FFCP PHASE1:Hg19::chr19:39574865..39574902,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=390928 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZNF0 | |||
|association_with_transcript=-42bp_to_ENST00000331256,NM_001004318,uc002oki.2_5end | |||
|description=CAGE_peak_3_at_PAPL_5end | |||
|id=chr19:39574865..39574902,+ | |||
|ontology_enrichment_celltype=CL:0002076!7.75e-14!43;CL:0002368!1.68e-11!13;CL:0000066!4.31e-10!254;CL:0000223!2.69e-09!59;CL:0000244!1.91e-07!4;CL:0000731!1.91e-07!4;CL:0002202!8.85e-07!9;CL:0002632!8.85e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002573;2.06e-13;2!CL:0000307;2.06e-13;3!CL:0002368;7.27e-12;13!CL:1001319;5.84e-11;1!CL:1000600;5.84e-11;1!CL:0002202;4.52e-10;9!CL:0002632;4.52e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,2.65e-13,2;CL:0000068,3.01e-13,3;CL:0000069,3.01e-13,3;CL:0000307,3.01e-13,3;CL:0000377,3.01e-13,3;CL:0002368,9.26e-12,13;CL:1001319,6.14e-11,1;CL:1000600,6.14e-11,1;CL:0002202,5.37e-10,9;CL:0002632,5.37e-10,9;CL:0000066,4.58e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.90e-29;3!CL:0000377;2.06e-13;3 | |||
|ontology_enrichment_disease=DOID:1749!2.40e-12!14;DOID:305!1.05e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3111;2.79e-11;1!DOID:3603;2.79e-11;1!DOID:3908;8.18e-09;5!DOID:1749;9.79e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,2.79e-11,1;DOID:3603,2.79e-11,1;DOID:305,2.68e-09,106;DOID:3908,8.03e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.95e-13!57;UBERON:0005068!4.95e-13!57;UBERON:0006241!4.95e-13!57;UBERON:0007135!4.95e-13!57;UBERON:0002616!3.17e-11!59;UBERON:0000344!3.74e-11!12;UBERON:0000483!2.27e-10!309;UBERON:0000955!2.88e-10!69;UBERON:0006238!2.88e-10!69;UBERON:0000119!4.34e-10!312;UBERON:0004111!8.82e-10!241;UBERON:0000365!4.09e-09!5;UBERON:0002780!8.26e-09!41;UBERON:0001890!8.26e-09!41;UBERON:0006240!8.26e-09!41;UBERON:0003080!1.73e-08!42;UBERON:0000064!1.92e-08!219;UBERON:0000033!2.12e-08!123;UBERON:0001017!2.69e-08!82;UBERON:0000475!3.34e-08!365;UBERON:0002020!9.89e-08!34;UBERON:0003528!9.89e-08!34;UBERON:0000073!1.11e-07!94;UBERON:0001016!1.11e-07!94;UBERON:0000481!1.32e-07!347;UBERON:0001893!1.34e-07!34;UBERON:0005743!1.39e-07!86;UBERON:0000153!1.40e-07!129;UBERON:0007811!1.40e-07!129;UBERON:0003729!1.53e-07!5;UBERON:0005910!1.76e-07!6;UBERON:0000025!3.31e-07!194;UBERON:0004121!4.45e-07!169;UBERON:0003075!5.69e-07!86;UBERON:0007284!5.69e-07!86;UBERON:0002791!5.82e-07!33;UBERON:0002680!9.13e-07!9;UBERON:0001895!9.13e-07!9;UBERON:0010092!9.13e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;5.83e-15;6!UBERON:0002294;4.67e-13;7!UBERON:0001173;4.67e-13;7!UBERON:0004913;3.58e-11;1!UBERON:0003703;3.58e-11;1!UBERON:0001174;3.58e-11;1!UBERON:0004914;3.58e-11;1!UBERON:0004645;5.84e-11;1!UBERON:0001256;5.84e-11;1!UBERON:0001259;5.84e-11;1!UBERON:0002394;1.58e-10;4!UBERON:0003928;1.58e-10;4!UBERON:0002680;3.69e-10;9!UBERON:0001895;3.69e-10;9!UBERON:0000058;2.96e-09;10!UBERON:0000365;1.63e-08;5!UBERON:0004733;9.63e-08;12!UBERON:0002028;9.63e-08;12!UBERON:0005910;3.10e-07;6!UBERON:0004732;3.50e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.60e-15,6;UBERON:0006215,4.60e-15,6;UBERON:0004913,3.76e-11,1;UBERON:0003703,3.76e-11,1;UBERON:0001174,3.76e-11,1;UBERON:0004914,3.76e-11,1;UBERON:0004645,6.14e-11,1;UBERON:0001256,6.14e-11,1;UBERON:0001259,6.14e-11,1;UBERON:0002294,2.78e-10,9;UBERON:0001173,2.78e-10,9;UBERON:0004912,2.78e-10,9;UBERON:0002680,3.16e-10,9;UBERON:0001895,3.16e-10,9;UBERON:0010092,3.16e-10,9;UBERON:0000365,1.43e-08,5;UBERON:0004733,8.58e-08,12;UBERON:0002028,8.58e-08,12;UBERON:0007277,8.58e-08,12;UBERON:0002394,2.61e-07,6;UBERON:0003928,2.61e-07,6;UBERON:0005910,2.78e-07,6;UBERON:0004732,3.15e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0.23486899728753,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.219500570817251,0,0,0.277765335475589,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0.141775097242386,0.985143749731331,0.871901815541886,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.492762936082855,0,0.116210378459959,0,0.802025881213139,0.0920809889358963,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,1.66215201785745,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.145016693914229,0,0,0.330569830721956,0.384380134730212,1.14851441245126,0.2023155617111,0.464845549297286,0.31481234683064,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0.384888450902048,1.34060455107157,1.08890984861323,0,0.43050537267123,1.68471475667626,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83031449570902,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0.920418142519393,0,0,1.43789361835723,0,0,0,0,0,0,0.371072392647405,0,0,0,0,0.568967241427498,0.508507300585533,0.236387681767936,0,0,0,0,0,3.05163472634166,1.87984741883082,3.84211904639612,0,0,0.278847488557207,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0,0,0,0,0,0.943615861729479,0,0.468528891450678,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0.832048038078832,0,0.0979923974143777,1.21882889212564,0,0,0,0,0,0,0,0,0.548167698587004,0.19871461170299,0.126621591911757,0.782205530939212,9.05794668842331,0,0,0,0,0,0,0.124252535565433,1.64985824231757,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,5.37362552494447,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0,0.310482014706917,0,0,0,0,0.235265819698172,0,0,0,0,0,0.568209015825267,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0.245772908753719,8.87510918106234,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.798169295285756,0.205116364240755,0,0.138314504928436,0,0,0.196295437002051,0.589848616738702,0.183428598521679,0.462102664601353,0,0,0,0,0,0,0,0,4.13997041407727,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0.339848664884159,0.131545547125698,0.354581522651905,0.556157009460346,0.235479278551542,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41998400876678,1.10777426186905,0,2.2910686854405,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0,0,0.437119121007915,0,0,0.235676547101626,0.392616934229891,0,0,0,0,0,0,0,3.52894871715692,0.802413666891683,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.724030971033267,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,2.11648498388534,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@PAPL | |||
}} |
Revision as of 23:10, 20 January 2014
Short description: | p3@PAPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PAPL_5end |
Coexpression cluster: | NA |
Association with transcript: | -42bp_to_ENST00000331256, NM_001004318, uc002oki.2_5end |
EntrezGene: | PAPL |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 2.65e-13 | 2 |
duct epithelial cell | 3.01e-13 | 3 |
branched duct epithelial cell | 3.01e-13 | 3 |
tracheal epithelial cell | 3.01e-13 | 3 |
tracheoblast | 3.01e-13 | 3 |
respiratory epithelial cell | 9.26e-12 | 13 |
bladder cell | 6.14e-11 | 1 |
lower urinary tract cell | 6.14e-11 | 1 |
epithelial cell of tracheobronchial tree | 5.37e-10 | 9 |
epithelial cell of lower respiratory tract | 5.37e-10 | 9 |
epithelial cell | 4.58e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.60e-15 | 6 |
rhombic lip | 4.60e-15 | 6 |
hepatopancreatic ampulla | 3.76e-11 | 1 |
extrahepatic bile duct | 3.76e-11 | 1 |
common bile duct | 3.76e-11 | 1 |
duodenal papilla | 3.76e-11 | 1 |
urinary bladder urothelium | 6.14e-11 | 1 |
wall of urinary bladder | 6.14e-11 | 1 |
mucosa of urinary bladder | 6.14e-11 | 1 |
biliary system | 2.78e-10 | 9 |
biliary tree | 2.78e-10 | 9 |
biliary bud | 2.78e-10 | 9 |
regional part of metencephalon | 3.16e-10 | 9 |
metencephalon | 3.16e-10 | 9 |
future metencephalon | 3.16e-10 | 9 |
urothelium | 1.43e-08 | 5 |
segmental subdivision of hindbrain | 8.58e-08 | 12 |
hindbrain | 8.58e-08 | 12 |
presumptive hindbrain | 8.58e-08 | 12 |
bile duct | 2.61e-07 | 6 |
digestive system duct | 2.61e-07 | 6 |
transitional epithelium | 2.78e-07 | 6 |
segmental subdivision of nervous system | 3.15e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 2.79e-11 | 1 |
mucinous cystadenocarcinoma | 2.79e-11 | 1 |
carcinoma | 2.68e-09 | 106 |
non-small cell lung carcinoma | 8.03e-09 | 5 |