FFCP PHASE1:Hg19::chr19:46196136..46196138,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3803 | |||
|description=CAGE_peak_at_chr19:46196136..46196138,- | |||
|id=chr19:46196136..46196138,- | |||
|ontology_enrichment_celltype=CL:0000738!7.97e-51!140;CL:0000037!1.56e-45!172;CL:0000566!1.56e-45!172;CL:0000988!7.91e-43!182;CL:0002032!1.71e-39!165;CL:0000837!1.71e-39!165;CL:0002031!7.34e-39!124;CL:0002087!2.11e-35!119;CL:0002057!2.95e-33!42;CL:0000766!1.52e-31!76;CL:0000860!2.87e-30!45;CL:0000557!3.31e-29!71;CL:0000763!1.25e-26!112;CL:0000049!1.25e-26!112;CL:0000839!1.35e-24!70;CL:0002009!3.63e-23!65;CL:0002194!6.51e-21!63;CL:0000576!6.51e-21!63;CL:0000040!6.51e-21!63;CL:0000559!6.51e-21!63;CL:0000134!1.03e-16!358;CL:0002320!1.92e-16!365;CL:0000219!3.47e-15!390;CL:0002393!3.95e-13!9;CL:0002397!3.95e-13!9;CL:0000791!2.00e-12!18;CL:0000789!2.00e-12!18;CL:0002420!2.00e-12!18;CL:0002419!2.00e-12!18;CL:0000790!2.00e-12!18;CL:0000084!4.70e-12!25;CL:0000827!4.70e-12!25;CL:0000838!7.80e-12!52;CL:0000542!1.79e-11!53;CL:0000051!1.79e-11!53;CL:0000624!1.74e-10!6;CL:0000034!4.13e-10!444;CL:0000048!1.29e-09!430;CL:0000723!3.77e-09!436;CL:0000094!1.51e-07!8;CL:0002274!1.84e-07!5;CL:0000457!1.84e-07!5;CL:0002191!1.84e-07!5;CL:0000097!1.84e-07!5;CL:0000831!1.84e-07!5;CL:0002028!1.84e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.45e-20;6!CL:0000791;1.09e-16;18!CL:0000789;1.09e-16;18!CL:0002419;1.09e-16;18!CL:0000094;4.70e-15;8!CL:0000898;8.17e-12;3!CL:0000084;1.90e-11;25!CL:0000623;3.71e-11;3!CL:0000767;6.73e-11;3!CL:0000081;9.37e-11;11!CL:0000784;9.74e-11;3!CL:0000766;1.18e-10;69!CL:0000226;1.38e-10;3!CL:0000842;1.38e-10;3!CL:0002087;3.56e-10;104!CL:0000815;2.50e-08;2!CL:0000792;2.50e-08;2!CL:0002677;2.50e-08;2!CL:0001014;3.09e-08;2!CL:0000771;3.09e-08;2!CL:0001016;3.09e-08;2!CL:0000738;6.36e-08;136!CL:0000542;7.51e-08;53!CL:0000451;1.19e-07;10!CL:0000860;2.07e-07;33!CL:0002057;2.07e-07;33!CL:0000576;4.50e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.82e-47,136;CL:0000037,5.23e-38,168;CL:0000988,1.66e-35,177;CL:0002032,7.39e-31,161;CL:0000837,7.39e-31,161;CL:0002031,7.07e-30,120;CL:0002087,9.17e-28,115;CL:0000766,1.57e-23,72;CL:0000624,2.03e-20,6;CL:0000557,2.41e-19,67;CL:0000763,6.42e-18,108;CL:0000049,6.42e-18,108;CL:0000791,1.52e-16,18;CL:0000789,1.52e-16,18;CL:0002420,1.52e-16,18;CL:0002419,1.52e-16,18;CL:0000790,1.52e-16,18;CL:0000094,4.27e-15,8;CL:0002009,2.88e-14,61;CL:0000839,3.72e-14,66;CL:0000860,7.86e-14,42;CL:0002057,7.86e-14,42;CL:0000473,2.00e-13,48;CL:0000234,2.00e-13,48;CL:0000838,1.32e-12,52;CL:0000542,2.68e-12,53;CL:0000051,2.68e-12,53;CL:0000134,4.23e-12,354;CL:0000898,7.90e-12,3;CL:0002320,1.20e-11,361;CL:0002194,1.95e-11,59;CL:0000576,1.95e-11,59;CL:0000040,1.95e-11,59;CL:0000559,1.95e-11,59;CL:0000084,2.40e-11,25;CL:0000827,2.40e-11,25;CL:0000623,3.91e-11,3;CL:0000825,3.91e-11,3;CL:0000767,7.71e-11,3;CL:0000081,8.75e-11,11;CL:0000784,8.82e-11,3;CL:0000226,1.32e-10,3;CL:0000842,1.32e-10,3;CL:0000219,4.67e-10,386;CL:0002393,7.25e-09,9;CL:0002397,7.25e-09,9;CL:0000034,7.37e-09,441;CL:0000815,2.42e-08,2;CL:0000792,2.42e-08,2;CL:0002677,2.42e-08,2;CL:0000771,2.69e-08,2;CL:0001014,3.32e-08,2;CL:0001016,3.32e-08,2;CL:0000048,4.00e-08,427;CL:0000723,7.37e-08,433;CL:0000451,1.17e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000790;1.09e-16;18!CL:0002057;2.39e-09;42!CL:0000051;7.51e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.43e-28!80;UBERON:0002390!1.00e-25!102;UBERON:0003061!1.00e-25!102;UBERON:0001474!1.49e-25!86;UBERON:0004765!8.45e-23!101;UBERON:0001434!8.45e-23!101;UBERON:0002193!5.24e-22!112;UBERON:0002405!1.12e-16!115;UBERON:0002384!7.26e-16!375;UBERON:0002204!2.21e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.74e-17,98;UBERON:0003061,3.74e-17,98;UBERON:0002371,2.07e-16,76;UBERON:0002193,5.77e-15,108;UBERON:0001474,8.17e-15,82;UBERON:0002405,6.92e-14,93;UBERON:0004765,5.09e-13,90;UBERON:0001434,3.46e-11,100;UBERON:0002384,4.96e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2274711980715,2.68680578668049,2.01260960310899,0,0,0,0.0774672005803016,0,0.587200878669695,1.66198622559563,0.401088894940283,0.651032612147555,0,0,0,0,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0,0.768482119587302,1.41889337933151,1.03423704220986,3.22742341791913,4.06279459783025,0.941211697713023,0.272906150057846,3.37085226667627,0.306083892370903,2.56743221660875,3.83602275479425,0,0,0.426224750532694,0.580418477257168,0.56738522469114,0,0,0.521482918420201,1.95469960234605,0.605399502633369,0.368277635987565,0.949387162322653,2.5350634357433,2.12604299965044,0.838634582033504,2.92054440980887,1.20141514273205,0.803627933485401,3.99017841237748,2.38700012638908,0.91332076882317,0,0,0,0,0.400395987036012,0.574752439954483,0,0,1.70763890732835,2.93618594685469,4.20500550937752,9.25199300053181,4.48406850385229,0.790152254325231,1.180258620683,1.17903228824749,11.1024809459735,0,7.49621213257258,7.57516489175573,3.89653456815823,0.111410456885174,4.41908861212256,3.54454231333794,5.1452734115353,0.384273959177026,0,0,0.276350017785848,0,4.00373720537563,2.94294910898684,5.22677619024884,0,12.6462762888634,4.81078423675682,5.81945291644857,0.318565414324097,0,0,0.451725357233318,0,1.24930726552346,0.236777252044017,0,2.01606743224732,1.60464117470104,2.46201486600758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90792499444274,3.43196946468077,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,3.87780264148325,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0.088048434013226,1.65862492432618,0.720599767084807,2.39860623510122,0.126995788584338,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,3.94061520403854,4.09692392233083,3.08023287071396,0,0,0,0,0,0,0,2.90090859405225,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,1.86091223510599,3.23571301227925,3.62873696531711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0.432164393964449,0,0.235694034616795,0,0,0,0,0,0,2.55493176133945,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37460837327251,11.6070293183692,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.701139929541673,0,0.378806010550178,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0.471797825567689,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:46196136..46196138,- | |||
}} |
Revision as of 23:59, 20 January 2014
Short description: | p@chr19:46196136..46196138, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:46196136..46196138, - |
Coexpression cluster: | C3803_CD34_Eosinophils_CD4_immature_Basophils_CD19_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.74e-17 | 98 |
blood island | 3.74e-17 | 98 |
bone marrow | 2.07e-16 | 76 |
hemolymphoid system | 5.77e-15 | 108 |
bone element | 8.17e-15 | 82 |
immune system | 6.92e-14 | 93 |
skeletal element | 5.09e-13 | 90 |
skeletal system | 3.46e-11 | 100 |
connective tissue | 4.96e-11 | 371 |