FFCP PHASE1:Hg19::chr19:13051420..13051440,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C603 | |||
|description=CAGE_peak_at_chr19:13051420..13051440,+ | |||
|id=chr19:13051420..13051440,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.89e-20!679;CL:0000004!1.89e-20!679;CL:0000255!1.89e-20!679;CL:0000144!2.88e-20!625;CL:0000012!8.58e-20!682;CL:0002371!2.17e-19!591;CL:0000055!7.67e-15!180;CL:0000723!2.01e-11!436;CL:0000048!3.49e-11!430;CL:0000003!3.50e-11!722;CL:0000034!4.09e-11!444;CL:0000183!1.72e-10!59;CL:0002321!5.20e-10!248;CL:0000220!5.50e-10!246;CL:0000222!7.77e-10!119;CL:0000680!8.94e-10!57;CL:0000056!8.94e-10!57;CL:0000355!8.94e-10!57;CL:0000187!2.72e-09!54;CL:0000393!4.03e-09!60;CL:0000211!4.03e-09!60;CL:0000192!5.22e-09!42;CL:0000514!5.22e-09!42;CL:0000063!1.20e-07!578;CL:0000359!2.45e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000134;2.48e-07;55!CL:0000359;8.76e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.68e-11,433;CL:0000048,2.92e-11,427;CL:0000034,3.03e-11,441;CL:0002321,4.98e-10,250;CL:0000222,1.02e-09,121;CL:0000680,3.37e-09,58;CL:0000056,3.37e-09,58;CL:0000355,3.37e-09,58;CL:0000187,1.03e-08,55;CL:0000393,1.90e-08,61;CL:0000211,1.90e-08,61;CL:0000192,2.07e-08,43;CL:0000514,2.07e-08,43;CL:0000359,2.08e-07,32;CL:0000057,9.14e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!6.85e-11!143;UBERON:0000486!1.18e-10!82;UBERON:0000914!1.96e-10!83;UBERON:0002329!1.96e-10!83;UBERON:0003077!1.96e-10!83;UBERON:0003059!1.96e-10!83;UBERON:0007282!1.96e-10!83;UBERON:0009618!1.96e-10!83;UBERON:0007285!1.96e-10!83;UBERON:0004290!9.39e-10!70;UBERON:0001637!1.43e-08!42;UBERON:0003509!1.43e-08!42;UBERON:0004572!1.43e-08!42;UBERON:0003914!1.78e-08!118;UBERON:0001134!2.33e-08!61;UBERON:0002036!2.33e-08!61;UBERON:0003082!2.33e-08!61;UBERON:0000490!2.69e-08!138;UBERON:0002385!1.27e-07!63;UBERON:0001015!1.27e-07!63;UBERON:0000383!1.27e-07!63;UBERON:0001981!1.63e-07!60;UBERON:0007500!1.63e-07!60;UBERON:0004537!1.63e-07!60;UBERON:0006965!1.63e-07!60;UBERON:0004573!3.17e-07!33;UBERON:0004571!3.17e-07!33;UBERON:0002049!3.79e-07!79;UBERON:0007798!3.79e-07!79;UBERON:0004872!5.96e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.73e-07;42!UBERON:0003509;8.73e-07;42!UBERON:0004572;8.73e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.12e-10,78;UBERON:0000486,3.55e-10,83;UBERON:0005256,1.81e-09,122;UBERON:0000490,2.97e-09,148;UBERON:0002329,3.00e-09,71;UBERON:0003059,3.00e-09,71;UBERON:0007282,3.00e-09,71;UBERON:0004290,3.00e-09,71;UBERON:0009618,3.00e-09,71;UBERON:0007524,4.50e-09,73;UBERON:0003077,5.82e-09,72;UBERON:0007285,5.82e-09,72;UBERON:0003914,8.42e-09,117;UBERON:0001637,1.51e-08,42;UBERON:0003509,1.51e-08,42;UBERON:0004572,1.51e-08,42;UBERON:0000926,1.92e-08,315;UBERON:0004120,1.92e-08,315;UBERON:0006603,1.92e-08,315;UBERON:0001134,7.38e-08,62;UBERON:0002036,7.38e-08,62;UBERON:0003082,7.38e-08,62;UBERON:0007500,1.27e-07,59;UBERON:0001981,1.27e-07,59;UBERON:0004537,1.27e-07,59;UBERON:0006965,1.27e-07,59;UBERON:0002049,2.81e-07,78;UBERON:0007798,2.81e-07,78;UBERON:0004573,3.48e-07,33;UBERON:0004571,3.48e-07,33;UBERON:0003104,3.57e-07,160;UBERON:0009142,3.57e-07,160;UBERON:0002385,4.77e-07,64;UBERON:0001015,4.77e-07,64;UBERON:0000383,4.77e-07,64;UBERON:0004872,7.41e-07,83;UBERON:0000055,8.56e-07,68 | |||
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| |||
|short_description=p@chr19:13051420..13051440,+ | |||
}} |
Revision as of 21:34, 20 January 2014
Short description: | p@chr19:13051420..13051440, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13051420..13051440, + |
Coexpression cluster: | C603_Monocytederived_Hair_Aortic_Hepatocyte_Adipocyte_leiomyoma_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.68e-11 | 433 |
multi fate stem cell | 2.92e-11 | 427 |
stem cell | 3.03e-11 | 441 |
embryonic cell | 4.98e-10 | 250 |
mesodermal cell | 1.02e-09 | 121 |
muscle precursor cell | 3.37e-09 | 58 |
myoblast | 3.37e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.37e-09 | 58 |
muscle cell | 1.03e-08 | 55 |
electrically responsive cell | 1.90e-08 | 61 |
electrically active cell | 1.90e-08 | 61 |
smooth muscle cell | 2.07e-08 | 43 |
smooth muscle myoblast | 2.07e-08 | 43 |
vascular associated smooth muscle cell | 2.08e-07 | 32 |
fibroblast | 9.14e-07 | 76 |