FFCP PHASE1:Hg19::chr19:54876483..54876501,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3903 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6477 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-6bp_to_ENST00000391741_5end | |||
|coexpression_cluster_id=C1105 | |||
|description=CAGE_peak_2_at_LAIR1_5end | |||
|id=chr19:54876483..54876501,- | |||
|ontology_enrichment_celltype=CL:0000037!1.90e-68!172;CL:0000566!1.90e-68!172;CL:0002032!1.89e-63!165;CL:0000837!1.89e-63!165;CL:0000988!1.93e-63!182;CL:0000738!2.64e-59!140;CL:0002031!1.28e-52!124;CL:0002087!1.20e-51!119;CL:0000763!3.31e-45!112;CL:0000049!3.31e-45!112;CL:0000766!7.22e-42!76;CL:0000839!3.84e-38!70;CL:0000557!2.68e-37!71;CL:0002194!3.42e-34!63;CL:0000576!3.42e-34!63;CL:0000040!3.42e-34!63;CL:0000559!3.42e-34!63;CL:0002009!4.25e-33!65;CL:0002057!3.18e-32!42;CL:0000860!1.42e-28!45;CL:0000542!2.52e-15!53;CL:0000051!2.52e-15!53;CL:0000838!5.19e-15!52;CL:0000134!1.97e-10!358;CL:0000084!1.38e-09!25;CL:0000827!1.38e-09!25;CL:0002320!2.17e-09!365;CL:0000791!3.00e-09!18;CL:0000789!3.00e-09!18;CL:0002420!3.00e-09!18;CL:0002419!3.00e-09!18;CL:0000790!3.00e-09!18;CL:0000236!3.44e-08!14;CL:0002393!1.49e-07!9;CL:0002397!1.49e-07!9;CL:0000625!5.86e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.44e-26;33!CL:0002057;7.44e-26;33!CL:0000473;3.14e-25;39!CL:0000234;3.14e-25;39!CL:0000576;1.14e-24;48!CL:0000766;6.01e-22;69!CL:0000763;2.54e-17;100!CL:0002087;3.42e-16;104!CL:0000738;5.66e-14;136!CL:0000988;1.34e-11;177!CL:0000791;5.77e-10;18!CL:0000789;5.77e-10;18!CL:0002419;5.77e-10;18!CL:0000084;8.90e-10;25!CL:0000542;2.40e-09;53!CL:0000236;4.79e-09;13!CL:0000625;1.92e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.66e-74,168;CL:0002032,4.72e-69,161;CL:0000837,4.72e-69,161;CL:0000988,1.05e-67,177;CL:0000738,4.24e-65,136;CL:0002031,1.70e-58,120;CL:0002087,3.13e-58,115;CL:0000763,3.26e-51,108;CL:0000049,3.26e-51,108;CL:0000766,2.16e-50,72;CL:0000839,2.67e-46,66;CL:0000557,2.06e-44,67;CL:0002194,5.36e-42,59;CL:0000576,5.36e-42,59;CL:0000040,5.36e-42,59;CL:0000559,5.36e-42,59;CL:0002009,9.56e-40,61;CL:0000473,1.97e-39,48;CL:0000234,1.97e-39,48;CL:0000860,5.16e-35,42;CL:0002057,5.16e-35,42;CL:0000542,3.61e-15,53;CL:0000051,3.61e-15,53;CL:0000838,7.89e-15,52;CL:0000134,1.54e-10,354;CL:0000791,6.04e-10,18;CL:0000789,6.04e-10,18;CL:0002420,6.04e-10,18;CL:0002419,6.04e-10,18;CL:0000790,6.04e-10,18;CL:0000084,9.24e-10,25;CL:0000827,9.24e-10,25;CL:0002320,1.40e-09,361;CL:0002393,4.27e-08,9;CL:0002397,4.27e-08,9;CL:0000236,4.52e-08,14;CL:0000625,1.89e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;3.00e-25;42!CL:0000049;1.23e-14;108!CL:0000790;5.77e-10;18!CL:0000051;2.40e-09;53 | |||
|ontology_enrichment_disease=DOID:1240!1.53e-09!39;DOID:8692!8.96e-08!31;DOID:2531!2.83e-07!51;DOID:0060083!2.83e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.04e-07;31!DOID:1240;1.36e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.66e-09,39;DOID:8692,4.51e-08,31;DOID:2531,4.24e-07,51;DOID:0060083,4.24e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.70e-42!102;UBERON:0003061!6.70e-42!102;UBERON:0002193!5.84e-37!112;UBERON:0002371!2.34e-32!80;UBERON:0007023!2.74e-30!115;UBERON:0001474!1.09e-28!86;UBERON:0002405!4.96e-25!115;UBERON:0004765!2.77e-21!101;UBERON:0001434!2.77e-21!101;UBERON:0001049!6.65e-10!57;UBERON:0005068!6.65e-10!57;UBERON:0006241!6.65e-10!57;UBERON:0007135!6.65e-10!57;UBERON:0002384!1.47e-08!375;UBERON:0003081!3.15e-08!216;UBERON:0003080!3.66e-08!42;UBERON:0002780!4.82e-08!41;UBERON:0001890!4.82e-08!41;UBERON:0006240!4.82e-08!41;UBERON:0000178!9.75e-08!15;UBERON:0000179!9.75e-08!15;UBERON:0000463!9.75e-08!15;UBERON:0002616!2.99e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.76e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-46,98;UBERON:0003061,1.02e-46,98;UBERON:0002193,1.46e-41,108;UBERON:0002371,8.47e-39,76;UBERON:0002405,4.22e-36,93;UBERON:0001474,8.19e-34,82;UBERON:0007023,8.41e-29,114;UBERON:0004765,2.81e-28,90;UBERON:0001434,1.80e-23,100;UBERON:0003081,1.19e-11,203;UBERON:0001049,2.45e-10,56;UBERON:0005068,2.45e-10,56;UBERON:0006241,2.45e-10,56;UBERON:0007135,2.45e-10,56;UBERON:0000073,2.13e-09,53;UBERON:0002616,2.13e-09,53;UBERON:0002384,1.18e-08,371;UBERON:0002780,2.60e-08,41;UBERON:0001890,2.60e-08,41;UBERON:0003080,2.60e-08,41;UBERON:0006240,2.60e-08,41;UBERON:0003528,7.04e-07,34;UBERON:0002020,7.04e-07,34 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,2.53299878168311,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,1.29902789771517,1.14940825229924,1.73163718890094,52.7108130977531,15.3531759238885,23.9964991139918,0,0,0,0,0,41.6912623855483,36.009701554572,35.4963672022151,16.9268479158364,63.3680792098986,53.1185612271126,70.0605543964987,46.6728346482403,61.2159028775871,67.9235371325885,92.7391857253682,68.6650372996449,53.888908535748,29.0569316245372,45.852766468709,35.2358522533992,92.3918424374138,53.5752287374576,47.3992703080196,49.507735299705,42.0275471089083,53.7089127823752,155.796701216789,108.153082124644,106.76930000844,25.0686988141904,41.8873681005427,46.4584978080637,143.943782359778,84.5403984789798,92.8005151003407,20.6023905510529,22.4237654920687,24.7595282963833,99.2855184318725,71.0775837456,93.6728666825018,44.7861206981317,48.686384691995,37.1095802549825,27.9698291554773,23.427595283275,20.2514239238321,50.1622428984597,39.9822521170171,35.436845830339,70.3984977845291,50.7908908473782,73.829268070675,59.3155009367445,64.864149899834,60.3490061952207,64.1213526601316,63.9216015538694,19.9224539188307,12.3319809767897,11.0859236156316,22.4691258584344,22.4203425192614,28.1820970709332,7.67168103443949,6.28817220398664,4.31763147898969,35.6107235182144,23.7923254642521,17.5175688121851,17.534405556712,32.4204429535855,13.2572658363677,7.75368631042674,13.2693893244858,41.2454049516674,43.4398220849993,44.3982342429926,62.7314540373876,39.9928258314372,26.6915813691709,18.9953987943696,18.8163942848958,29.8003571294599,4.59864592322305,10.6524508099615,10.1207876807801,28.0337564605205,20.8346705234054,22.810849066761,15.2080870268551,19.4539648954716,27.4847598415161,31.9649290259423,16.4225599384209,11.4915843638097,5.61624411145365,11.7307767145067,0,0,0,0,0,0,0,0,0,0,0.087834785693126,3.79839318943367,0,0,3.24547393654683,1.39303789839414,3.58986493400936,16.4558530770686,33.7476997360275,17.8299600638191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,15.511210565933,0,0,0,0,0,1.77334191099179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,12.8024298830249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.690439302703,13.3382431129365,33.4420115149639,0,0,0,0,0,0,9.36060152002293,47.898348103195,46.0268416500514,85.1748924694242,63.4999440134691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.5683232244167,47.714423686052,27.4084121327941,0,0,0,0,0,0,3.47463946379935,23.0525989436255,20.2689920367946,20.5348858047597,0,0,0,0.837581326671744,0,6.74106321552464,11.966458368161,4.97298616123243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3986270825007,35.5928431350718,21.6656942340992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28889814968902,2.3529190592241,0,0,0,5.04900957073839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,4.0481834334015,0,0,0,0,19.7904567600546,16.0573813499899,33.0395368561014,26.4437270758146,32.4976195738093,9.72709966789076,14.040817368191,26.1731308177109,0,0,0,5.38829207864584,7.79053750072802,13.9438012962892,15.4643484546958,7.58401611444703,29.1088162601197,87.2095160822397,47.0701813398105,17.128627864921,12.7811420258588,12.2210318702958,7.51903431270201,12.8661751129218,14.1317506091256,20.5835701334869,24.6990817860389,23.7018687881478,11.0606675151045,17.4467364156084,13.6816296203765,13.6771666781428,0,0,5.95002492647163,2.33150377598474,4.22961015263549,0,8.05794985995417,0,0.334330152832435,0,0,0.890894042497916,0,4.97073823883149,6.47079315488359,0,12.1954866927802,0,3.78571177677032,11.3276405367771,0,0,0,0,0,0,33.2522040647467,2.56472854656027,16.7638164642858,0,2.90799823828566,4.26733251544516,1.99613798001194,0,0,1.44999915086959,0,0,0,0,0,0,4.42870692906919,4.46206822914009,1.52581736317083,1.54810963903714,1.47773809476774,1.09692698576986,0,0,3.23191085715948,0.91153644677601,0,0,0,0.957003479195758,0.274792780205587,2.66517388009317,49.0527831339535,13.6572823063672,2.16075186470203,0,0,0,0,3.81447789552909,0,0,0,0,5.97157158647103,5.30745387020035,3.66618086960175,0.593042257361244,0.741383633679017,0.730953646538188,9.57096088325614,1.60515529459758,4.2167600230561,0,0,0,1.57833761139756,2.41981432097328,0.61214552326098,17.2499362385772,0,0,0,0,0,0,0,0,0,0,0,6.29016005671309,0,0,0,0,0.969890164884194,0,0.90392296312213,0,0,2.53243183823515,0,0,3.41524791582964,0,0,0,0,0,0,0,0,0,0.101998217636322,0,3.00210144354895,10.8155249324675,21.7169199713853,0,0,2.23425921017803,2.06244381610515,2.87149209830726,0.998395002494955,0.858452096273142,2.23171457441873,1.74677028465488,0,0,0.315132729228895,0.0824158583811665,0.202210631562555,0,0,4.77137813885582,6.81017030557878,0,0,0,0.2249738915515,0,3.03747783290123,0,2.60058834087354,1.4162738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| |||
|short_description=p2@LAIR1 | |||
}} |
Revision as of 01:04, 21 January 2014
Short description: | p2@LAIR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LAIR1_5end |
Coexpression cluster: | C1105_CD14_CD19_acute_CD14CD16_CD4_Mast_granulocyte |
Association with transcript: | -6bp_to_ENST00000391741_5end |
EntrezGene: | LAIR1 |
HGNC: | 6477 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.02e-46 | 98 |
blood island | 1.02e-46 | 98 |
hemolymphoid system | 1.46e-41 | 108 |
bone marrow | 8.47e-39 | 76 |
immune system | 4.22e-36 | 93 |
bone element | 8.19e-34 | 82 |
adult organism | 8.41e-29 | 114 |
skeletal element | 2.81e-28 | 90 |
skeletal system | 1.80e-23 | 100 |
lateral plate mesoderm | 1.19e-11 | 203 |
neural tube | 2.45e-10 | 56 |
neural rod | 2.45e-10 | 56 |
future spinal cord | 2.45e-10 | 56 |
neural keel | 2.45e-10 | 56 |
regional part of nervous system | 2.13e-09 | 53 |
regional part of brain | 2.13e-09 | 53 |
connective tissue | 1.18e-08 | 371 |
regional part of forebrain | 2.60e-08 | 41 |
forebrain | 2.60e-08 | 41 |
anterior neural tube | 2.60e-08 | 41 |
future forebrain | 2.60e-08 | 41 |
brain grey matter | 7.04e-07 | 34 |
gray matter | 7.04e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.66e-09 | 39 |
myeloid leukemia | 4.51e-08 | 31 |
hematologic cancer | 4.24e-07 | 51 |
immune system cancer | 4.24e-07 | 51 |