FFCP PHASE1:Hg19::chr19:16435423..16435484,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10365 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6347 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y5W3,Q8IUN4 | |||
|association_with_transcript=-166bp_to_ENST00000248071,NM_016270,uc002ndw.2_5end | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_5_at_KLF2_5end | |||
|id=chr19:16435423..16435484,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.69e-12!18;CL:0000789!5.69e-12!18;CL:0002420!5.69e-12!18;CL:0002419!5.69e-12!18;CL:0000790!5.69e-12!18;CL:0000084!8.17e-09!25;CL:0000827!8.17e-09!25;CL:0000625!1.77e-08!11;CL:0000542!1.26e-07!53;CL:0000051!1.26e-07!53;CL:0000838!1.64e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.43e-23;18!CL:0000789;6.43e-23;18!CL:0002419;6.43e-23;18!CL:0000084;1.93e-15;25!CL:0000624;3.63e-15;6!CL:0000625;4.94e-12;11!CL:0000542;2.74e-09;53!CL:0000623;1.30e-08;3!CL:0000226;4.44e-08;3!CL:0000842;4.44e-08;3!CL:0000898;5.49e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.03e-23,18;CL:0000789,3.03e-23,18;CL:0002420,3.03e-23,18;CL:0002419,3.03e-23,18;CL:0000790,3.03e-23,18;CL:0000838,1.79e-16,52;CL:0000542,4.81e-16,53;CL:0000051,4.81e-16,53;CL:0000084,1.15e-15,25;CL:0000827,1.15e-15,25;CL:0000624,4.60e-15,6;CL:0000625,2.15e-12,11;CL:0000738,1.20e-10,136;CL:0002087,1.30e-08,115;CL:0000623,1.35e-08,3;CL:0000825,1.35e-08,3;CL:0000226,2.48e-08,3;CL:0000842,2.48e-08,3;CL:0000898,6.72e-08,3;CL:0000037,1.08e-07,168;CL:0002031,5.21e-07,120;CL:0000988,6.81e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;6.43e-23;18!CL:0000051;2.74e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.50e-11!115;UBERON:0001049!1.19e-10!57;UBERON:0005068!1.19e-10!57;UBERON:0006241!1.19e-10!57;UBERON:0007135!1.19e-10!57;UBERON:0001017!4.27e-10!82;UBERON:0000955!1.46e-09!69;UBERON:0006238!1.46e-09!69;UBERON:0000073!2.15e-09!94;UBERON:0001016!2.15e-09!94;UBERON:0002780!4.47e-09!41;UBERON:0001890!4.47e-09!41;UBERON:0006240!4.47e-09!41;UBERON:0005743!8.11e-09!86;UBERON:0003080!1.35e-08!42;UBERON:0002616!1.76e-08!59;UBERON:0002020!9.07e-08!34;UBERON:0003528!9.07e-08!34;UBERON:0001893!1.82e-07!34;UBERON:0002791!3.34e-07!33;UBERON:0001869!4.28e-07!32 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.662794751455832,0,0,0,0,0.123121058076788,0.612002073732759,0.313454721478088,0,0,0.251085279189606,0,0.164201178899891,0.0787107813136792,1.57345710739562,0.383829398097213,1.39334510984468,0,0,0,0,0,1.46800219667424,1.10799081706375,2.80762226458198,3.90619567288533,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13365111283254,1.20118796110804,0,0,0.954053754535364,1.1384259382189,1.76171156811282,5.3518251937532,1.32171328579026,1.12101712596307,0.526768169550154,17.703879310245,33.405914833679,8.22405995998037,0.167186495390678,12.0591238654428,7.101717086021,7.79306913631645,0.334231370655521,1.17842362989935,1.10766947291811,0.812411591295047,0,0.780356085359269,0.328875809207352,0,0.289803085735052,13.7906503740716,7.75868401460168,8.36284190439814,0,2.68254345521345,2.40539211837841,1.01207876807801,1.59282707162048,1.30216690771284,0.950452044448374,0.752875595388864,1.4078527226986,1.24930726552346,0.473554504088034,1.64225599384209,1.41124720257313,4.54648332831962,15.7858600232251,0,0,0.511450247374121,0,0,0.289693037921647,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.523916301990851,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.597794722207204,0.117434498643765,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0.8231480226628,0,1.26755034821831,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,1.03664057770386,1.29707958075265,0.25248486685276,0.253991577168676,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0,0,5.12279976525011,9.05635814409973,6.16046574142792,0,0,0,0.502548796003046,0,0,0,0.414415513436035,0.36807447515742,0,0.542530047399471,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0.391602314925481,0,1.86091223510599,7.33428282783297,6.93729125722388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0.206082023295445,0.183138929636687,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0.54907405947211,0.117812402345686,0,0,0,0.975267478179181,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,1.31178950409327,0,0.30982349809975,0,0,0,0,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.714695326373367,0.411362273086194,1.29694662238543,1.08006287447623,0,0.106824071127473,0,1.22520107990516,0.185803175125719,0,0.0711418433484141,0.478278818186467,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.146508179271894,0.121360521749513,0.334330152832435,1.42068073403207,0,0.296964680832639,0,1.9882952955326,0.703347082052564,0,0,0.211125408127993,0.398495976502139,0,0.503865495708552,0.715880777515084,0.123084805461069,0,0,0.179021174675609,0,0.295930216910801,0,0,1.93866549219044,0.278304294485554,1.99613798001194,1.04171104434093,0.0874599999961957,0,0.1137934482855,0.254253650292766,0.472775363535873,1.72371686620732,0.291604613383254,0.347249989866585,1.77148277162768,0.482385754501632,0,0.221158519862449,0.886642856860642,0.438770794307945,1.0893846351899,0,0.846452843541768,0,0,0.448788222048861,0.217294743844016,0.31900115973192,0,0,0,0.31396051279005,0,0,0,0,0,0,0,2.28525931422807,0.424059214301822,0,0.995261931078505,0.0884575645033392,0.611030144933625,0.889563386041866,0.617819694732514,0.208843899010911,0.471807930864739,0,0.468528891450678,0,0,0,0.789168805698781,0,1.22429104652196,0.126373159256976,0,0.414752765588989,1.32930774541437,0.330991955875499,0,0,0,0.416024019039416,0,0,0,0.17472666824203,0.51595809741485,0.0967563312890851,0.0730893170861856,0,0,0,0.677942222341597,0.137041924646751,0,0.316553979779393,0.391102765469606,0.160317640503067,0.213452994739353,0.19980960958213,0.144090417154106,0.114536596165916,0,0,0,0,0,0,0,1.15580235960608,1.20084057741958,0.958337652243951,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,1.18112977817699,0.0846733320657845,1.59045937961861,0.272406812223151,1.76828463311521,1.10031549277787,0.415440338029185,0.674921674654501,0.77380195455795,0.42524689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| |||
|short_description=p5@KLF2 | |||
}} |
Revision as of 21:57, 20 January 2014
Short description: | p5@KLF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KLF2_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | -166bp_to_ENST00000248071, NM_016270, uc002ndw.2_5end |
EntrezGene: | KLF2 |
HGNC: | 6347 |
UniProt: | Q9Y5W3Q8IUN4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.03e-23 | 18 |
alpha-beta T cell | 3.03e-23 | 18 |
immature T cell | 3.03e-23 | 18 |
mature T cell | 3.03e-23 | 18 |
immature alpha-beta T cell | 3.03e-23 | 18 |
lymphoid lineage restricted progenitor cell | 1.79e-16 | 52 |
lymphocyte | 4.81e-16 | 53 |
common lymphoid progenitor | 4.81e-16 | 53 |
T cell | 1.15e-15 | 25 |
pro-T cell | 1.15e-15 | 25 |
CD4-positive, alpha-beta T cell | 4.60e-15 | 6 |
CD8-positive, alpha-beta T cell | 2.15e-12 | 11 |
leukocyte | 1.20e-10 | 136 |
nongranular leukocyte | 1.30e-08 | 115 |
natural killer cell | 1.35e-08 | 3 |
pro-NK cell | 1.35e-08 | 3 |
single nucleate cell | 2.48e-08 | 3 |
mononuclear cell | 2.48e-08 | 3 |
naive T cell | 6.72e-08 | 3 |
hematopoietic stem cell | 1.08e-07 | 168 |
hematopoietic lineage restricted progenitor cell | 5.21e-07 | 120 |
hematopoietic cell | 6.81e-07 | 177 |