FFCP PHASE1:Hg19::chr19:41119794..41119844,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8425 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6717 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002oom.1_5end | |||
|coexpression_cluster_id=C3791 | |||
|description=CAGE_peak_6_at_LTBP4_5end | |||
|id=chr19:41119794..41119844,+ | |||
|ontology_enrichment_celltype=CL:0000144!4.86e-10!625;CL:0002371!1.91e-09!591;CL:0000055!1.14e-08!180;CL:0000057!1.29e-07!75;CL:0000192!5.11e-07!42;CL:0000514!5.11e-07!42;CL:0002077!8.09e-07!33;CL:0000183!9.17e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,7.18e-08,43;CL:0000514,7.18e-08,43;CL:0000057,1.25e-07,76;CL:0002077,8.28e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!4.02e-11!95;UBERON:0001444!8.70e-09!48;UBERON:0000914!1.66e-07!83;UBERON:0002329!1.66e-07!83;UBERON:0003077!1.66e-07!83;UBERON:0003059!1.66e-07!83;UBERON:0007282!1.66e-07!83;UBERON:0009618!1.66e-07!83;UBERON:0007285!1.66e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.45e-12,99;UBERON:0001444,2.03e-08,49;UBERON:0000033,5.94e-08,56;UBERON:0000153,1.60e-07,62;UBERON:0007811,1.60e-07,62;UBERON:0007503,2.63e-07,78 | |||
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| |||
|short_description=p6@LTBP4 | |||
}} |
Revision as of 23:22, 20 January 2014
Short description: | p6@LTBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LTBP4_5end |
Coexpression cluster: | C3791_Mesenchymal_Trabecular_Fibroblast_Prostate_Smooth_Nucleus_sacrococcigeal |
Association with transcript: | 0bp_to_uc002oom.1_5end |
EntrezGene: | LTBP4 |
HGNC: | 6717 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 7.18e-08 | 43 |
smooth muscle myoblast | 7.18e-08 | 43 |
fibroblast | 1.25e-07 | 76 |
ecto-epithelial cell | 8.28e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
surface structure | 8.45e-12 | 99 |
subdivision of head | 2.03e-08 | 49 |
head | 5.94e-08 | 56 |
anterior region of body | 1.60e-07 | 62 |
craniocervical region | 1.60e-07 | 62 |
epithelial vesicle | 2.63e-07 | 78 |