FFCP PHASE1:Hg19::chr19:18893910..18893932,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C240 | |||
|description=CAGE_peak_at_chr19:18893910..18893932,- | |||
|id=chr19:18893910..18893932,- | |||
|ontology_enrichment_celltype=CL:0000136!7.43e-27!15;CL:0000153!2.58e-22!9;CL:0000447!2.58e-22!9;CL:0000667!7.23e-18!6;CL:0000058!7.23e-18!6;CL:0000138!7.23e-18!6;CL:0002334!4.40e-17!12;CL:0002580!3.40e-14!3;CL:0002615!5.24e-14!3;CL:0000327!5.41e-14!14;CL:0000499!6.72e-14!27;CL:0000135!1.04e-13!3;CL:0000386!1.04e-13!3;CL:0000388!1.04e-13!3;CL:0002579!1.18e-13!3;CL:0000057!1.13e-10!75;CL:0002617!4.56e-10!2;CL:0000325!4.24e-09!39;CL:0000055!1.15e-07!180;CL:0000134!3.25e-07!358;CL:0002320!6.31e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000138;1.75e-28;6!CL:0002334;7.06e-28;12!CL:0000153;7.23e-27;9!CL:0000447;7.23e-27;9!CL:0000136;5.14e-26;13!CL:0002580;3.05e-22;3!CL:0002615;6.43e-22;3!CL:0000135;2.12e-21;3!CL:0000388;2.12e-21;3!CL:0002579;2.20e-21;3!CL:0000499;1.95e-18;28!CL:0000327;6.00e-16;15!CL:0002617;1.77e-15;2!CL:0002616;2.33e-08;1!CL:0002581;3.21e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.84e-29,15;CL:0000058,1.61e-28,6;CL:0000138,1.61e-28,6;CL:0002334,7.50e-28,12;CL:0000153,6.60e-27,9;CL:0000447,6.60e-27,9;CL:0002580,3.05e-22,3;CL:0002615,6.21e-22,3;CL:0000135,1.91e-21,3;CL:0000388,1.91e-21,3;CL:0002579,2.36e-21,3;CL:0000499,1.81e-18,28;CL:0000327,5.68e-16,15;CL:0002617,1.77e-15,2;CL:0000057,7.01e-11,76;CL:0000134,1.20e-10,354;CL:0002320,2.40e-10,361;CL:0000219,2.76e-09,386;CL:0002616,2.50e-08,1;CL:0002581,3.33e-08,1;CL:0000048,5.52e-08,427;CL:0000723,8.36e-08,433;CL:0000034,1.43e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;6.24e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,5.43e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!6.77e-26!6;UBERON:0002358!6.77e-26!6;UBERON:0003684!6.77e-26!6;UBERON:0001178!6.77e-26!6;UBERON:0004457!8.38e-22!12;UBERON:0000042!8.38e-22!12;UBERON:0001443!5.55e-14!11;UBERON:0000043!1.04e-13!3;UBERON:0000310!4.33e-11!10;UBERON:0001013!3.32e-10!14;UBERON:0005406!1.13e-09!2;UBERON:0002384!3.52e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.72e-41;6!UBERON:0002358;1.72e-41;6!UBERON:0003684;1.72e-41;6!UBERON:0001178;1.72e-41;6!UBERON:0004457;5.05e-37;9!UBERON:0000042;5.05e-37;9!UBERON:0007846;2.12e-21;3!UBERON:0000043;2.12e-21;3!UBERON:0007845;2.12e-21;3!UBERON:0000310;6.71e-18;10!UBERON:0001443;2.94e-16;11!UBERON:0005406;7.06e-15;2!UBERON:0001013;4.51e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.78e-41,6;UBERON:0002358,1.78e-41,6;UBERON:0003684,1.78e-41,6;UBERON:0001178,1.78e-41,6;UBERON:0004457,1.37e-27,12;UBERON:0000042,1.37e-27,12;UBERON:0007846,1.91e-21,3;UBERON:0000043,1.91e-21,3;UBERON:0007845,1.91e-21,3;UBERON:0000310,6.71e-18,10;UBERON:0001443,2.95e-16,11;UBERON:0005406,7.84e-15,2;UBERON:0002384,5.61e-11,371;UBERON:0001013,4.82e-08,14 | |||
|phase1_expression=19.257908202679,18.8408461024065,9.02108186214215,24.0175916047513,4.46961094427288,6.10636966870258,10.1319951267324,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,3.00802746381534,5.93870727739377,23.858578411533,3.89307896242109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0.103052529238439,1.03056216018252,0.558350568994769,0,1.16924406193438,0,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,29.562975527278,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,14.1421450456703,12.5838818096211,20.2075267991813,5.38184426873944,7.16390148693385,3.37793234401576,4.45254199334973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9555068941673,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03018711554838,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,6.32391530883477,6.47045880083986,3.46101249699031,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0.653150243690884,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr19:18893910..18893932,- | |||
}} |
Revision as of 22:16, 20 January 2014
Short description: | p@chr19:18893910..18893932, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18893910..18893932, - |
Coexpression cluster: | C240_Adipocyte_Preadipocyte_Osteoblast_Chondrocyte_tenocyte_Synoviocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.84e-29 | 15 |
chondroblast | 1.61e-28 | 6 |
chondrocyte | 1.61e-28 | 6 |
preadipocyte | 7.50e-28 | 12 |
GAG secreting cell | 6.60e-27 | 9 |
carbohydrate secreting cell | 6.60e-27 | 9 |
preadipocyte of the breast | 3.05e-22 | 3 |
adipocyte of omentum tissue | 6.21e-22 | 3 |
fibrocyte | 1.91e-21 | 3 |
tendon cell | 1.91e-21 | 3 |
omentum preadipocyte | 2.36e-21 | 3 |
stromal cell | 1.81e-18 | 28 |
extracellular matrix secreting cell | 5.68e-16 | 15 |
adipocyte of breast | 1.77e-15 | 2 |
fibroblast | 7.01e-11 | 76 |
mesenchymal cell | 1.20e-10 | 354 |
connective tissue cell | 2.40e-10 | 361 |
motile cell | 2.76e-09 | 386 |
perirenal adipocyte cell | 2.50e-08 | 1 |
perirenal preadipocyte | 3.33e-08 | 1 |
multi fate stem cell | 5.52e-08 | 427 |
somatic stem cell | 8.36e-08 | 433 |
stem cell | 1.43e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.78e-41 | 6 |
peritoneum | 1.78e-41 | 6 |
abdominal cavity | 1.78e-41 | 6 |
visceral peritoneum | 1.78e-41 | 6 |
cavity lining | 1.37e-27 | 12 |
serous membrane | 1.37e-27 | 12 |
dense regular connective tissue | 1.91e-21 | 3 |
tendon | 1.91e-21 | 3 |
regular connective tissue | 1.91e-21 | 3 |
breast | 6.71e-18 | 10 |
chest | 2.95e-16 | 11 |
perirenal fat | 7.84e-15 | 2 |
connective tissue | 5.61e-11 | 371 |
adipose tissue | 4.82e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 5.43e-08 | 1 |