FFCP PHASE1:Hg19::chr19:3381943..3381961,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4782 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7786 | |||
|TSSclassifier=not | |||
|UniProt=Q6FI30 | |||
|association_with_transcript=234bp_to_CR536507_5end | |||
|description=CAGE_peak_8_at_NFIC_5end | |||
|id=chr19:3381943..3381961,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002570;1.74e-11;8!CL:0002591;2.89e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,3.36e-11,8;CL:0002591,3.36e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.89e-07;1!UBERON:0008801;2.89e-07;1!UBERON:0005425;7.55e-07;1!UBERON:0004874;7.55e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.40e-08;3!DOID:127;1.40e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.86e-08,3;DOID:127,1.86e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;2.89e-07;1!UBERON:0001567;2.89e-07;1!UBERON:0000989;7.55e-07;1!UBERON:0000941;7.55e-07;1!UBERON:0001785;7.55e-07;1!UBERON:0002464;7.55e-07;1!UBERON:0004904;7.55e-07;1!UBERON:0008811;7.55e-07;1!UBERON:0001021;7.55e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002553,2.42e-07,61;UBERON:0001831,2.66e-07,1;UBERON:0001567,2.66e-07,1;UBERON:0008801,2.66e-07,1;UBERON:0000989,5.37e-07,1;UBERON:0008811,5.37e-07,1;UBERON:0006258,5.37e-07,1;UBERON:0005876,5.37e-07,1;UBERON:0004874,5.37e-07,1;UBERON:0000941,6.02e-07,1;UBERON:0001785,6.02e-07,1;UBERON:0002464,6.02e-07,1;UBERON:0004904,6.02e-07,1;UBERON:0001021,6.02e-07,1;UBERON:0003902,6.02e-07,1;UBERON:0005425,6.02e-07,1;UBERON:0003886,8.14e-07,54 | |||
|phase1_expression=0.181678379270557,1.2846031433459,0.422863212287913,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0,1.39560233594486,0,0,0.37129905888014,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.369363174230364,0,0.313454721478088,0,0.821246550437305,0.376627918784408,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0.401088894940283,0,0,0,0.257575567634187,0.290796477559129,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0.211255286311942,0,0,0.336985893439485,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.289648807765598,4.87613732627923,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0.221729397462564,0.43917392846563,0.654895377488563,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0.417989933073621,0.258416759169329,0,0.33472061276467,0.805658634218294,0,0,0,0.81014194788176,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0,0,0,0.653847612453835,0,0,0.234321431833797,0,0,0.149448680551801,0.469737994575059,0.161872944368132,0.561803226808994,0,0.245668634623536,0.309977343527296,0,0.494533858557114,0.910161361938026,1.43723628363248,0.168336113954066,0.625592599359821,0.277064115484183,0.438977620880838,0.30648779579902,0.751190294532984,0.113432183160021,0.358779271377724,0.427114777637135,0.211931901159562,0.300091096084402,0.309157587715317,0,0,0,0,0.252433774244115,0.184099797284599,0.646584227275248,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,0,0.354920400119532,0.337169380156203,0.964044119533928,0.441175890929576,0.217879444092406,0,0,0.196221465125346,0.38474715694639,0.738155454624648,0,0,0,1.26755034821831,0,0.590789906681404,0.882926198829301,0,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0.325808305310325,1.03993478527958,0,0,0,0,0,0.380508304469197,0,0.858486162094873,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0.829312462163088,0.144119953416961,0.12624243342638,0.126995788584338,0,0,1.71072446022705,0.205654985406647,0,0,0,0,0.07333828582095,0.387815147273333,3.57656445851882,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0.718874566474748,2.29723871668228,0,0,0.410952645100767,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0.167516265334349,0,0,2.99161459204025,0,0.36807447515742,0.500170521059677,0,0.207970861530807,1.78428988797162,0.630809660135739,0.585707074963566,0.601892199455438,0,0,0,0.368738337083406,0.173767228936166,0.391602314925481,0.686286847621712,0,0.431428401637234,0.213455115606889,0,0,0,0,0,0.841980283299221,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.348631135379878,0.120859449591622,0,0.0920809889358963,0.34444334449382,0.182091168006717,0.655622074797121,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.510281115829547,0,1.54227252690289,0,0.501689773854853,0.509752546090077,0,0,0,0,0,0,0,0.206082023295445,0.366277859273374,0.165018999841176,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.551346289938122,0.214840489736547,0.290033387828457,0.511359764496605,0,0.165284915360978,0.192190067365106,0,0.2023155617111,0,0,0,0.616067160352178,0,0.869932992075073,0,0,0,0.316379424718726,0,0,0,0,1.56989728039846,0.179872457583315,0.274537029736055,0.471249609382746,0.202182481573316,0,0,0.48763373908959,0,0,0.136499911407986,0.565621727814851,2.26016233240486,0.551365343546124,0.66343897524122,1.31535265576129,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.0982490410131212,0.35667105148125,0,0.844430541190656,0,0.75894634753143,1.39973888097993,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0,0.228234679033192,0.156679895773023,0,0.169291777801603,0.481764225311099,0.201799707191048,0,0.343505344755765,0,0,0,0.19538809540204,0.278406173895242,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0.102268682502155,0.123084805461069,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0.227586896570999,0.508507300585533,0.236387681767936,0,0.291604613383254,0,0,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0.21787692703798,0,0.153900517007594,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0,0.202203398942031,0,0.468528891450678,0.182454789215666,0,0,0.789168805698781,0,0.30607276163049,0.063186579628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| |||
|short_description=p8@NFIC | |||
}} |
Revision as of 20:30, 20 January 2014
Short description: | p8@NFIC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NFIC_5end |
Coexpression cluster: | NA |
Association with transcript: | 234bp_to_CR536507_5end |
EntrezGene: | NFIC |
HGNC: | 7786 |
UniProt: | Q6FI30 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 3.36e-11 | 8 |
smooth muscle cell of the pulmonary artery | 3.36e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
anatomical cavity | 2.42e-07 | 61 |
parotid gland | 2.66e-07 | 1 |
cheek | 2.66e-07 | 1 |
parotid gland primordium | 2.66e-07 | 1 |
penis | 5.37e-07 | 1 |
intromittent organ | 5.37e-07 | 1 |
lateral plate mesenchyme | 5.37e-07 | 1 |
undifferentiated genital tubercle | 5.37e-07 | 1 |
somatopleure | 5.37e-07 | 1 |
cranial nerve II | 6.02e-07 | 1 |
cranial nerve | 6.02e-07 | 1 |
nerve trunk | 6.02e-07 | 1 |
nerve connecting eye with brain | 6.02e-07 | 1 |
nerve | 6.02e-07 | 1 |
retinal neural layer | 6.02e-07 | 1 |
presumptive neural retina | 6.02e-07 | 1 |
body cavity precursor | 8.14e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.86e-08 | 3 |
leiomyoma | 1.86e-08 | 3 |