FFCP PHASE1:Hg19::chr19:50435673..50435690,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=790 | |||
|TSSclassifier=not | |||
|UniProt=Q9Y2D1 | |||
|association_with_transcript=-299bp_to_AF101388_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_8_at_ATF5_5end | |||
|id=chr19:50435673..50435690,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.92e-09;12!CL:0002570;4.91e-09;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.34e-09,12;CL:0002570,8.45e-09,8;CL:0000214,6.76e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.93e-11;19!UBERON:0006925;3.93e-11;19!UBERON:0002423;3.24e-08;25!UBERON:0004457;5.27e-08;9!UBERON:0000042;5.27e-08;9!UBERON:0001013;1.17e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.70e-11,19;UBERON:0006925,4.70e-11,19;UBERON:0008836,4.70e-11,19;UBERON:0008835,2.08e-09,22;UBERON:0003894,2.08e-09,22;UBERON:0009854,5.90e-09,23;UBERON:0007499,3.69e-08,25;UBERON:0009497,3.69e-08,25;UBERON:0000015,3.69e-08,25;UBERON:0002423,3.69e-08,25;UBERON:0006235,3.69e-08,25;UBERON:0004161,3.69e-08,25;UBERON:0009856,8.31e-08,26;UBERON:0001013,1.57e-07,14;UBERON:0002417,5.89e-07,60;UBERON:0000916,5.89e-07,60;UBERON:0006915,6.76e-07,3;UBERON:0007616,6.76e-07,3;UBERON:0002217,6.76e-07,3;UBERON:0002018,6.76e-07,3 | |||
|phase1_expression=0.908391896352783,1.71280419112787,0.845726424575827,0,2.23480547213644,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0.136874425072884,0,0.458480434487708,0.985207073399349,1.02324015707783,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0.145398238779565,0,0.727752183563449,0.232429036905685,0.411167888021826,0,0.863077176966451,0.512321413058201,0.47296445977717,0,1.29096936716765,0,0.564727018627814,1.91034305040492,0,2.44867113896722,0.320929027076094,0,0.659702600373432,0.199463657621632,0,1.16083695451434,0.56738522469114,0.622822248995575,0.75374599577023,1.5644487552606,0.217188844705117,1.21079900526674,0,0,0.422510572623884,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.351339142772504,0.0654895377488563,0,0,0,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0.436094052142534,0.993943903390637,0.633152558322899,0.132409180813219,0.573673241497627,1.06400514659507,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0.298897361103602,0.117434498643765,0,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0.250237039743928,0.277064115484183,0,0,0,0,0,0.640672166455702,0.211931901159562,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0.286804595389004,0.365921118388786,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0.241011029883482,0.220587945464788,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,32.956309053676,23.587853200263,12.4065880403095,0,0.122988438543114,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.492434012174795,0,0.148631162288728,0,0.16798212819886,0.283550194484773,0,0,0,0.492663237895943,0.088048434013226,0,0,0,0,0.763976851116555,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0.1466765716419,0.129271715757778,3.57656445851882,0,0.531876233169741,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0,0.215627574859517,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0.117141414992713,0.300946099727719,0,2.0694614258501,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0.306923946576125,1.40330047216537,0.512556597022804,0,1.44768529029247,1.48418066444991,0.308419387605311,0,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0.229628896329213,0.546273504020151,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0.170093705276516,0.215915916102139,1.54227252690289,0,0,0,0,0,0.219259876645935,0,0,0,0,0.515205058238611,0.0915694648183434,0,0.574265537996172,0,0,0.676695028044854,0.308097234229289,0.15350367472613,0.275673144969061,0.429680979473094,0.145016693914229,0,0.534192213880424,0,0,0,0.10115778085555,0.929691098594572,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0.731140468893853,0,0,1.55545975149084,0,0,0,0.876901770507525,0,0.655894752046633,0.202910376962704,0,0,0.143411352204052,0,0.35667105148125,0,1.47775344708365,1.64647446479951,0,0,0,0,0,1.22386941009813,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0.929015875628594,0.144269212976445,0.853702120180969,0,0,0.191505370132367,1.2700414963433,0,0.280797178113459,0,0.783399478865116,0,0,0,0,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0.540911356951966,0.33307196799782,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0,0.824019371133798,0,0,0,0.251932747854276,0,0.615424027305347,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.1137934482855,0,0.472775363535873,0.689486746482929,0.583209226766509,1.56262495439963,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0.113942055847001,0.46112780877612,0.0897576444097721,0.434589487688032,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0,0.225595660617181,0.19606253431774,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0.247127877893006,0,0,0,0,2.18945747058799,0.19566461893209,0,0.394584402849391,0,0,0.063186579628488,0,0.207376382794494,0.664653872707185,0.330991955875499,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0.171986032471617,0.0967563312890851,0.292357268344742,0.0821154570532092,0.0969890164884194,0.264768380074501,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0.864542502924636,0,3.94668495082519,0,0.49701014226173,0,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0.429765441419957,0.525774708558629,0,0.458320848023367,0,0,0.429226048136571,0,0,0,0,0.0787831823072236,0.164831716762333,0.13480708770837,1.08270229666224,0.254019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| |||
|short_description=p8@ATF5 | |||
}} |
Revision as of 00:36, 21 January 2014
Short description: | p8@ATF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ATF5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -299bp_to_AF101388_5end |
EntrezGene: | ATF5 |
HGNC: | 790 |
UniProt: | Q9Y2D1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.34e-09 | 12 |
mesenchymal stem cell of adipose | 8.45e-09 | 8 |
synovial cell | 6.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 4.70e-11 | 19 |
digestive gland | 4.70e-11 | 19 |
liver bud | 4.70e-11 | 19 |
hepatic diverticulum | 2.08e-09 | 22 |
liver primordium | 2.08e-09 | 22 |
digestive tract diverticulum | 5.90e-09 | 23 |
epithelial sac | 3.69e-08 | 25 |
epithelium of foregut-midgut junction | 3.69e-08 | 25 |
anatomical boundary | 3.69e-08 | 25 |
hepatobiliary system | 3.69e-08 | 25 |
foregut-midgut junction | 3.69e-08 | 25 |
septum transversum | 3.69e-08 | 25 |
sac | 8.31e-08 | 26 |
adipose tissue | 1.57e-07 | 14 |
abdominal segment of trunk | 5.89e-07 | 60 |
abdomen | 5.89e-07 | 60 |
stratified squamous epithelium | 6.76e-07 | 3 |
layer of synovial tissue | 6.76e-07 | 3 |
synovial joint | 6.76e-07 | 3 |
synovial membrane of synovial joint | 6.76e-07 | 3 |