FFCP PHASE1:Hg19::chr19:39898362..39898396,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C399 | |||
|description=CAGE_peak_at_chr19:39898362..39898396,+ | |||
|id=chr19:39898362..39898396,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.40e-25!140;CL:0002057!2.48e-22!42;CL:0002087!4.31e-19!119;CL:0000860!5.76e-19!45;CL:0002031!3.85e-18!124;CL:0000766!1.18e-16!76;CL:0000037!5.91e-15!172;CL:0000566!5.91e-15!172;CL:0002009!2.85e-13!65;CL:0002032!3.24e-13!165;CL:0000837!3.24e-13!165;CL:0000557!4.71e-13!71;CL:0000988!5.36e-13!182;CL:0002194!3.35e-12!63;CL:0000576!3.35e-12!63;CL:0000040!3.35e-12!63;CL:0000559!3.35e-12!63;CL:0000839!1.81e-11!70;CL:0000763!1.27e-07!112;CL:0000049!1.27e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.02e-21;33!CL:0002057;8.02e-21;33!CL:0000576;5.00e-15;48!CL:0000473;6.00e-15;39!CL:0000234;6.00e-15;39!CL:0000766;5.17e-13;69!CL:0002087;2.55e-08;104!CL:0000094;2.58e-08;8!CL:0000738;7.02e-08;136!CL:0000624;5.90e-07;6!CL:0000791;7.06e-07;18!CL:0000789;7.06e-07;18!CL:0002419;7.06e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.36e-33,136;CL:0000860,4.10e-30,42;CL:0002057,4.10e-30,42;CL:0000473,1.92e-26,48;CL:0000234,1.92e-26,48;CL:0000766,4.75e-26,72;CL:0002031,5.72e-24,120;CL:0002087,8.73e-24,115;CL:0000557,5.29e-21,67;CL:0002009,1.65e-20,61;CL:0000037,2.17e-20,168;CL:0002194,6.31e-19,59;CL:0000576,6.31e-19,59;CL:0000040,6.31e-19,59;CL:0000559,6.31e-19,59;CL:0000839,7.18e-19,66;CL:0002032,4.18e-18,161;CL:0000837,4.18e-18,161;CL:0000988,1.01e-17,177;CL:0000763,3.20e-13,108;CL:0000049,3.20e-13,108;CL:0002393,2.58e-08,9;CL:0002397,2.58e-08,9;CL:0000094,2.72e-08,8;CL:0000791,5.30e-07,18;CL:0000789,5.30e-07,18;CL:0002420,5.30e-07,18;CL:0002419,5.30e-07,18;CL:0000790,5.30e-07,18;CL:0000624,6.23e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.58e-21;42!CL:0000790;7.06e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.27e-16!102;UBERON:0003061!3.27e-16!102;UBERON:0002193!6.70e-15!112;UBERON:0002371!5.53e-13!80;UBERON:0001474!1.41e-11!86;UBERON:0004765!4.26e-10!101;UBERON:0001434!4.26e-10!101;UBERON:0002405!9.59e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.07e-18,98;UBERON:0003061,5.07e-18,98;UBERON:0002371,5.35e-18,76;UBERON:0002193,5.00e-17,108;UBERON:0001474,1.12e-16,82;UBERON:0002405,1.76e-15,93;UBERON:0004765,2.79e-15,90;UBERON:0001434,1.59e-12,100 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.140954404095971,0,0.446961094427288,0,0,0,0.783556884599516,1.22866968250754,2.09340350391728,3.05817920982241,2.37390280405608,1.11389717664042,0.994192127183747,0,0,0,0,0,0.204000691244253,0,0,0,0,0.382067028739756,0.410502947249729,0.236132343941038,17.7013924582007,9.59573495243032,9.90823189222886,2.75826367343678,0.90361775633475,3.32778609150109,0.46480320348181,0,0.587200878669695,25.4837887924664,29.8811226730511,34.2877175731046,0.223915474239924,0.32389366601898,0.77272670290256,2.90796477559129,1.88937971844405,4.60909716256851,8.59987436551033,6.16751832032739,5.88442104700697,16.1107739700404,10.246428261164,6.85798466676897,14.479318590938,10.3277549373412,5.41705946377367,6.02375486536335,5.45812300115692,2.9214052977861,12.549439587207,11.8743740018155,15.344091019177,8.90598510504134,7.57961898962201,11.5080682643827,4.64334781805734,5.6738522469114,9.9651559839292,12.8136819280939,5.73631210262222,8.47036494349955,3.63239701580021,4.05105399586321,6.64571013625857,6.33765858935825,9.779797798392,5.45112478321777,6.8520464999362,7.80919842775833,5.14321877430656,6.55529310604872,7.16100037916724,5.66258876670365,3.51992488922645,1.63841583378639,3.55803701545422,0.853460445133014,2.00197993518006,4.59801951963587,3.30522436392431,3.81621501814146,25.0453706408157,31.1235710366598,30.5818582500183,10.5737062863221,5.04457706683382,0.790152254325231,34.6209195400346,38.5150547494181,37.0082698199117,6.52027332023645,11.4072793321757,16.0972253949809,5.84480185223734,10.249762033436,20.0332017082889,11.7412964129319,18.6854665997861,12.1686753739391,12.7458160608681,1.31550323682941,1.93445012450094,1.73881851441031,12.307784742451,8.56130649887082,7.31748666634838,3.96582699441482,11.4966148080576,13.4014703738226,13.1570239850141,1.59282707162048,1.30216690771284,2.85135613334512,1.50575119077773,1.66382594500744,0,0.473554504088034,0.821127996921047,22.7815619843948,31.8253832982374,24.0408510445446,14.6284119788377,0.670700859703636,0,0.361439152384566,0,0.579386075843295,0,0,0,0,0.087834785693126,0.851363990735132,2.91436230634034,1.48313777113772,0.324547393654683,0.174129737299267,0,28.1418936680304,22.307801520425,27.8593125997174,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,25.038279312852,31.022421131866,1.74437620857014,0,0,0.264818361626438,0.286836620748814,1.06400514659507,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0.624320153660641,0,0.298897361103602,0,0.161872944368132,0,0.408308342509787,0,0.723280468230358,1.18800285728205,0.247266929278557,2.73048408581408,1.43723628363248,0,0,0.554128230968366,0.438977620880838,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0.423863802319124,0.300091096084402,0,0.772921620136887,0,0.843881661206331,0,0.252433774244115,0.0920498986422993,0.646584227275248,1.06502877754984,0.10075209822764,0,0.57978255948989,1.09098448236334,0,0,0,0.116193942869518,0,0.504641701751257,0,0,0,0,6.96551892047969,1.44375896333917,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,2.53510069643662,0.982827216677626,2.95394953340702,0,0.737930631258681,0.343135620597051,1.97550513735526,4.49607013030478,0.904760751704678,1.01847289674383,0,0,0,0,0.234817388471643,0,0,0.190254152234598,12.6432703673484,5.15091697256924,0,0,0.148631162288728,0.93733833986777,0.335964256397719,0.283550194484773,1.07470227243418,1.45316969256981,0.766765358330422,0,0,22.8060927094849,38.7682674691626,19.0626074473834,0.126995788584338,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0,3.57656445851882,0,0,0,0.514414748524284,0,0.266422179016099,1.42977993658148,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0,0,0,0,1.00451418286425,4.21667878966063,0,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0.672510863961164,21.2793221018081,21.1315023362327,26.6953515461877,0,1.30139853857622,0,0.167516265334349,0,8.23907726341901,35.899375104483,15.3333739971333,0.981531933753119,1.50051156317903,1.35632511849868,0.207970861530807,1.78428988797162,0.630809660135739,0.702848489956279,0,0,0,0,0.184369168541703,0.0868836144680828,0.587403472388222,0.343143423810856,19.0226584033056,13.3742804507542,21.2387840028854,6.97193414326397,1.66435439510497,2.11673205330776,0.248107807818777,0.153461973288062,0,0.128139149255701,1.02341449813341,0,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.362578348774867,1.40354529212299,2.20994373446151,0.114814448164607,0,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0.137836572484531,0.214840489736547,0,0.0852266274161009,0.0890320356467374,1.65284915360978,0.960950336825531,1.91419068741876,1.8208400553999,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,1.2655176988749,0.190630193923825,0.255897791311334,1.71175595213568,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0.551365343546124,0,0.438450885253763,0.578775534266688,3.9353685122798,0,0.92947049429925,0,0.286822704408103,0,0,0,3.37772216476263,0.987884678879706,0,0,0.384888450902048,1.34060455107157,3.26672954583968,2.07116361708914,1.29151611801369,5.05414427002877,2.66058092122005,0.459446800413919,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,2.05681136543097,4.53931317834902,4.32025149790492,1.58625035258854,0.106824071127473,0,4.16568367167754,0.371606350251437,0,0,0,0.59873811429845,0,0.423347165447766,0,0,0,0,0,0.338583555603207,0.642352300414798,0.201799707191048,0.851692475380653,0.343505344755765,0.307240764308458,0,0.166849141711909,0,0.278406173895242,0,0,0,0,2.99424864653152,2.4906390476222,0,1.11443384277478,0,4.7748896947538,1.18785872333055,5.22173193568695,0,0.281338832821026,0.111308705022906,0.16480387422676,0,4.78195171802567,4.42054264849836,0,0.102268682502155,0.369254416383208,0.311039587661807,0.449341755736634,1.61119057208048,0,7.20096861149615,2.3948309234694,4.44547960578548,0,0.0927680981618513,0,2.86470537193757,4.72283999979457,3.62499787717397,0.568967241427498,3.55955110409873,1.89110145414349,0,0,0.173624994933292,0.885741385813839,0.241192877250816,0,0,0,0.658156191461918,0,5.01925479402972,3.61666214967846,0,0,0,0.217294743844016,3.50901275705111,0.274792780205587,9.06159119231679,0,0,0,0.225595660617181,0,0,0,0.476809736941136,0,0.326465616318295,0,0,0,2.65372693510018,9.16545217400438,0.889563386041866,0.123563938946503,0.208843899010911,0.202203398942031,0.802577647298789,0,0,3.32629852184552,0.242780379534093,1.18375320854817,1.20990716048664,0,2.46427660551103,0.60129367765797,0,1.32930774541437,0.330991955875499,0.627865836814451,0,1.70765727617876,0,0,6.07552863969141,3.74354588295731,1.39781334593624,1.0319161948297,0,0,0,9.79589066533036,0.0882561266915003,2.03382666702479,0,0,0,2.15106521008283,3.04603516955828,5.33632486848381,0.39961921916426,1.00863292007874,0.114536596165916,0.171594997861965,0.576219191952599,0,4.47818665771911,0.135904206073614,0.209205692624666,0,0.288950589901519,0.600420288709789,0.410716136675979,0,0,0.262887354279314,3.35138881526705,0.916641696046735,2.87149209830726,0.798716001995964,0.858452096273142,1.11585728720936,0.335917362433631,0.360299883542404,0,0,0,0,0.196854963029498,0.0846733320657845,1.59045937961861,0,0.482259445395058,0,0,20.4726241311865,48.7495231371508,0.0607495566580247,1.34173875039706,0.630445658393585,1.10154635083496,0.422401346077626,0.896436696664224,8.25235348473615,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0.170388021785422,0.453248366080503,0.58620893471233,0,3.10279095267721,0.26446520348538,0.684347351537318,0.704815022316672,7.36833146717093,7.07419372948497,4.55662960881915,2.48083010905975,0.395223263795889,0.365377795142688,1.91502377331055,13.6004450842369,9.2755260788399,5.20787480497885,4.59021682993726,1.09937867375164,0.886068179966986,1.22026264901963,0.1251909307065,2.29363678276028,0.110929051536852,0.496771223531068,0,0,0,0,0.235265819698172,0,0,0,0,1.10961172300523,0.757612021100357,0.754703705257725,1.77962244319307,1.14420034198462,1.20984739010591,0.310874401165561,0,0,0,0,0.414706207840855,0.265841714557995,0.521745061811734,0,0.380805212168795,0,0.545545977607678,0,0.464033759878494,0,0,0,0.336749488765919,1.26184898228651,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,1.55888247071511,1.32864840313363,0.163565394255844,0,0,2.3244333569449,0,0.213383459388282,0.688859918643263,0,0,2.79759015438889,1.24415452006595,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0.47317047000752,0,1.76337971845342,0,0.128458450192919,1.41696576325585,0.159633859057151,0.205116364240755,0,0.138314504928436,0,0,1.66851121451744,0.943757786781923,4.58571496304198,0.346576998451015,0,1.3807198521202,0,0.601682626794058,0,0.781514011233092,0.261906694481422,0.655087670040387,4.5835386727284,0,2.34323429584154,0.413373593002368,0.126831620387814,0,1.09651553371436,4.46590060550365,0.175871244359621,1.14986184875636,0.535701835878287,0.672567444437648,0,0,1.1531308121143,0.691403925334676,0.171488009437418,0.203909198930495,0.131545547125698,0.354581522651905,0.222462803784138,1.41287567130925,0.628462359664008,4.20408244970683,2.73947616152849,0.431855182437243,0.47775168788705,0.78624198594322,0,0,0,2.40513409419076,0.207216164163037,1.53646629384555,21.4290495162368,1.72090943528111,0,0,3.81048345171836,1.60374807980835,0,0,0.447421727191169,1.66855397145913,1.82876887473404,3.23714418593947,2.05325613712494,1.1598144313382,5.34282092365053,0.233939463462106,0.198950775161368,0,0.33883824611688,0,0.150962843566674,2.00652811080656,0.655678681511872,0.940634592723046,1.71603825227734,0.471353094203252,3.53355240806901,0.891139200981258,0.4226557275834,0.509781344063451,1.59772660565751,0.580120991762195,0.199882311849858,0.535661815816973,2.47026410200984,4.89472336803926,10.2247094354512,0.458729283404541,0.143339583151451,0,0.203974470572744,0,4.2322147241232,0,0.462175628631418,0.865253124247578,0,0,0,0.101988829741982,0,0,0,1.06090177505535,0.535928260312357,0.829169439458779,0.103432995861895,4.4779136199206,0.23806443146374,0.387533459016037,0.993195428733726,0.448527450322454,0.25458863311266,1.0105859447911,4.35433495793923,2.73786640868225,3.03084238565644,3.72955468041917,1.33064142618405,1.13964576055364,0.106727345877715,3.8614456457388,0.898252021065869,4.69281884806909,0.733448665097199,0.813792356631477,1.99727032255654,1.00636896795513,0.641136984606466 | |||
|short_description=p@chr19:39898362..39898396,+ | |||
}} |
Revision as of 23:13, 20 January 2014
Short description: | p@chr19:39898362..39898396, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39898362..39898396, + |
Coexpression cluster: | C399_CD19_Eosinophils_CD4_CD8_CD14_Basophils_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.07e-18 | 98 |
blood island | 5.07e-18 | 98 |
bone marrow | 5.35e-18 | 76 |
hemolymphoid system | 5.00e-17 | 108 |
bone element | 1.12e-16 | 82 |
immune system | 1.76e-15 | 93 |
skeletal element | 2.79e-15 | 90 |
skeletal system | 1.59e-12 | 100 |