FFCP PHASE1:Hg19::chr2:46656215..46656234,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4232 | |||
|description=CAGE_peak_at_chr2:46656215..46656234,- | |||
|id=chr2:46656215..46656234,- | |||
|ontology_enrichment_celltype=CL:0002541!6.11e-30!3;CL:0000039!2.01e-23!7;CL:0000586!2.01e-23!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.15e-29;7!CL:0000586;8.15e-29;7!CL:0002541;3.20e-17;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.32e-29,7;CL:0000586,7.32e-29,7;CL:0002541,3.20e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.10e-20;10!UBERON:0005564;5.10e-20;10!UBERON:0003124;7.09e-14;1 | |||
|ontology_enrichment_disease=DOID:1036!3.93e-12!8;DOID:2355!1.31e-11!1;DOID:3095!1.35e-07!22;DOID:2994!1.35e-07!22;DOID:2531!8.26e-07!51;DOID:0060083!8.26e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;7.29e-15;8!DOID:2355;7.09e-14;1!DOID:3095;2.26e-09;22!DOID:2994;2.26e-09;22!DOID:74;1.40e-07;2!DOID:1240;2.49e-07;39!DOID:8692;5.61e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,7.29e-15,8;DOID:2355,5.15e-14,1;DOID:3095,2.19e-09,22;DOID:2994,2.19e-09,22;DOID:2531,1.31e-08,51;DOID:0060083,1.31e-08,51;DOID:1240,4.55e-08,39;DOID:74,1.20e-07,2;DOID:8692,9.39e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.71e-31!8;UBERON:0000476!6.11e-30!3;UBERON:0000920!6.11e-30!3;UBERON:0003124!9.37e-23!7;UBERON:0003135!1.75e-22!11;UBERON:0005631!2.03e-17!14;UBERON:0000158!2.03e-17!14;UBERON:0000991!9.42e-12!21;UBERON:0009196!9.42e-12!21;UBERON:0009117!9.42e-12!21;UBERON:0005564!9.42e-12!21;UBERON:0004176!3.26e-11!22;UBERON:0003101!3.26e-11!22;UBERON:0000079!3.26e-11!22;UBERON:0000478!3.93e-10!24;UBERON:0003133!4.65e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.30e-25;8!UBERON:0003135;3.13e-18;11!UBERON:0003124;3.20e-17;3!UBERON:0000920;3.20e-17;3!UBERON:0000991;1.11e-09;21!UBERON:0003101;2.98e-09;22!UBERON:0000079;2.98e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.30e-25,8;UBERON:0003135,3.13e-18,11;UBERON:0000920,3.20e-17,3;UBERON:0003124,2.31e-16,7;UBERON:0000991,1.11e-09,21;UBERON:0009196,1.11e-09,21;UBERON:0009117,1.11e-09,21;UBERON:0005564,1.11e-09,21;UBERON:0004176,2.98e-09,22;UBERON:0003101,2.98e-09,22;UBERON:0000079,2.98e-09,22;UBERON:0005631,1.79e-08,14;UBERON:0000158,1.79e-08,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34087408674291,0,0,0,0,0,0,0,10.252791353528,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.9169171316418,0,0,1.91400695839152,0.457987967009312,2.66517388009317,0,0,0,3.38393490925771,4.11731322067253,6.54504189205787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8102999429603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10458295569236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67159787071134,2.93939145792117,3.21632148371957,0,0.833565680400634,1.60778478093707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:46656215..46656234,- | |||
}} |
Revision as of 02:57, 21 January 2014
Short description: | p@chr2:46656215..46656234, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:46656215..46656234, - |
Coexpression cluster: | C4232_choriocarcinoma_testis_adult_chronic_placenta_testicular_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.32e-29 | 7 |
germ cell | 7.32e-29 | 7 |
chorionic membrane mesenchymal stem cell | 3.20e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 6.30e-25 | 8 |
male reproductive organ | 3.13e-18 | 11 |
egg chorion | 3.20e-17 | 3 |
chorion | 2.31e-16 | 7 |
gonad | 1.11e-09 | 21 |
indifferent external genitalia | 1.11e-09 | 21 |
indifferent gonad | 1.11e-09 | 21 |
gonad primordium | 1.11e-09 | 21 |
external genitalia | 2.98e-09 | 22 |
male organism | 2.98e-09 | 22 |
male reproductive system | 2.98e-09 | 22 |
extraembryonic membrane | 1.79e-08 | 14 |
membranous layer | 1.79e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.29e-15 | 8 |
anemia | 5.15e-14 | 1 |
germ cell and embryonal cancer | 2.19e-09 | 22 |
germ cell cancer | 2.19e-09 | 22 |
hematologic cancer | 1.31e-08 | 51 |
immune system cancer | 1.31e-08 | 51 |
leukemia | 4.55e-08 | 39 |
hematopoietic system disease | 1.20e-07 | 2 |
myeloid leukemia | 9.39e-07 | 31 |