FFCP PHASE1:Hg19::chr19:44100218..44100238,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126298 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24868 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WZA9 | |||
|association_with_transcript=48bp_to_ENST00000422989,NM_001007561,uc010eiv.2_5end | |||
|description=CAGE_peak_4_at_IRGQ_5end | |||
|id=chr19:44100218..44100238,- | |||
|ontology_enrichment_celltype=CL:0002057!1.33e-11!42;CL:0000860!5.14e-11!45;CL:0002009!5.68e-08!65;CL:0000557!7.72e-08!71;CL:0002194!3.28e-07!63;CL:0000576!3.28e-07!63;CL:0000040!3.28e-07!63;CL:0000559!3.28e-07!63;CL:0000839!6.66e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-09;33!CL:0002057;1.03e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.46e-12,42;CL:0002057,4.46e-12,42;CL:0000473,5.99e-10,48;CL:0000234,5.99e-10,48;CL:0000557,2.90e-09,67;CL:0002009,3.61e-09,61;CL:0002194,3.69e-08,59;CL:0000576,3.69e-08,59;CL:0000040,3.69e-08,59;CL:0000559,3.69e-08,59;CL:0000839,5.64e-08,66;CL:0000766,1.30e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000922!4.92e-16!612;UBERON:0000468!1.47e-14!659;UBERON:0002050!1.12e-13!605;UBERON:0005423!1.12e-13!605;UBERON:0000923!2.69e-13!604;UBERON:0005291!2.69e-13!604;UBERON:0006598!2.69e-13!604;UBERON:0002532!2.69e-13!604;UBERON:0000480!4.74e-13!626;UBERON:0000467!5.53e-13!625;UBERON:0000025!1.50e-09!194;UBERON:0004111!8.23e-09!241;UBERON:0000062!5.14e-08!511;UBERON:0000483!9.98e-08!309;UBERON:0003081!1.13e-07!216;UBERON:0000119!1.69e-07!312;UBERON:0001474!1.84e-07!86;UBERON:0002371!3.43e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,8.81e-13,592;UBERON:0000025,1.92e-11,192;UBERON:0005423,3.18e-11,581;UBERON:0002050,5.95e-10,564;UBERON:0000923,3.37e-09,560;UBERON:0010316,3.37e-09,560;UBERON:0005291,3.37e-09,560;UBERON:0006598,3.37e-09,560;UBERON:0010317,3.37e-09,560;UBERON:0002532,3.37e-09,560;UBERON:0000073,3.84e-09,53;UBERON:0002616,3.84e-09,53;UBERON:0004111,4.63e-09,240;UBERON:0003081,1.10e-08,203;UBERON:0002371,1.98e-08,76;UBERON:0001049,4.52e-08,56;UBERON:0005068,4.52e-08,56;UBERON:0006241,4.52e-08,56;UBERON:0007135,4.52e-08,56;UBERON:0001474,4.54e-08,82;UBERON:0000483,2.05e-07,306;UBERON:0004765,3.36e-07,90;UBERON:0000119,4.66e-07,309 | |||
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| |||
|short_description=p4@IRGQ | |||
}} |
Revision as of 23:40, 20 January 2014
Short description: | p4@IRGQ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IRGQ_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_ENST00000422989, NM_001007561, uc010eiv.2_5end |
EntrezGene: | IRGQ |
HGNC: | 24868 |
UniProt: | Q8WZA9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.46e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.46e-12 | 42 |
defensive cell | 5.99e-10 | 48 |
phagocyte | 5.99e-10 | 48 |
granulocyte monocyte progenitor cell | 2.90e-09 | 67 |
macrophage dendritic cell progenitor | 3.61e-09 | 61 |
monopoietic cell | 3.69e-08 | 59 |
monocyte | 3.69e-08 | 59 |
monoblast | 3.69e-08 | 59 |
promonocyte | 3.69e-08 | 59 |
myeloid lineage restricted progenitor cell | 5.64e-08 | 66 |
myeloid leukocyte | 1.30e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
embryo | 8.81e-13 | 592 |
tube | 1.92e-11 | 192 |
developing anatomical structure | 3.18e-11 | 581 |
embryonic structure | 5.95e-10 | 564 |
germ layer | 3.37e-09 | 560 |
germ layer / neural crest | 3.37e-09 | 560 |
embryonic tissue | 3.37e-09 | 560 |
presumptive structure | 3.37e-09 | 560 |
germ layer / neural crest derived structure | 3.37e-09 | 560 |
epiblast (generic) | 3.37e-09 | 560 |
regional part of nervous system | 3.84e-09 | 53 |
regional part of brain | 3.84e-09 | 53 |
anatomical conduit | 4.63e-09 | 240 |
lateral plate mesoderm | 1.10e-08 | 203 |
bone marrow | 1.98e-08 | 76 |
neural tube | 4.52e-08 | 56 |
neural rod | 4.52e-08 | 56 |
future spinal cord | 4.52e-08 | 56 |
neural keel | 4.52e-08 | 56 |
bone element | 4.54e-08 | 82 |
epithelium | 2.05e-07 | 306 |
skeletal element | 3.36e-07 | 90 |
cell layer | 4.66e-07 | 309 |