FFCP PHASE1:Hg19::chr19:45261267..45261280,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:45261267..45261280,+ | |||
|id=chr19:45261267..45261280,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.55e-14!180;CL:0000680!3.16e-12!57;CL:0000056!3.16e-12!57;CL:0000355!3.16e-12!57;CL:0000183!5.73e-12!59;CL:0000222!1.33e-11!119;CL:0000187!1.34e-11!54;CL:0000393!2.62e-11!60;CL:0000211!2.62e-11!60;CL:0000188!1.16e-07!9;CL:0000192!3.91e-07!42;CL:0000514!3.91e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002599;1.41e-16;1!CL:0002097;3.43e-09;2!CL:0000650;5.93e-09;2!CL:1000500;5.93e-09;2!CL:1000618;5.93e-09;2!CL:1001318;5.93e-09;2!CL:0002363;5.93e-09;2!CL:0002173;5.93e-09;2!CL:0002367;5.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002599,6.47e-17,1;CL:0002097,3.43e-09,2;CL:0002367,7.49e-09,2;CL:0002363,8.09e-09,2;CL:0000008,8.09e-09,2;CL:0000650,8.74e-09,2;CL:1000500,8.74e-09,2;CL:1000618,8.74e-09,2;CL:1001318,8.74e-09,2;CL:0002173,8.74e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000008;5.93e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!2.10e-13!70;UBERON:0002385!8.06e-12!63;UBERON:0001015!8.06e-12!63;UBERON:0000383!8.06e-12!63;UBERON:0001134!1.24e-11!61;UBERON:0002036!1.24e-11!61;UBERON:0003082!1.24e-11!61;UBERON:0000486!2.03e-11!82;UBERON:0000914!4.01e-11!83;UBERON:0002329!4.01e-11!83;UBERON:0003077!4.01e-11!83;UBERON:0003059!4.01e-11!83;UBERON:0007282!4.01e-11!83;UBERON:0009618!4.01e-11!83;UBERON:0007285!4.01e-11!83;UBERON:0000119!5.31e-11!312;UBERON:0000483!7.67e-11!309;UBERON:0005256!2.89e-09!143;UBERON:0000481!3.12e-08!347;UBERON:0002049!8.55e-08!79;UBERON:0007798!8.55e-08!79;UBERON:0000970!1.22e-07!20;UBERON:0002104!4.19e-07!21;UBERON:0000019!5.12e-07!19;UBERON:0000047!5.12e-07!19;UBERON:0004088!5.12e-07!19;UBERON:0003072!5.12e-07!19;UBERON:0003071!5.12e-07!19;UBERON:0004128!5.12e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0003891;3.32e-16;4!UBERON:0003566;5.93e-09;2!UBERON:0003567;5.93e-09;2!UBERON:0003838;5.93e-09;2!UBERON:0003586;5.93e-09;2!UBERON:0005169;5.93e-09;2!UBERON:0002321;5.93e-09;2!UBERON:0001777;5.93e-09;2!UBERON:0005969;5.93e-09;2!UBERON:0005215;5.93e-09;2!UBERON:0002303;5.93e-09;2!UBERON:0002319;5.93e-09;2!UBERON:0003956;5.93e-09;2!UBERON:0002067;1.02e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003891,6.61e-16,4;UBERON:0005969,7.49e-09,2;UBERON:0003956,7.49e-09,2;UBERON:0003566,8.09e-09,2;UBERON:0001777,8.09e-09,2;UBERON:0003567,8.74e-09,2;UBERON:0003838,8.74e-09,2;UBERON:0003586,8.74e-09,2;UBERON:0005169,8.74e-09,2;UBERON:0002321,8.74e-09,2;UBERON:0005215,8.74e-09,2;UBERON:0002303,8.74e-09,2;UBERON:0002319,8.74e-09,2;UBERON:0002067,8.90e-08,9;UBERON:0004016,8.90e-08,9;UBERON:0010083,8.90e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.247532705920093,0,0,0,0,0,0.369363174230364,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0.12663051166458,0,0,1.06400514659507,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0.70296429550139,0,1.1409436430889,0,0.117434498643765,0.323745888736263,0.280901613404497,0,0.368502951935304,0.206651562351531,0,0,0.910161361938026,0.718618141816238,0,0.500474079487857,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0.339121184620975,0,0,0,0.365921118388786,0,0.464775771478074,0.207322110030741,0.252320850875628,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0.0925884451585296,0.651616610620649,1.03993478527958,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0.763976851116555,0,0,0,0,0.285826432630578,0,0.43596006883328,0,0,3.57656445851882,0.845302752556,0,0,0,0,0.266422179016099,0.285955987316295,0,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0.160853921143607,0,0.462629081407967,0,0.246381468041427,0,0,0,0,0,0.574072240823034,0,0.393373244878272,0.451199612907412,0,0,0,0.316654886678627,0,0,0,0,0.541892875087706,1.00337954770971,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0.512900250232778,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0.462145851343933,0.614014698904518,0.275673144969061,0.214840489736547,0.290033387828457,0.426133137080504,0.801288320820636,0,0,0,0,0,0.31481234683064,0,0,0,0.869932992075073,0.37064843820784,0,0,0.316379424718726,0.190630193923825,0.511795582622668,0,0.95460974377781,0.78494864019923,0.179872457583315,0.54907405947211,0.471249609382746,0.202182481573316,1.58510321173008,0,1.95053495635836,0.243713489631284,0,0.545999645631943,0.707027159768564,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0.563391205064483,0,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,0.379473173765715,1.04980416073495,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0.988823245360557,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.448788222048861,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0.441280633457501,0.225980740780532,0,0,0,0,0,0,0,0,0,0,1.58460277786965,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0.429226048136571,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0.0607495566580247,0,0,0.157363764404994,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.427149650270779,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0.701139929541673,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770479321629213,7.07657251537255,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0.506827321959218,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0.177404740325278,0,0,0,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,0,0.142953088353313,0,0.929931402945002,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.845855261818682,0.128915775947154,0,0,0,0,0,0.917458566809082,0,0,0,0,1.0580536810308,0.743990036333503,0,0,0.126166424835079,0.109265571963696,0,0.407955318967927,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0.190941474834495,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |||
|short_description=p@chr19:45261267..45261280,+ | |||
}} |
Revision as of 23:47, 20 January 2014
Short description: | p@chr19:45261267..45261280, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45261267..45261280, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the esophagus | 6.47e-17 | 1 |
cortical cell of adrenal gland | 3.43e-09 | 2 |
trabecular meshwork cell | 7.49e-09 | 2 |
keratocyte | 8.09e-09 | 2 |
migratory cranial neural crest cell | 8.09e-09 | 2 |
mesangial cell | 8.74e-09 | 2 |
kidney interstitial cell | 8.74e-09 | 2 |
juxtaglomerular complex cell | 8.74e-09 | 2 |
renal interstitial pericyte | 8.74e-09 | 2 |
extraglomerular mesangial cell | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma | 6.61e-16 | 4 |
reticulum trabeculare | 7.49e-09 | 2 |
aqueous drainage system | 7.49e-09 | 2 |
head connective tissue | 8.09e-09 | 2 |
substantia propria of cornea | 8.09e-09 | 2 |
abdomen connective tissue | 8.74e-09 | 2 |
abdominal segment connective tissue | 8.74e-09 | 2 |
trunk connective tissue | 8.74e-09 | 2 |
interstitial tissue | 8.74e-09 | 2 |
extraglomerular mesangium | 8.74e-09 | 2 |
kidney interstitium | 8.74e-09 | 2 |
juxtaglomerular apparatus | 8.74e-09 | 2 |
mesangium | 8.74e-09 | 2 |
dermis | 8.90e-08 | 9 |
dermatome | 8.90e-08 | 9 |
future dermis | 8.90e-08 | 9 |