FFCP PHASE1:Hg19::chr2:16804320..16804365,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25373 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H0Q0 | |||
|association_with_transcript=0bp_to_ENST00000355549,uc010exm.1_5end | |||
|description=CAGE_peak_4_at_FAM49A_5end | |||
|id=chr2:16804320..16804365,- | |||
|ontology_enrichment_celltype=CL:0000766!2.03e-21!76;CL:0002057!1.65e-19!42;CL:0002009!2.00e-18!65;CL:0000860!1.41e-17!45;CL:0000557!6.96e-17!71;CL:0002194!1.67e-16!63;CL:0000576!1.67e-16!63;CL:0000040!1.67e-16!63;CL:0000559!1.67e-16!63;CL:0000839!1.02e-14!70;CL:0000763!3.65e-12!112;CL:0000049!3.65e-12!112;CL:0000738!3.52e-10!140;CL:0000094!3.31e-09!8;CL:0000188!4.45e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.75e-19;8!CL:0002541;3.08e-14;3!CL:0000775;3.52e-14;3!CL:0000081;7.37e-14;11!CL:0001014;7.54e-10;2!CL:0001016;7.54e-10;2!CL:0000771;9.81e-10;2!CL:0000188;8.51e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.07e-19,8;CL:0002541,2.53e-14,3;CL:0000775,3.30e-14,3;CL:0000081,6.02e-14,11;CL:0001014,5.67e-10,2;CL:0001016,5.67e-10,2;CL:0000766,7.22e-10,72;CL:0000771,9.21e-10,2;CL:0000188,8.22e-08,9;CL:0000763,1.50e-07,108;CL:0000049,1.50e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!1.14e-07!27;DOID:193!7.14e-07!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.00e-15!80;UBERON:0001474!1.34e-14!86;UBERON:0004765!9.76e-14!101;UBERON:0001434!9.76e-14!101;UBERON:0002390!1.14e-13!102;UBERON:0003061!1.14e-13!102;UBERON:0002204!8.46e-13!167;UBERON:0002193!2.50e-11!112;UBERON:0002405!2.15e-09!115;UBERON:0007625!2.91e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.08e-14;3!UBERON:0000920;3.08e-14;3!UBERON:0000488;3.98e-10;4!UBERON:0007625;2.38e-09;11!UBERON:0001801;2.75e-07;14!UBERON:0005631;3.13e-07;10!UBERON:0000158;3.13e-07;10!UBERON:0002203;6.82e-07;6!UBERON:0001768;6.82e-07;6!UBERON:0002200;6.82e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.53e-14,3;UBERON:0003124,1.08e-10,7;UBERON:0000488,3.63e-10,4;UBERON:0007625,2.34e-09,11;UBERON:0005631,7.33e-08,14;UBERON:0000158,7.33e-08,14;UBERON:0001801,2.71e-07,14;UBERON:0002203,6.42e-07,6;UBERON:0001768,6.42e-07,6;UBERON:0002200,6.42e-07,6 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0.672325146451775,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,1.53531759238885,0.464448369948228,0,0,0,0,0,0,0,1.40381113229099,2.38711957787437,0.447830948479849,0,0,0.436194716338694,0.377875943688809,0,0.232429036905685,1.23350366406548,0,0,0,0,2.06847408441971,1.29096936716765,1.35426486594342,0.941211697713023,0.818718450173537,0.224723484445085,0.918251677112708,1.92557416245656,0.639337125799041,0,0.199463657621632,0,0.580418477257168,0.56738522469114,0,0.502497330513487,0,0.868755378820466,2.42159801053347,0.736555271975129,0.316462387440884,0,0.212604299965044,0.838634582033504,1.23561494261145,0.150176892841506,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,1.55210578223795,1.05401742831751,0,0,0,0,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,2.74508496477641,0,0,0,0,0,0,1.44331342025273,0.115930404975077,1.17408694235822,0,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0.502257091432126,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0.128343036279748,0,0,0,0,0,3.74503511973591,2.99161459204025,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.2942852049117,0.213455115606889,0,0,0,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0.262248829918848,0,1.15523005656622,0,0,0.527758144464379,0,0,0.863663664408557,0,0,0,0,0.831076008928724,0,0,0,0,0,0.650756789328606,3.09123034943167,0.0915694648183434,0,0,0,0,1.16004861950546,0.154048617114644,0.921022048356777,2.20538515975249,0.214840489736547,0.435050081742686,2.30111894023472,1.78064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7301702225266,0,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.67121139316383,0,0.921482106297696,0,0,2.11486539543521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0.23056390438806,0.0897576444097721,0.108647371922008,5.74202087517455,1.4655614944298,17.0571128325963,0,0,0,0,0,0,0,0,10.5499032264014,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0.0979923974143777,0,0,0,0,0,0,0,0,0,1.23337732182076,0.19871461170299,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0.135904206073614,0.418411385249333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1238251198175,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0.513260513652988,0,0.213574825135389,0,0.828478110694391,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0.318593534327405,0.449803112163605,0.310525913752519,0,0.265841714557995,0.521745061811734,1.05180326298053,0,0,0.363697318405119,2.36303225493475,0,0,2.00013882331577,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0.578742114812744,0,0.76872455576384,0,0,0,0,0,0,0,3.93236654005951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0341013740704,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,5.85435643073416,0,0,0,0,0.354581522651905,0,0,0,0,0,15.5467865677407,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,1.14553434272025,2.17144469965024,0,0.335566295393377,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@FAM49A | |||
}} |
Revision as of 01:50, 21 January 2014
Short description: | p4@FAM49A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM49A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000355549, uc010exm.1_5end |
EntrezGene: | FAM49A |
HGNC: | 25373 |
UniProt: | Q9H0Q0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 2.07e-19 | 8 |
chorionic membrane mesenchymal stem cell | 2.53e-14 | 3 |
neutrophil | 3.30e-14 | 3 |
blood cell | 6.02e-14 | 11 |
CD1a-positive Langerhans cell | 5.67e-10 | 2 |
immature CD1a-positive Langerhans cell | 5.67e-10 | 2 |
myeloid leukocyte | 7.22e-10 | 72 |
eosinophil | 9.21e-10 | 2 |
cell of skeletal muscle | 8.22e-08 | 9 |
myeloid cell | 1.50e-07 | 108 |
common myeloid progenitor | 1.50e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.53e-14 | 3 |
chorion | 1.08e-10 | 7 |
atypical epithelium | 3.63e-10 | 4 |
pigment epithelium of eye | 2.34e-09 | 11 |
extraembryonic membrane | 7.33e-08 | 14 |
membranous layer | 7.33e-08 | 14 |
anterior segment of eyeball | 2.71e-07 | 14 |
vasculature of eye | 6.42e-07 | 6 |
uvea | 6.42e-07 | 6 |
vasculature of head | 6.42e-07 | 6 |