FFCP PHASE1:Hg19::chr2:20402306..20402318,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C572 | |||
|description=CAGE_peak_at_chr2:20402306..20402318,- | |||
|id=chr2:20402306..20402318,- | |||
|ontology_enrichment_celltype=CL:0000223!1.19e-15!59;CL:0002076!4.69e-15!43;CL:0000066!6.75e-14!254;CL:0002368!2.26e-11!13;CL:0002321!1.01e-08!248;CL:0002202!1.45e-08!9;CL:0002632!1.45e-08!9;CL:0000220!1.77e-08!246;CL:0000244!9.54e-08!4;CL:0000731!9.54e-08!4;CL:0002077!1.43e-07!33;CL:0002159!8.06e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000244;6.56e-45;4!CL:0000731;6.56e-45;4!CL:0002328;2.72e-27;3!CL:0002202;1.98e-20;9!CL:0002632;1.98e-20;9!CL:0002368;2.27e-14;13!CL:0000575;3.02e-11;2!CL:0002076;3.39e-10;42!CL:0002231;4.52e-08;3!CL:0000307;6.34e-08;3!CL:0002623;6.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.10e-45,4;CL:0000731,3.10e-45,4;CL:0002328,1.39e-27,3;CL:0002202,1.73e-20,9;CL:0002632,1.73e-20,9;CL:0002368,2.08e-14,13;CL:0000223,3.03e-12,58;CL:0002076,5.90e-12,42;CL:0000575,3.70e-11,2;CL:0002231,4.52e-08,3;CL:0000068,7.76e-08,3;CL:0000069,7.76e-08,3;CL:0000307,7.76e-08,3;CL:0000377,7.76e-08,3;CL:0002623,8.29e-08,3;CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000223;1.91e-09;58!CL:0000377;6.34e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!8.54e-13!169;UBERON:0000925!8.54e-13!169;UBERON:0006595!8.54e-13!169;UBERON:0005911!1.55e-08!82;UBERON:0001007!1.69e-08!155;UBERON:0001555!1.69e-08!155;UBERON:0007026!1.69e-08!155;UBERON:0007196!7.31e-08!14;UBERON:0001558!7.31e-08!14;UBERON:0000077!8.40e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;4.12e-36;5!UBERON:0005910;3.07e-30;6!UBERON:0004815;2.72e-27;3!UBERON:0002031;2.72e-27;3!UBERON:0002185;8.13e-17;5!UBERON:0000486;1.65e-15;12!UBERON:0007196;1.52e-12;15!UBERON:0001558;1.52e-12;15!UBERON:0000485;2.66e-12;7!UBERON:0005911;6.68e-12;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.26e-36,5;UBERON:0005910,1.86e-30,6;UBERON:0004815,1.39e-27,3;UBERON:0002031,1.39e-27,3;UBERON:0002185,5.45e-17,5;UBERON:0007196,1.41e-12,15;UBERON:0001558,1.41e-12,15;UBERON:0005911,1.04e-11,82;UBERON:0000485,7.08e-10,9;UBERON:0004119,1.45e-09,160;UBERON:0000925,1.45e-09,160;UBERON:0006595,1.45e-09,160;UBERON:0006554,3.63e-07,47;UBERON:0005157,3.75e-07,47;UBERON:0001008,5.05e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0.919421224478927,1.50602959389125,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0.169560592310488,0.57978255948989,0.818238361772504,0,0.121973706129595,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0.171567810298526,0.878002283269004,0,0.603173834469785,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.567100388969546,0.358234090811393,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.348631135379878,0,0.802025881213139,2.67034867914099,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.170453254832202,0,0.661139661443912,0.576570202095319,0,0.4046311234222,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0.48111056362756,0,1.08890984861323,0.282431402330337,1.29151611801369,1.68471475667626,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0.284136146806413,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.568967241427498,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694238953340524,0.0979923974143777,0.0870592065804026,0,0.343972064943233,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0.391102765469606,0.480952921509202,0.213452994739353,0,0,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.247247575143499,0,0.0984274815147488,0,0,0,0,0.275078873194468,0.415440338029185,0,0,0,0.670869375198532,0.236417121897595,0,0,0,0,0,0,0.25426853765475,0.542999601753713,0,0.326587360109409,0,0,0.340776043570843,0.113312091520126,0.439656701034247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0.428883182749851,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0.38582807654183,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03608082081518,0.6828739083758,0,0,0,0,0.846774100381858,0,0,0,0.335566295393377,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.357107877211315,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0.218531143927391,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0.202117188958219,0.435433495793923,0,0.202056159043763,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:20402306..20402318,- | |||
}} |
Revision as of 01:55, 21 January 2014
Short description: | p@chr2:20402306..20402318, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:20402306..20402318, - |
Coexpression cluster: | C572_Urothelial_Prostate_Keratinocyte_Corneal_Mammary_Bronchial_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 3.10e-45 | 4 |
urothelial cell | 3.10e-45 | 4 |
bronchial epithelial cell | 1.39e-27 | 3 |
epithelial cell of tracheobronchial tree | 1.73e-20 | 9 |
epithelial cell of lower respiratory tract | 1.73e-20 | 9 |
respiratory epithelial cell | 2.08e-14 | 13 |
endodermal cell | 3.03e-12 | 58 |
endo-epithelial cell | 5.90e-12 | 42 |
corneal epithelial cell | 3.70e-11 | 2 |
epithelial cell of prostate | 4.52e-08 | 3 |
duct epithelial cell | 7.76e-08 | 3 |
branched duct epithelial cell | 7.76e-08 | 3 |
tracheal epithelial cell | 7.76e-08 | 3 |
tracheoblast | 7.76e-08 | 3 |
acinar cell of salivary gland | 8.29e-08 | 3 |
epithelial cell | 2.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.26e-36 | 5 |
transitional epithelium | 1.86e-30 | 6 |
lower respiratory tract epithelium | 1.39e-27 | 3 |
epithelium of bronchus | 1.39e-27 | 3 |
bronchus | 5.45e-17 | 5 |
tracheobronchial tree | 1.41e-12 | 15 |
lower respiratory tract | 1.41e-12 | 15 |
endo-epithelium | 1.04e-11 | 82 |
simple columnar epithelium | 7.08e-10 | 9 |
endoderm-derived structure | 1.45e-09 | 160 |
endoderm | 1.45e-09 | 160 |
presumptive endoderm | 1.45e-09 | 160 |
urinary system structure | 3.63e-07 | 47 |
epithelial fold | 3.75e-07 | 47 |
renal system | 5.05e-07 | 48 |