FFCP PHASE1:Hg19::chr2:16082418..16082429,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4613 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=7559 | |||
|TSSclassifier=weak | |||
|UniProt=Q53XS5 | |||
|association_with_transcript=231bp_to_AB464743,BT007384_5end | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_8_at_MYCN_5end | |||
|id=chr2:16082418..16082429,+ | |||
|ontology_enrichment_celltype=CL:0000047!3.34e-12!8;CL:0000540!9.34e-11!6;CL:0000031!9.34e-11!6;CL:0000404!9.34e-11!6;CL:0002319!6.29e-08!25;CL:0000133!6.69e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000333;6.64e-89;5!CL:0002321;1.81e-30;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,2.75e-11,41;CL:0000133,3.25e-08,59;CL:0000221,6.51e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000221;1.21e-07;72 | |||
|ontology_enrichment_disease=DOID:3095!4.44e-10!22;DOID:2994!4.44e-10!22;DOID:169!7.65e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:169;2.58e-74;6!DOID:171;4.18e-45;10!DOID:3095;3.99e-21;22!DOID:2994;3.99e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.58e-74,6;DOID:171,4.18e-45,10;DOID:3095,3.99e-21,22;DOID:2994,3.99e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.79e-16!94;UBERON:0001016!1.79e-16!94;UBERON:0001017!2.23e-14!82;UBERON:0004733!4.23e-14!12;UBERON:0002028!4.23e-14!12;UBERON:0007277!4.23e-14!12;UBERON:0005743!1.70e-13!86;UBERON:0004732!6.09e-13!13;UBERON:0000988!1.46e-11!3;UBERON:0002298!2.46e-11!8;UBERON:0003076!4.35e-11!15;UBERON:0003057!4.35e-11!15;UBERON:0002680!5.85e-10!9;UBERON:0001895!5.85e-10!9;UBERON:0010092!5.85e-10!9;UBERON:0004121!1.83e-08!169;UBERON:0002148!1.93e-08!2;UBERON:0009662!1.93e-08!2;UBERON:0003075!3.45e-08!86;UBERON:0007284!3.45e-08!86;UBERON:0000955!3.68e-08!69;UBERON:0006238!3.68e-08!69;UBERON:0000013!3.79e-08!5;UBERON:0002410!3.79e-08!5;UBERON:0000924!3.86e-08!173;UBERON:0006601!3.86e-08!173;UBERON:0001049!9.34e-08!57;UBERON:0005068!9.34e-08!57;UBERON:0006241!9.34e-08!57;UBERON:0007135!9.34e-08!57;UBERON:0002346!1.14e-07!90;UBERON:0002616!2.07e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;6.64e-89;5!UBERON:0002410;6.64e-89;5!UBERON:0000010;5.60e-50;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,6.64e-89,5;UBERON:0002410,6.64e-89,5;UBERON:0000010,5.60e-50,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0.46112780877612,0.179515288819544,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.7530785728924,4.85211651285068,0,41.2812432365813,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.131545547125698,0,0,0,0,0,0,0,0,0,0.94808167039636,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@MYCN | |||
}} |
Revision as of 01:49, 21 January 2014
Short description: | p8@MYCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MYCN_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 231bp_to_AB464743, BT007384_5end |
EntrezGene: | MYCN |
HGNC: | 7559 |
UniProt: | Q53XS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 2.75e-11 | 41 |
neurectodermal cell | 3.25e-08 | 59 |
ectodermal cell | 6.51e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 6.64e-89 | 5 |
autonomic nervous system | 6.64e-89 | 5 |
peripheral nervous system | 5.60e-50 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.58e-74 | 6 |
neuroectodermal tumor | 4.18e-45 | 10 |
germ cell and embryonal cancer | 3.99e-21 | 22 |
germ cell cancer | 3.99e-21 | 22 |