FFCP PHASE1:Hg19::chr2:38466754..38466766,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-22bp_to_ENST00000450854_5end | |||
|coexpression_cluster_id=C77 | |||
|description=CAGE_peak_2_at_ENST00000450854_5end | |||
|id=chr2:38466754..38466766,- | |||
|ontology_enrichment_celltype=CL:0000153!7.41e-09!9;CL:0000447!7.41e-09!9;CL:0000499!5.57e-08!27;CL:0000135!1.64e-07!3;CL:0000386!1.64e-07!3;CL:0000388!1.64e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000062;1.16e-20;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,4.85e-17,11;CL:0000375,4.85e-17,11;CL:0000335,4.85e-17,11 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.16e-21;1!CL:0000335;4.84e-17;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;5.16e-21;1!DOID:3149;5.16e-21;1!DOID:3451;3.34e-11;2!DOID:4159;3.34e-11;2!DOID:0060122;3.34e-11;2!DOID:154;3.34e-11;2!DOID:4236;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,7.72e-21,1;DOID:3149,7.72e-21,1;DOID:154,2.47e-11,2;DOID:4236,2.47e-11,2;DOID:3451,4.09e-11,2;DOID:4159,4.09e-11,2;DOID:0060122,4.09e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!9.35e-15!9;UBERON:0000043!1.64e-07!3;UBERON:0006947!1.91e-07!3;UBERON:0004054!1.91e-07!3;UBERON:0004175!4.57e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;5.16e-21;1!UBERON:0009842;5.16e-21;1!UBERON:0003704;5.16e-21;1!UBERON:0001171;5.16e-21;1!UBERON:0001172;5.16e-21;1!UBERON:0001474;1.12e-10;18!UBERON:0001280;6.78e-08;3!UBERON:0004647;6.78e-08;3!UBERON:0004765;1.43e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,6.31e-21,1;UBERON:0009842,6.31e-21,1;UBERON:0003704,6.31e-21,1;UBERON:0001171,6.31e-21,1;UBERON:0001172,6.31e-21,1;UBERON:0001280,7.26e-08,3;UBERON:0004647,7.26e-08,3;UBERON:0005171,7.26e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0.655324116390517,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0,0.434539556882471,0.795285947051099,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.505754070234305,0.482022059766964,0.55146986366197,0.217879444092406,0.237270619111097,0.269662616320329,0.784885860501384,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.630809660135739,0.468565659970853,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,5.76887628355563,11.7163489887235,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0.173624994933292,0,0,0,0,0,0,2.06983080686081,0,0.153900517007594,1.36730467016401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0.505492637027904,0,0,0,0,0,0,0.853828638089378,0,0.347119476670262,0,0.435296032902013,0.34945333648406,0,0.0967563312890851,0.146178634172371,0,0,0,0,0,0,0,0,0.0801588202515337,0,0.599428828746391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34173875039706,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.681552087141687,0,0,0,0,0,0,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565909307848,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,1.39241355481392,0,0,0,0,0.163771917510097,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,1.06442844195167,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0.829169439458779,0,0.213233981900981,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENST00000450854 | |||
}} |
Revision as of 02:40, 21 January 2014
Short description: | p2@ENST00000450854 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000450854_5end |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | -22bp_to_ENST00000450854_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 4.85e-17 | 11 |
osteoprogenitor cell | 4.85e-17 | 11 |
mesenchyme condensation cell | 4.85e-17 | 11 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 6.31e-21 | 1 |
acinus | 6.31e-21 | 1 |
intrahepatic bile duct | 6.31e-21 | 1 |
portal lobule | 6.31e-21 | 1 |
hepatic acinus | 6.31e-21 | 1 |
liver parenchyma | 7.26e-08 | 3 |
liver lobule | 7.26e-08 | 3 |
hepatic duct | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 7.72e-21 | 1 |
keratoacanthoma | 7.72e-21 | 1 |
mixed cell type cancer | 2.47e-11 | 2 |
carcinosarcoma | 2.47e-11 | 2 |
skin carcinoma | 4.09e-11 | 2 |
skin cancer | 4.09e-11 | 2 |
integumentary system cancer | 4.09e-11 | 2 |