FFCP PHASE1:Hg19::chr2:30454390..30454409,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81606 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29532 | |||
|TSSclassifier=strong | |||
|UniProt=Q53QV2,B5MC28,B5MCM2,F8WC18 | |||
|association_with_transcript=0bp_to_ENST00000395323,ENST00000404397,ENST00000406087,ENST00000412933,ENST00000464412,NM_030915,uc002rne.2_5end | |||
|description=CAGE_peak_1_at_LBH_5end | |||
|id=chr2:30454390..30454409,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.24e-10!52;CL:0000542!2.54e-10!53;CL:0000051!2.54e-10!53;CL:0000791!1.87e-09!18;CL:0000789!1.87e-09!18;CL:0002420!1.87e-09!18;CL:0002419!1.87e-09!18;CL:0000790!1.87e-09!18;CL:0000084!7.12e-07!25;CL:0000827!7.12e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.81e-09;18!CL:0000789;1.81e-09;18!CL:0002419;1.81e-09;18!CL:0000084;5.55e-07;25!CL:0000542;5.80e-07;53!CL:0000625;9.94e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.65e-10,52;CL:0000542,1.88e-10,53;CL:0000051,1.88e-10,53;CL:0000791,1.84e-09,18;CL:0000789,1.84e-09,18;CL:0002420,1.84e-09,18;CL:0002419,1.84e-09,18;CL:0000790,1.84e-09,18;CL:0000084,5.69e-07,25;CL:0000827,5.69e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.81e-09;18!CL:0000051;5.80e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=262.343579666684,472.948057275182,277.680176069063,899.658952194642,503.278192325126,469.318125965998,141.847931774254,13.8978372153903,10.9697963843932,66.1024289189059,55.1262922698218,54.6103430325431,76.75619066448,0.866364470720326,1.98838425436749,20.1697543935533,24.1077811209591,16.7971320789096,15.6138495612962,45.8010336045651,23.8680808755776,129.45679997045,24.6162948932709,25.1848942134107,69.0484517771415,51.4262220683712,42.8565076928717,42.4251111280731,30.2890493173656,52.5846275393181,20.5905444010381,6.43594857135249,10.2410012384605,1.84877005083394,20.6062753543602,1.56386155736164,6.45920966536664,13.8498852132969,21.0571669843649,41.2320654360118,4.47830948479849,24.6159186174424,6.69696475848885,2.4717700592526,6.42389104270976,3.39617685662943,3.48643555358527,10.2791972005456,18.5823822537062,4.02769349251011,5.89169625016932,7.09446689665756,3.7922024881028,12.9096936716765,13.5426486594342,2.25890807451126,6.5497476013883,8.09004544002305,4.28517449319264,6.73950956859797,15.344091019177,2.63881040149373,5.18605509816243,3.40979800426155,3.77272010217159,13.0498601678962,20.553134216854,5.02497330513487,4.69334626578181,5.42972111762792,9.6863920421339,25.411156883142,11.3926459478718,1.26753171787165,0.850417199860174,0.419317291016752,0.112328631146495,0,0,1.42506371870624,2.78483348078726,1.27864907635244,246.394742245852,219.547721727377,239.277989289296,237.688733969545,239.837196234571,193.116819824706,216.16167340065,209.89182599778,96.7662047486062,64.5960908308033,87.1582960125522,1.32171328579026,25.7833938971507,5.53106578027662,91.86346264316,110.829035095264,130.351350365689,64.3668007254111,201.745883046192,201.215317437262,350.68811113424,47.6836755468543,105.174308968517,117.191430234736,127.007012105792,70.962591128024,81.0269735298041,116.75091226861,113.027157274412,64.3362850331817,156.590610699136,194.502182021221,280.155203797338,64.9262533657054,154.054638427972,142.605389875291,134.100436770337,172.343889149336,169.281698002669,168.230011867362,208.395964803638,209.642069070937,113.686961162635,154.615545584743,170.794623359578,82.6587647221403,112.05744203329,126.431704589684,9.75227465255847,16.0968206328873,94.2347080786818,53.4929945529158,200.03382634372,148.322835415883,159.05718941022,206.333185008318,23.9173087425092,53.6585141859405,67.0179414838552,56.2555129262676,8.37879163072847,0.741568885568859,2.27183175558278,0.696518949197069,3.32394901297163,10.7320780937404,11.4398982156026,18.9443325678078,1.59009925893364,0,0.694281003215189,0,2.09749718104953,0.550236083880135,1.8809546988313,14.7297552726517,23.4805733373229,18.7443543148215,30.6150281002952,44.0957821316737,25.3824539850096,2.20597848207521,10.5318453224629,3.03619076165871,2.02076435363553,2.0270066486998,7.66583187329416,2.84779697870439,5.49605231791222,6.58902087180316,19.3890132074163,6.10531672999548,122.752072068744,73.6989577887854,8.20936921041957,38.436107180341,34.4028330732406,152.504307238708,71.5218271389023,66.1069029757989,32.3659476815757,5.38842688278752,3.75962377160955,6.50836938873205,9.21881479167998,1.64025002283658,0.312160076830321,1.71141546463335,2.24173020827702,9.98193238472001,16.9966591586538,16.7136459975676,0,1.47401180774122,1.13658359293342,5.94001428641027,31.8974338769338,7.28129089550421,10.0606539854273,2.86171393721913,3.1279629967991,0.831192346452549,54.4332249892239,64.0559493219951,28.0945170155336,16.6745309245231,111.93913266985,305.60062339937,164.883019102139,132.340173373221,232.177348374203,306.334602114253,417.646225608088,131.645539148188,322.613924088729,207.752996202906,300.174719472538,15.3563753977871,335.484064928201,301.349525798872,137.344079771495,28.022823708678,10.6370987030426,10.6117700293931,44.5204027373023,50.3613119621644,50.8929469768491,36.385030310395,47.6886408154938,39.4175547801896,62.5798129319264,111.280682307369,55.2539685409922,61.2965665002212,146.541534778926,2.36613600079688,2.69735504124963,0.723033089650446,3.52940712743661,3.26819166138609,0.474541238222193,2.02246962240247,1.76599318612811,0.769494313892781,62.0050581884704,44.8773676171027,77.3759141303032,145.538624271687,2.53510069643662,3.9313088667105,23.0408063605748,41.9389944443918,80.3114503686532,38.4311895068697,3.84125998930189,4.49607013030478,0.402115889646523,2.59247646443883,0.651616610620649,0,64.949103911373,29.3303924586944,115.412746433813,37.246543522357,25.4642031917136,28.5381228351897,0,0,0.492434012174795,0.936017060556951,0.743155811443641,11.2480600784132,23.3495158196415,11.6255579738757,0.806026704325635,0.290633938513962,3.06706143332169,167.505500884621,114.991254821273,25.501358211515,11.38547631994,16.1590314785766,11.0486336068374,12.9876064689814,17.582617081507,17.1072446022705,15.4241239054985,0.300343057843917,32.8700397525165,1.23344192779897,6.10344096366592,0.8800594298514,5.04159691455333,17.8828222925941,9.298330278116,446.776035862582,810.217933539542,2.05765899409714,0,1.5985330740966,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| |||
|short_description=p1@LBH | |||
}} |
Revision as of 02:27, 21 January 2014
Short description: | p1@LBH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LBH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000395323, ENST00000404397, ENST00000406087, ENST00000412933, ENST00000464412, NM_030915, uc002rne.2_5end |
EntrezGene: | LBH |
HGNC: | 29532 |
UniProt: | Q53QV2B5MC28B5MCM2F8WC18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.65e-10 | 52 |
lymphocyte | 1.88e-10 | 53 |
common lymphoid progenitor | 1.88e-10 | 53 |
mature alpha-beta T cell | 1.84e-09 | 18 |
alpha-beta T cell | 1.84e-09 | 18 |
immature T cell | 1.84e-09 | 18 |
mature T cell | 1.84e-09 | 18 |
immature alpha-beta T cell | 1.84e-09 | 18 |
T cell | 5.69e-07 | 25 |
pro-T cell | 5.69e-07 | 25 |