FFCP PHASE1:Hg19::chr19:41859852..41859858,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7040 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11766 | |||
|TSSclassifier=strong | |||
|UniProt=P01137 | |||
|association_with_transcript=-21bp_to_ENST00000221930,NM_000660_5end | |||
|description=CAGE_peak_7_at_TGFB1_5end | |||
|id=chr19:41859852..41859858,- | |||
|ontology_enrichment_celltype=CL:0002371!1.05e-21!591;CL:0000144!3.61e-17!625;CL:0000723!3.13e-13!436;CL:0000048!5.31e-13!430;CL:0000548!1.12e-12!679;CL:0000004!1.12e-12!679;CL:0000255!1.12e-12!679;CL:0000012!3.46e-12!682;CL:0000055!1.88e-11!180;CL:0000034!1.92e-11!444;CL:0000680!2.18e-09!57;CL:0000056!2.18e-09!57;CL:0000355!2.18e-09!57;CL:0000183!4.24e-09!59;CL:0000192!4.44e-09!42;CL:0000514!4.44e-09!42;CL:0000359!1.04e-08!32;CL:0000187!1.16e-08!54;CL:0000003!1.30e-07!722;CL:0002320!1.60e-07!365;CL:0000134!2.82e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.26e-08;32!CL:0000192;2.06e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.55e-15,433;CL:0000048,4.15e-15,427;CL:0000034,1.10e-13,441;CL:0000192,1.30e-09,43;CL:0000514,1.30e-09,43;CL:0000680,1.34e-09,58;CL:0000056,1.34e-09,58;CL:0000355,1.34e-09,58;CL:0000359,7.01e-09,32;CL:0000187,7.40e-09,55;CL:0002320,9.90e-09,361;CL:0000134,1.62e-08,354;CL:0000219,6.81e-08,386 | |||
|ontology_enrichment_development_v019=CL:0000514;2.06e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.51e-12!216;UBERON:0002204!1.68e-11!167;UBERON:0000926!3.10e-10!448;UBERON:0004120!3.10e-10!448;UBERON:0006603!3.10e-10!448;UBERON:0004290!2.17e-09!70;UBERON:0000486!4.67e-09!82;UBERON:0001134!1.12e-08!61;UBERON:0002036!1.12e-08!61;UBERON:0003082!1.12e-08!61;UBERON:0000914!1.17e-08!83;UBERON:0002329!1.17e-08!83;UBERON:0003077!1.17e-08!83;UBERON:0003059!1.17e-08!83;UBERON:0007282!1.17e-08!83;UBERON:0009618!1.17e-08!83;UBERON:0007285!1.17e-08!83;UBERON:0005256!1.73e-08!143;UBERON:0002385!2.39e-08!63;UBERON:0001015!2.39e-08!63;UBERON:0000383!2.39e-08!63;UBERON:0004872!5.06e-08!84;UBERON:0003914!3.32e-07!118;UBERON:0002100!3.52e-07!216;UBERON:0002384!3.62e-07!375;UBERON:0001637!7.03e-07!42;UBERON:0003509!7.03e-07!42;UBERON:0004572!7.03e-07!42;UBERON:0001981!7.22e-07!60;UBERON:0007500!7.22e-07!60;UBERON:0004537!7.22e-07!60;UBERON:0006965!7.22e-07!60 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.74e-14,315;UBERON:0004120,2.74e-14,315;UBERON:0006603,2.74e-14,315;UBERON:0002204,7.80e-13,167;UBERON:0003081,2.43e-12,203;UBERON:0007503,2.65e-10,78;UBERON:0002329,9.73e-10,71;UBERON:0003059,9.73e-10,71;UBERON:0007282,9.73e-10,71;UBERON:0004290,9.73e-10,71;UBERON:0009618,9.73e-10,71;UBERON:0003077,3.10e-09,72;UBERON:0007285,3.10e-09,72;UBERON:0000486,3.82e-09,83;UBERON:0007524,5.13e-09,73;UBERON:0001134,5.25e-09,62;UBERON:0002036,5.25e-09,62;UBERON:0003082,5.25e-09,62;UBERON:0002385,1.14e-08,64;UBERON:0001015,1.14e-08,64;UBERON:0000383,1.14e-08,64;UBERON:0002384,3.07e-08,371;UBERON:0004872,3.19e-08,83;UBERON:0005256,6.51e-08,122;UBERON:0002100,1.66e-07,199;UBERON:0003104,1.74e-07,160;UBERON:0009142,1.74e-07,160;UBERON:0003914,2.22e-07,117;UBERON:0001637,5.17e-07,42;UBERON:0003509,5.17e-07,42;UBERON:0004572,5.17e-07,42;UBERON:0007500,5.97e-07,59;UBERON:0001981,5.97e-07,59;UBERON:0004537,5.97e-07,59;UBERON:0006965,5.97e-07,59 | |||
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| |||
|short_description=p7@TGFB1 | |||
}} |
Revision as of 23:28, 20 January 2014
Short description: | p7@TGFB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TGFB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000221930, NM_000660_5end |
EntrezGene: | TGFB1 |
HGNC: | 11766 |
UniProt: | P01137 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.55e-15 | 433 |
multi fate stem cell | 4.15e-15 | 427 |
stem cell | 1.10e-13 | 441 |
smooth muscle cell | 1.30e-09 | 43 |
smooth muscle myoblast | 1.30e-09 | 43 |
muscle precursor cell | 1.34e-09 | 58 |
myoblast | 1.34e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.34e-09 | 58 |
vascular associated smooth muscle cell | 7.01e-09 | 32 |
muscle cell | 7.40e-09 | 55 |
connective tissue cell | 9.90e-09 | 361 |
mesenchymal cell | 1.62e-08 | 354 |
motile cell | 6.81e-08 | 386 |