,0,0,1.59426272728822,1.59663497146253,5.55365573383863,3.38677732358213,0,5.33514638415572,5.70586697582981,0.156679895773023,2.50634477090067,0.169291777801603,0.642352300414798,1.61439765752838,2.55507742614196,2.06103206853459,2.76516687877612,3.35514161838624,2.83643540910244,3.51698571723673,1.113624695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| |||
|short_description=p5@CAPG | |||
}} |
Revision as of 04:11, 21 January 2014
Short description: | p5@CAPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CAPG_5end |
Coexpression cluster: | C602_Macrophage_Monocytederived_CD14_Mast_Dendritic_lung_adipose |
Association with transcript: | -9bp_to_ENST00000409921_5end |
EntrezGene: | CAPG |
HGNC: | 1474 |
UniProt: | B8ZZS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 9.39e-33 | 108 |
common myeloid progenitor | 9.39e-33 | 108 |
granulocyte monocyte progenitor cell | 1.24e-32 | 67 |
myeloid lineage restricted progenitor cell | 4.13e-28 | 66 |
myeloid leukocyte | 8.14e-28 | 72 |
macrophage dendritic cell progenitor | 3.22e-25 | 61 |
hematopoietic oligopotent progenitor cell | 7.96e-25 | 161 |
hematopoietic multipotent progenitor cell | 7.96e-25 | 161 |
monopoietic cell | 4.80e-23 | 59 |
monocyte | 4.80e-23 | 59 |
monoblast | 4.80e-23 | 59 |
promonocyte | 4.80e-23 | 59 |
hematopoietic stem cell | 5.58e-23 | 168 |
hematopoietic cell | 7.83e-21 | 177 |
hematopoietic lineage restricted progenitor cell | 4.80e-20 | 120 |
leukocyte | 8.48e-18 | 136 |
defensive cell | 1.97e-16 | 48 |
phagocyte | 1.97e-16 | 48 |
nongranular leukocyte | 1.01e-13 | 115 |
macrophage | 1.12e-11 | 6 |
motile cell | 4.81e-10 | 386 |
classical monocyte | 5.66e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.66e-10 | 42 |
mast cell | 7.95e-10 | 5 |
basophil mast progenitor cell | 7.95e-10 | 5 |
mesenchymal cell | 2.20e-09 | 354 |
connective tissue cell | 8.20e-09 | 361 |
endocrine cell | 4.27e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.73e-27 | 76 |
bone element | 3.49e-24 | 82 |
immune system | 6.27e-21 | 93 |
skeletal element | 7.39e-21 | 90 |
hematopoietic system | 3.14e-20 | 98 |
blood island | 3.14e-20 | 98 |
skeletal system | 1.19e-18 | 100 |
hemolymphoid system | 4.05e-17 | 108 |
musculoskeletal system | 2.99e-09 | 167 |
connective tissue | 1.91e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.37e-09 | 39 |
myeloid leukemia | 2.67e-08 | 31 |