FFCP PHASE1:Hg19::chr2:65659725..65659739,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200734 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17722 | |||
|TSSclassifier=strong | |||
|UniProt=C9J623 | |||
|association_with_transcript=31bp_to_ENST00000440972_5end | |||
|description=CAGE_peak_2_at_SPRED2_5end | |||
|id=chr2:65659725..65659739,- | |||
|ontology_enrichment_celltype=CL:0000223!5.61e-08!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,3.37e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.54e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.07e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0000062!5.80e-14!511;UBERON:0000475!6.32e-14!365;UBERON:0002050!3.51e-11!605;UBERON:0005423!3.51e-11!605;UBERON:0000923!3.83e-11!604;UBERON:0005291!3.83e-11!604;UBERON:0006598!3.83e-11!604;UBERON:0002532!3.83e-11!604;UBERON:0000924!4.06e-11!173;UBERON:0006601!4.06e-11!173;UBERON:0000922!4.10e-11!612;UBERON:0000468!1.15e-10!659;UBERON:0004121!3.34e-10!169;UBERON:0004119!3.41e-10!169;UBERON:0000925!3.41e-10!169;UBERON:0006595!3.41e-10!169;UBERON:0000467!4.53e-10!625;UBERON:0000480!8.16e-10!626;UBERON:0000481!5.61e-09!347;UBERON:0001007!1.03e-08!155;UBERON:0001555!1.03e-08!155;UBERON:0007026!1.03e-08!155;UBERON:0005911!3.29e-08!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.09e-10,171;UBERON:0000924,6.09e-10,171;UBERON:0006601,6.09e-10,171;UBERON:0000922,4.23e-09,592;UBERON:0011216,5.23e-09,223;UBERON:0004119,1.04e-08,160;UBERON:0000925,1.04e-08,160;UBERON:0006595,1.04e-08,160;UBERON:0005423,1.78e-08,581;UBERON:0005911,3.21e-08,82;UBERON:0001007,2.50e-07,145;UBERON:0001555,2.50e-07,145;UBERON:0007026,2.50e-07,145;UBERON:0002050,6.53e-07,564 | |||
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| |||
|short_description=p2@SPRED2 | |||
}} |
Revision as of 03:34, 21 January 2014
Short description: | p2@SPRED2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPRED2_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000440972_5end |
EntrezGene: | SPRED2 |
HGNC: | 17722 |
UniProt: | C9J623 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 3.37e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.09e-10 | 171 |
ectoderm | 6.09e-10 | 171 |
presumptive ectoderm | 6.09e-10 | 171 |
embryo | 4.23e-09 | 592 |
organ system subdivision | 5.23e-09 | 223 |
endoderm-derived structure | 1.04e-08 | 160 |
endoderm | 1.04e-08 | 160 |
presumptive endoderm | 1.04e-08 | 160 |
developing anatomical structure | 1.78e-08 | 581 |
endo-epithelium | 3.21e-08 | 82 |
digestive system | 2.50e-07 | 145 |
digestive tract | 2.50e-07 | 145 |
primitive gut | 2.50e-07 | 145 |
embryonic structure | 6.53e-07 | 564 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.07e-09 | 143 |