FFCP PHASE1:Hg19::chr19:48245317..48245328,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt=B7Z732 | |||
|association_with_transcript=169bp_to_AK301380_5end | |||
|coexpression_cluster_id=C764 | |||
|description=CAGE_peak_6_at_AK301380_5end | |||
|id=chr19:48245317..48245328,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.50e-26!180;CL:0000057!1.33e-17!75;CL:0000222!3.51e-16!119;CL:0000183!3.82e-15!59;CL:0000680!3.23e-13!57;CL:0000056!3.23e-13!57;CL:0000355!3.23e-13!57;CL:0000187!4.21e-13!54;CL:0000192!1.40e-11!42;CL:0000514!1.40e-11!42;CL:0000220!1.05e-10!246;CL:0002321!1.34e-10!248;CL:0000393!5.08e-10!60;CL:0000211!5.08e-10!60;CL:0000359!1.71e-08!32;CL:0002620!2.55e-08!23;CL:0002334!2.45e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.60e-11;12!CL:0000192;3.73e-08;43!CL:0002620;5.85e-08;23!CL:0000359;4.20e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.88e-18,76;CL:0002334,6.02e-11,12;CL:0000192,6.22e-11,43;CL:0000514,6.22e-11,43;CL:0000187,9.98e-11,55;CL:0000680,2.47e-10,58;CL:0000056,2.47e-10,58;CL:0000355,2.47e-10,58;CL:0000393,9.54e-09,61;CL:0000211,9.54e-09,61;CL:0000222,1.12e-08,121;CL:0000723,3.81e-08,433;CL:0000048,1.22e-07,427;CL:0002620,1.88e-07,23;CL:0000034,1.92e-07,441;CL:0000359,4.74e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;3.73e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.49e-15!84;UBERON:0000914!2.26e-15!83;UBERON:0002329!2.26e-15!83;UBERON:0003077!2.26e-15!83;UBERON:0003059!2.26e-15!83;UBERON:0007282!2.26e-15!83;UBERON:0009618!2.26e-15!83;UBERON:0007285!2.26e-15!83;UBERON:0000486!2.22e-14!82;UBERON:0005256!2.88e-14!143;UBERON:0002049!3.43e-14!79;UBERON:0007798!3.43e-14!79;UBERON:0004290!1.51e-13!70;UBERON:0002385!2.19e-13!63;UBERON:0001015!2.19e-13!63;UBERON:0000383!2.19e-13!63;UBERON:0001134!2.60e-13!61;UBERON:0002036!2.60e-13!61;UBERON:0003082!2.60e-13!61;UBERON:0000055!6.76e-13!69;UBERON:0002100!5.10e-12!216;UBERON:0000475!7.28e-12!365;UBERON:0001981!9.47e-12!60;UBERON:0007500!9.47e-12!60;UBERON:0004537!9.47e-12!60;UBERON:0006965!9.47e-12!60;UBERON:0003102!1.33e-11!95;UBERON:0001009!5.91e-11!113;UBERON:0003914!7.38e-11!118;UBERON:0004535!8.35e-11!110;UBERON:0001637!3.98e-10!42;UBERON:0003509!3.98e-10!42;UBERON:0004572!3.98e-10!42;UBERON:0000477!2.06e-09!286;UBERON:0000490!5.55e-09!138;UBERON:0000119!9.36e-09!312;UBERON:0002199!1.21e-08!45;UBERON:0002416!1.21e-08!45;UBERON:0000483!1.31e-08!309;UBERON:0003104!5.96e-08!238;UBERON:0009142!5.96e-08!238;UBERON:0002097!1.06e-07!40;UBERON:0004573!1.16e-07!33;UBERON:0004571!1.16e-07!33;UBERON:0000481!1.60e-07!347;UBERON:0000468!5.37e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;1.53e-07;46!UBERON:0002416;1.53e-07;46!UBERON:0004457;4.68e-07;9!UBERON:0000042;4.68e-07;9!UBERON:0002097;6.21e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.45e-12,78;UBERON:0002385,8.13e-11,64;UBERON:0001015,8.13e-11,64;UBERON:0000383,8.13e-11,64;UBERON:0001134,8.96e-11,62;UBERON:0002036,8.96e-11,62;UBERON:0003082,8.96e-11,62;UBERON:0002329,2.74e-10,71;UBERON:0003059,2.74e-10,71;UBERON:0007282,2.74e-10,71;UBERON:0004290,2.74e-10,71;UBERON:0009618,2.74e-10,71;UBERON:0000486,3.55e-10,83;UBERON:0003077,5.40e-10,72;UBERON:0007285,5.40e-10,72;UBERON:0007524,1.04e-09,73;UBERON:0005256,2.37e-09,122;UBERON:0002199,2.62e-09,46;UBERON:0002416,2.62e-09,46;UBERON:0000055,3.56e-09,68;UBERON:0004872,4.47e-09,83;UBERON:0001637,7.69e-09,42;UBERON:0003509,7.69e-09,42;UBERON:0004572,7.69e-09,42;UBERON:0007500,1.05e-08,59;UBERON:0001981,1.05e-08,59;UBERON:0004537,1.05e-08,59;UBERON:0006965,1.05e-08,59;UBERON:0002049,1.10e-08,78;UBERON:0007798,1.10e-08,78;UBERON:0003102,1.28e-08,99;UBERON:0003104,1.87e-08,160;UBERON:0009142,1.87e-08,160;UBERON:0002097,1.33e-07,41;UBERON:0002100,4.45e-07,199;UBERON:0003914,5.63e-07,117;UBERON:0004573,7.14e-07,33;UBERON:0004571,7.14e-07,33;UBERON:0000490,7.28e-07,148 | |||
|phase1_expression=1.63510541343501,5.56661362116556,1.26858963686374,3.00219895059391,4.02264984984559,2.61701557230111,0,1.26343974685366,1.56711376919903,1.22866968250754,4.18680700783456,0.218441372130172,0.263766978228454,1.48519623552056,2.31978163009541,2.01697543935533,2.41077811209591,2.19093027116212,2.92759679274304,0.738726348460727,1.83600622119828,0.940364164434263,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,1.50602959389125,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.68280343881454,0.767175371061182,9.39741796199872,1.50401373190767,3.0417768981773,0,2.91980922181582,0.189069634328136,0.221729397462564,0.087834785693126,0.130979075497713,1.09288586487763,0.741568885568859,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.694281003215189,0,2.51699661725944,2.20094433552054,0.835979866147242,0.775250277507987,0.35576626268671,1.33888245105868,3.62546385398232,0.760272105718513,2.4406205754817,1.83831540172934,0,0.803697554556718,0.44905874525234,0.450445921933289,0,0,0.549605231791222,0,0,0.872188104285069,2.48485975847659,1.01304409331664,1.05927344650575,1.43418310374407,2.4826786753885,0.560677600142307,1.06748995729705,1.48000529050296,0.622422070799533,0.269421344139376,0.817309515567294,1.66493170409425,1.72852777344,0.234321431833797,1.5608003841516,0.570471821544449,2.39117888882882,0.587172493218824,0.971237666208789,0.421352420106746,0.816616685019573,0.859840221182376,1.23990937410919,0,1.97813543422845,2.73048408581408,1.43723628363248,0.336672227908132,0.625592599359821,0.831192346452549,0.877955241761676,1.5324389789951,1.35214253015937,0.340296549480063,6.63741652048789,1.49490172172997,2.11931901159562,1.20036438433761,1.23663035086127,4.63752972082133,2.41951913231067,2.19409231913646,1.16924406193438,4.29137416214995,0.828449087780694,0.484938170456436,4.61512470271599,1.10827308050404,1.18692414617341,0.773043412653187,0.545492241181669,0.860413786167011,0.121973706129595,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,1.28648187638577,0,0.928735856063958,1.44375896333917,0.473227200159376,0.505754070234305,0.482022059766964,0.661763836394364,0.217879444092406,0.71181185733329,0.269662616320329,0.98110732562673,0.38474715694639,2.21446636387394,1.40241773803446,1.2347220339942,0,0,0,0,0,0,1.71567810298526,1.86575485194663,1.1240175325762,0.804231779293047,1.75918045801206,0,2.07986957055916,0,0.34779121492523,0.352226082707465,0.433099343283221,2.31492756288305,0.570762456703795,0,0,0,0,0,0,1.17587489739202,0.992425680696705,0.626909658919938,0,0.766765358330422,0,0,0,0,0.12624243342638,0.126995788584338,0.763976851116555,1.17217447210047,1.71072446022705,0.205654985406647,0.600686115687835,0,0.560655421726804,0.43596006883328,0.2933531432838,0.387815147273333,14.3062578340753,1.690605505112,1.06375246633948,3.12022310734098,0.771622122786426,2.83698264046557,1.8649552531127,1.42977993658148,3.7983512377401,0,0.65147236858747,0.710783897485092,0,0.301439377059586,0,0.699810938274399,0,0,0,2.15662369942424,9.18895486672911,0,0.434343920002738,1.02738161275192,0.358121926479791,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,2.69921281782108,3.00102312635806,1.35632511849868,6.23912584592421,7.13715955188647,7.41201350659493,3.16281820480326,1.20378439891088,2.27407504055985,0,1.32845119707087,1.29058417979192,1.56390506042549,2.15381273209015,1.71571711905428,0,0,0,0.909382714338778,3.32870879020994,0.604780586659361,1.48864684691266,2.30192959932094,3.08726103876381,2.05022638809122,1.02341449813341,3.05622450172854,1.48418066444991,2.46735510084249,2.13074070375753,1.64254312027618,4.15403543346897,2.44041794765914,0.120859449591622,1.40354529212299,1.28913384510255,0.459257792658427,2.00300284807389,2.22911505431021,0,0.308061348417659,1.56869953835371,0,0.316654886678627,3.4120015221269,2.55140557914773,1.29549549661284,0,0.812839312631559,2.50844886927427,0.509752546090077,0,0.895499018888713,0,0,0.256450125116389,0,1.30151357865721,0.103041011647722,0.183138929636687,0,2.29706215198469,3.25030123018261,8.03419649220798,0.870036464629098,0.462145851343933,1.07452572308291,0.137836572484531,0.644521469209642,0.870100163485371,1.19317278382541,1.4245125703478,0.330569830721956,0.576570202095319,0.638063562472921,1.6185244936888,6.04299214086472,3.46293581513704,1.3940745403212,0.924100740528266,0.532306030317022,0.869932992075073,0.9266210955196,0,0.372158369359667,0.632758849437452,0.38126038784765,1.27948895655667,5.56320684444097,0.636406495851874,3.13979456079692,0.359744915166629,1.64722217841633,0.589062011728432,0.808729926293264,0,1.26377536871694,2.92580243453754,1.46228093778771,1.05650146756755,3.41249778519964,3.67654123079653,1.13008116620243,1.65409603063837,1.32687795048244,1.75380354101505,1.73632660280006,2.62357900818653,1.0145518848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| |||
|short_description=p6@AK301380 | |||
}} |
Revision as of 00:13, 21 January 2014
Short description: | p6@AK301380 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AK301380_5end |
Coexpression cluster: | C764_Olfactory_Mesenchymal_Synoviocyte_Adipocyte_tenocyte_Chondrocyte_Multipotent |
Association with transcript: | 169bp_to_AK301380_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.88e-18 | 76 |
preadipocyte | 6.02e-11 | 12 |
smooth muscle cell | 6.22e-11 | 43 |
smooth muscle myoblast | 6.22e-11 | 43 |
muscle cell | 9.98e-11 | 55 |
muscle precursor cell | 2.47e-10 | 58 |
myoblast | 2.47e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.47e-10 | 58 |
electrically responsive cell | 9.54e-09 | 61 |
electrically active cell | 9.54e-09 | 61 |
mesodermal cell | 1.12e-08 | 121 |
somatic stem cell | 3.81e-08 | 433 |
multi fate stem cell | 1.22e-07 | 427 |
skin fibroblast | 1.88e-07 | 23 |
stem cell | 1.92e-07 | 441 |
vascular associated smooth muscle cell | 4.74e-07 | 32 |