FFCP PHASE1:Hg19::chr2:27545939..27545981,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4358 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7224 | |||
|TSSclassifier=strong | |||
|UniProt=P39210,A8MTD3,B5MC10,G5E9F5,C9J473 | |||
|association_with_transcript=0bp_to_ENST00000380044,ENST00000399052,ENST00000402722,ENST00000405076,ENST00000426513,ENST00000428910,ENST00000486898,ENST00000489478,ENST00000494436,ENST00000495429,ENST00000497981,NM_002437,uc002rjs.2_5end | |||
|coexpression_cluster_id=C1142 | |||
|description=CAGE_peak_1_at_MPV17_5end | |||
|id=chr2:27545939..27545981,- | |||
|ontology_enrichment_celltype=CL:0000055!9.04e-36!180;CL:0002371!1.39e-21!591;CL:0000144!1.21e-19!625;CL:0000222!3.94e-19!119;CL:0000183!2.50e-18!59;CL:0000057!3.28e-17!75;CL:0000548!1.43e-16!679;CL:0000004!1.43e-16!679;CL:0000255!1.43e-16!679;CL:0000680!1.96e-16!57;CL:0000056!1.96e-16!57;CL:0000355!1.96e-16!57;CL:0000012!3.72e-16!682;CL:0000187!8.68e-16!54;CL:0000192!9.30e-14!42;CL:0000514!9.30e-14!42;CL:0000393!2.24e-12!60;CL:0000211!2.24e-12!60;CL:0000048!2.25e-11!430;CL:0000723!7.22e-11!436;CL:0000220!1.33e-10!246;CL:0002321!3.77e-10!248;CL:0000359!6.08e-10!32;CL:0000003!1.05e-09!722;CL:0000034!1.30e-09!444 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.06e-10;43!CL:0000359;1.79e-09;32!CL:0000187;1.88e-09;55!CL:0000134;1.38e-08;55!CL:0000723;3.27e-08;61!CL:0000048;3.33e-08;58!CL:0000393;1.24e-07;61!CL:0000211;1.24e-07;61!CL:0000057;1.90e-07;73!CL:0002320;4.27e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.73e-20,121;CL:0000057,2.78e-17,76;CL:0000680,8.68e-17,58;CL:0000056,8.68e-17,58;CL:0000355,8.68e-17,58;CL:0000187,3.85e-16,55;CL:0000192,4.15e-14,43;CL:0000514,4.15e-14,43;CL:0000393,1.04e-12,61;CL:0000211,1.04e-12,61;CL:0000048,1.24e-11,427;CL:0000723,4.05e-11,433;CL:0002321,1.28e-10,250;CL:0000359,6.08e-10,32;CL:0000034,7.59e-10,441 | |||
|ontology_enrichment_development_v019=CL:0000514;2.06e-10;43!CL:0000355;1.89e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.24e-18!83;UBERON:0002329!8.24e-18!83;UBERON:0003077!8.24e-18!83;UBERON:0003059!8.24e-18!83;UBERON:0007282!8.24e-18!83;UBERON:0009618!8.24e-18!83;UBERON:0007285!8.24e-18!83;UBERON:0004290!2.34e-16!70;UBERON:0000486!7.71e-16!82;UBERON:0001134!1.59e-13!61;UBERON:0002036!1.59e-13!61;UBERON:0003082!1.59e-13!61;UBERON:0005256!5.24e-13!143;UBERON:0000475!5.85e-13!365;UBERON:0002385!1.76e-12!63;UBERON:0001015!1.76e-12!63;UBERON:0000383!1.76e-12!63;UBERON:0000119!3.21e-12!312;UBERON:0002049!9.12e-12!79;UBERON:0007798!9.12e-12!79;UBERON:0000483!1.87e-11!309;UBERON:0002100!1.97e-10!216;UBERON:0004872!3.41e-10!84;UBERON:0000055!2.48e-09!69;UBERON:0003914!6.45e-09!118;UBERON:0001981!1.97e-08!60;UBERON:0007500!1.97e-08!60;UBERON:0004537!1.97e-08!60;UBERON:0006965!1.97e-08!60;UBERON:0004535!2.84e-08!110;UBERON:0000490!3.37e-08!138;UBERON:0001637!4.51e-08!42;UBERON:0003509!4.51e-08!42;UBERON:0004572!4.51e-08!42;UBERON:0001009!8.04e-08!113;UBERON:0000481!1.91e-07!347;UBERON:0002199!2.34e-07!45;UBERON:0002416!2.34e-07!45;UBERON:0000477!5.90e-07!286 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.99e-19,78;UBERON:0002329,1.05e-16,71;UBERON:0003059,1.05e-16,71;UBERON:0007282,1.05e-16,71;UBERON:0004290,1.05e-16,71;UBERON:0009618,1.05e-16,71;UBERON:0003077,1.38e-16,72;UBERON:0007285,1.38e-16,72;UBERON:0007524,1.70e-16,73;UBERON:0000486,3.53e-16,83;UBERON:0001134,7.27e-14,62;UBERON:0002036,7.27e-14,62;UBERON:0003082,7.27e-14,62;UBERON:0002385,8.25e-13,64;UBERON:0001015,8.25e-13,64;UBERON:0000383,8.25e-13,64;UBERON:0000119,1.52e-12,309;UBERON:0003104,5.60e-12,160;UBERON:0009142,5.60e-12,160;UBERON:0000483,9.09e-12,306;UBERON:0002049,1.12e-11,78;UBERON:0007798,1.12e-11,78;UBERON:0005256,1.27e-10,122;UBERON:0000490,1.68e-10,148;UBERON:0004872,4.22e-10,83;UBERON:0000055,3.04e-09,68;UBERON:0002100,7.08e-09,199;UBERON:0003914,1.15e-08,117;UBERON:0007500,2.40e-08,59;UBERON:0001981,2.40e-08,59;UBERON:0004537,2.40e-08,59;UBERON:0006965,2.40e-08,59;UBERON:0004535,3.51e-08,109;UBERON:0001637,4.51e-08,42;UBERON:0003509,4.51e-08,42;UBERON:0004572,4.51e-08,42;UBERON:0002199,7.82e-08,46;UBERON:0002416,7.82e-08,46;UBERON:0001009,9.91e-08,112 | |||
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| |||
|short_description=p1@MPV17 | |||
}} |
Revision as of 02:15, 21 January 2014
Short description: | p1@MPV17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MPV17_5end |
Coexpression cluster: | C1142_Mesenchymal_Fibroblast_Pericytes_Smooth_Renal_Hepatic_Hair |
Association with transcript: | 0bp_to_ENST00000380044, ENST00000399052, ENST00000402722, ENST00000405076, ENST00000426513, ENST00000428910, ENST00000486898, ENST00000489478, ENST00000494436, ENST00000495429, ENST00000497981, NM_002437, uc002rjs.2_5end |
EntrezGene: | MPV17 |
HGNC: | 7224 |
UniProt: | P39210A8MTD3B5MC10G5E9F5C9J473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.73e-20 | 121 |
fibroblast | 2.78e-17 | 76 |
muscle precursor cell | 8.68e-17 | 58 |
myoblast | 8.68e-17 | 58 |
multi-potent skeletal muscle stem cell | 8.68e-17 | 58 |
muscle cell | 3.85e-16 | 55 |
smooth muscle cell | 4.15e-14 | 43 |
smooth muscle myoblast | 4.15e-14 | 43 |
electrically responsive cell | 1.04e-12 | 61 |
electrically active cell | 1.04e-12 | 61 |
multi fate stem cell | 1.24e-11 | 427 |
somatic stem cell | 4.05e-11 | 433 |
embryonic cell | 1.28e-10 | 250 |
vascular associated smooth muscle cell | 6.08e-10 | 32 |
stem cell | 7.59e-10 | 441 |